Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold227G43235 Striga asiatica HOM05D005296 ORTHO05D006452 7.2e-74 280.4 134 100.0
SGA_v2.0_scaffold119G32698 Striga asiatica HOM05D005296 ORTHO05D006452 1.8e-48 196.1 135 75.6
SGA_v2.0_scaffold91G28037 Striga asiatica HOM05D005296 ORTHO05D006452 4.1e-45 184.9 139 71.2
Migut.N00068 Erythranthe guttata HOM05D005296 ORTHO05D006452 4.2e-42 174.9 135 67.4
Oeu028323.1 Olea europaea HOM05D005296 ORTHO05D006452 1.2e-41 173.3 135 65.2
unitig_22.g6340 Utricularia gibba HOM05D005296 ORTHO05D006452 1.2e-41 173.3 135 65.2
MSTRG.24808 Avicennia marina HOM05D005296 ORTHO05D006452 1.4e-40 169.9 139 63.3
Oeu033815.1 Olea europaea HOM05D005296 ORTHO05D006452 3.4e-39 165.2 139 62.6
TAR633G2374 Trochodendron aralioides HOM05D005296 ORTHO05D006452 4.9e-38 161.4 135 63.0
GSVIVG01035092001 Vitis vinifera HOM05D005296 ORTHO05D006452 3.2e-37 158.7 135 61.5
Sopen12g034070 Solanum pennellii HOM05D005296 ORTHO05D006452 1.2e-36 156.8 135 60.0
Cc03_g01400 Coffea canephora HOM05D005296 ORTHO05D006452 1.6e-36 156.4 135 60.0
CAN.G484.51 Capsicum annuum HOM05D005296 ORTHO05D006452 2.0e-36 156.0 135 57.8
PGSC0003DMG400004702 Solanum tuberosum HOM05D005296 ORTHO05D006452 3.5e-36 155.2 135 58.5
Solyc12g099400.2 Solanum lycopersicum HOM05D005296 ORTHO05D006452 5.9e-36 154.5 135 59.3
HanXRQChr03g0083871 Helianthus annuus HOM05D005296 ORTHO05D006452 3.9e-35 151.8 139 58.3
MBI19_g08248_MAGBIO Magnolia biondii HOM05D005296 ORTHO05D006452 3.9e-35 151.8 135 60.0
Peaxi162Scf03294g00016 Petunia axillaris HOM05D005296 ORTHO05D006452 6.6e-35 151.0 134 59.0
Os05g0358400 Oryza sativa ssp. japonica HOM05D005296 ORTHO05D006452 2.5e-34 149.1 135 58.5
Nitab4.5_0003484g0020 Nicotiana tabacum HOM05D005296 ORTHO05D006452 4.3e-34 148.3 135 57.0
Hma1.2p1_1352F.1_g277550 Hydrangea macrophylla HOM05D005296 ORTHO05D006452 5.6e-34 147.9 134 56.7
Aqoxy5G00802 Aquilegia oxysepala HOM05D005296 ORTHO05D006452 7.3e-34 147.5 135 57.8
vmacro08101 Vaccinium macrocarpon HOM05D005296 ORTHO05D006452 7.3e-34 147.5 135 58.5
Glyma.15G152600 Glycine max HOM05D005296 ORTHO05D006452 2.8e-33 145.6 135 57.0
Cpa.g.sc9.118 Carica papaya HOM05D005296 ORTHO05D006452 4.7e-33 144.8 135 57.0
FAN12G2682 Fragaria x ananassa HOM05D005296 ORTHO05D006452 4.7e-33 144.8 133 60.2
Phvul.009G251800 Phaseolus vulgaris HOM05D005296 ORTHO05D006452 4.7e-33 144.8 135 58.5
VMungo1309G1137 Vigna mungo HOM05D005296 ORTHO05D006452 6.2e-33 144.4 135 57.8
Lj3A826T78 Lonicera japonica HOM05D005296 ORTHO05D006452 8.0e-33 144.1 152 53.9
Carub.0007s2556 Capsella rubella HOM05D005296 ORTHO05D006452 1.0e-32 143.7 135 57.0
TPR.G24643 Trifolium pratense HOM05D005296 ORTHO05D006452 1.0e-32 143.7 135 57.8
AL7G39130 Arabidopsis lyrata HOM05D005296 ORTHO05D006452 1.4e-32 143.3 135 57.0
PSO832G0676 Papaver somniferum HOM05D005296 ORTHO05D006452 1.4e-32 143.3 136 57.4
Psat1g156080 Pisum sativum HOM05D005296 ORTHO05D006452 1.4e-32 143.3 135 57.8
Potri.010G006000 Populus trichocarpa HOM05D005296 ORTHO05D006452 1.4e-32 143.3 135 57.8
Atru.chr4.2920 Acer truncatum HOM05D005296 ORTHO05D006452 3.1e-32 142.1 135 57.0
Gorai.002G028900 Gossypium raimondii HOM05D005296 ORTHO05D006452 4.0e-32 141.7 135 56.3
Medtr2g435540 Medicago truncatula HOM05D005296 ORTHO05D006452 8.9e-32 140.6 135 56.3
QL06p010871 Quercus lobata HOM05D005296 ORTHO05D006452 8.9e-32 140.6 134 57.5
Sc13g0006220 Simmondsia chinensis HOM05D005296 ORTHO05D006452 8.9e-32 140.6 135 57.0
