Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 6.2e-241 837.0 417 100.0
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 5.5e-197 691.0 477 73.2
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.3e-179 632.5 420 72.1
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 3.1e-176 622.1 463 65.2
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 5.3e-176 621.3 461 66.2
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 9.1e-176 620.5 467 64.7
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 5.9e-175 617.8 466 64.6
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 7.7e-175 617.5 464 64.0
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.7e-174 616.3 463 65.4
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 2.2e-174 615.9 466 65.7
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 2.9e-174 615.5 464 65.3
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.9e-174 615.5 463 65.4
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 8.5e-174 614.0 463 65.2
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 1.1e-173 613.6 462 64.7
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 2.5e-173 612.5 477 63.1
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 3.2e-173 612.1 477 62.7
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 5.5e-173 611.3 463 64.6
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 7.2e-173 610.9 466 62.7
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.2e-172 610.1 467 65.1
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 1.2e-172 610.1 469 64.0
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.2e-172 610.1 466 64.8
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.6e-172 609.8 463 63.9
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 6.1e-172 607.8 466 64.6
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 6.1e-172 607.8 466 63.9
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.4e-171 606.7 464 63.8
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 1.4e-171 606.7 460 64.8
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 2.3e-171 605.9 467 63.6
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 8.8e-171 604.0 474 62.2
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.2e-170 603.6 501 59.9
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 1.2e-170 603.6 464 64.0
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 3.4e-170 602.1 462 63.9
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 4.4e-170 601.7 477 61.0
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 9.8e-170 600.5 464 63.1
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.3e-169 600.1 463 63.9
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.7e-169 599.7 470 62.6
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.7e-169 599.7 498 61.6
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 2.8e-169 599.0 401 74.1
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 4.8e-169 598.2 476 61.1
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 6.3e-169 597.8 463 63.1
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 6.3e-169 597.8 463 63.5
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 8.3e-169 597.4 463 62.6
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.8e-168 596.3 466 62.2
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 2.4e-168 595.9 539 57.7
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 3.1e-168 595.5 469 63.5
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 5.4e-168 594.7 466 62.2
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 9.1e-168 594.0 463 63.1
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 1.2e-167 593.6 416 69.5
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 3.5e-167 592.0 490 61.0
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.9e-165 586.3 507 57.6
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 2.5e-165 585.9 493 59.4
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 3.2e-165 585.5 466 63.1
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.2e-163 578.2 499 56.9
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.4e-162 575.5 496 57.3
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 4.4e-162 575.1 462 59.7
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 8.3e-161 570.9 464 59.9
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.8e-160 569.7 463 59.8
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 1.8e-160 569.7 545 55.6
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 1.6e-159 566.6 500 57.2
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.6e-159 566.6 461 61.4
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 8.6e-158 560.8 462 59.7
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 6.1e-156 554.7 476 59.9
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 6.8e-155 551.2 461 58.4
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 8.9e-155 550.8 477 59.3
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 5.7e-154 548.1 459 56.9
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.9e-150 535.4 463 57.7
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.1e-149 533.9 401 64.1
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.1e-149 533.9 401 64.1
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 1.5e-149 533.5 402 65.4
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 6.8e-147 524.6 418 62.9
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 3.7e-145 518.8 393 65.1
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.3e-139 499.6 381 63.3
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.3e-137 493.8 417 57.8
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 7.3e-133 478.0 381 61.2
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.7e-129 466.8 365 64.9
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 2.9e-129 466.1 517 49.9
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 3.4e-122 442.6 368 63.3
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 3.3e-117 426.0 325 63.1
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 3.6e-116 422.5 466 47.9
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 6.9e-115 418.3 331 63.1
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.2e-103 380.9 373 54.4
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 3.4e-90 336.3 266 62.8
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 3.8e-73 279.6 182 70.3
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 3.1e-67 260.0 168 70.8
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.7e-60 237.7 151 74.8
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 8.0e-55 218.8 119 87.4
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.1e-43 181.8 402 29.4
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 1.1e-40 171.8 204 50.0
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 9.5e-40 168.7 135 63.0
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.2e-26 125.2 449 26.5
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.0e-17 94.0 81 55.6
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 6.2e-15 86.3 346 25.4
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 8.1e-15 85.9 335 26.6
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 2.7e-10 70.9 386 22.5
SGA_v2.0_scaffold68G22835 Striga asiatica HOM05D002685 ORTHO05D001487 1.5e-08 65.1 78 43.6
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 3.3e-08 63.9 57 61.4
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 3.1e-06 57.4 349 22.1


User provided reference genes

Program Settings