Aa31LG10G6140 Aethionema arabicum HOM05D005296 ORTHO05D006452 1.2e-31 140.2 135 55.6
GSVIVG01035093001 Vitis vinifera HOM05D005296 ORTHO05D006452 1.2e-31 140.2 135 54.8
ECA240G3796 Erigeron canadensis HOM05D002249 ORTHO05D000452 1.5e-31 139.8 135 56.3
BolC7t45282H Brassica oleracea HOM05D005296 ORTHO05D006452 2.0e-31 139.4 135 54.8
Thecc.04G290700 Theobroma cacao HOM05D005296 ORTHO05D006452 2.0e-31 139.4 135 56.3
Ca_01907_v3 Cicer arietinum L. HOM05D005296 ORTHO05D006452 2.6e-31 139.0 135 56.3
THA.LOC104821787 Tarenaya hassleriana HOM05D005296 ORTHO05D006452 2.6e-31 139.0 135 54.8
AT4G16060 Arabidopsis thaliana HOM05D005296 ORTHO05D006452 3.4e-31 138.7 135 56.3
MD16G1162300 Malus domestica HOM05D005296 ORTHO05D006452 3.4e-31 138.7 135 57.0
A03p49510 Brassica napus HOM05D005296 ORTHO05D006452 4.4e-31 138.3 135 54.8
Haze_01146 Corylus avellana HOM05D005296 ORTHO05D006452 5.8e-31 137.9 135 55.6
Sp7g14530 Schrenkiella parvula HOM05D005296 ORTHO05D006452 5.8e-31 137.9 135 54.1
BcaC06g32977 Brassica carinata HOM05D005296 ORTHO05D006452 7.5e-31 137.5 135 54.8
Gohir.D01G023502 Gossypium hirsutum HOM05D005296 ORTHO05D006452 7.5e-31 137.5 135 54.8
Zm00001eb346400 Zea mays HOM05D005296 ORTHO05D006452 9.8e-31 137.1 135 54.1
Duzib151G0219 Durio zibethinus HOM05D005296 ORTHO05D006452 1.3e-30 136.7 135 55.6
Lj6g0024924 Lotus japonicus HOM05D005296 ORTHO05D006452 1.3e-30 136.7 135 54.1
Gohir.A01G033200 Gossypium hirsutum HOM05D005296 ORTHO05D006452 1.7e-30 136.3 135 54.8
Manes.15G009300 Manihot esculenta HOM05D005296 ORTHO05D006452 1.7e-30 136.3 135 54.8
BcaC06g33432 Brassica carinata HOM05D005296 ORTHO05D006452 2.2e-30 136.0 135 53.3
BcaC06g33433 Brassica carinata HOM05D005296 ORTHO05D006452 2.2e-30 136.0 135 53.3
AUR62035079 Chenopodium quinoa HOM05D005296 ORTHO05D006452 2.2e-30 136.0 132 54.5
C07p47580 Brassica napus HOM05D005296 ORTHO05D006452 3.7e-30 135.2 135 53.3
CARHR290680 Cardamine hirsuta HOM05D005296 ORTHO05D006452 3.7e-30 135.2 135 54.1
Prupe.1G129900 Prunus persica HOM05D005296 ORTHO05D006452 3.7e-30 135.2 139 56.1
FvH4_4g18820 Fragaria vesca HOM05D005296 ORTHO05D006452 4.9e-30 134.8 135 55.6
FAN07G1138 Fragaria x ananassa HOM05D005296 ORTHO05D006452 4.9e-30 134.8 135 55.6
FAN17G2193 Fragaria x ananassa HOM05D005296 ORTHO05D006452 4.9e-30 134.8 135 55.6
Lalb_Chr15g0089391 Lupinus albus HOM05D005296 ORTHO05D006452 6.4e-30 134.4 135 53.3
SEGI_03423 Sequoiadendron giganteum HOM05D005296 ORTHO05D006452 6.4e-30 134.4 135 51.1
arahy.Tifrunner.gnm1.ann1.GJ345V Arachis hypogaea HOM05D005296 ORTHO05D006452 8.3e-30 134.0 135 53.3
TWI09G1158 Tripterygium wilfordii HOM05D005296 ORTHO05D006452 8.3e-30 134.0 135 54.8
Thhalv10025823m.g Eutrema salsugineum HOM05D005296 ORTHO05D006452 1.1e-29 133.7 135 53.3
ATR0730G096 Amborella trichopoda HOM05D005296 ORTHO05D006452 1.4e-29 133.3 133 52.6
Sabra10G0005100 Salix brachista HOM05D005296 ORTHO05D006452 1.4e-29 133.3 132 54.5
MELO3C021302.2 Cucumis melo HOM05D005296 ORTHO05D006452 1.9e-29 132.9 135 53.3
SalBow5G1780 Salvia bowleyana HOM05D005296 ORTHO05D006452 1.9e-29 132.9 155 51.0
EL10Ac3g04942 Beta vulgaris HOM05D005296 ORTHO05D006452 3.2e-29 132.1 135 51.9
PGR031G1375 Punica granatum HOM05D005296 ORTHO05D006452 3.2e-29 132.1 135 56.3
Ca_21474_v3 Cicer arietinum L. HOM05D005296 ORTHO05D006452 4.1e-29 131.7 135 51.1
CsaV3_6G022690 Cucumis sativus L. HOM05D005296 ORTHO05D006452 5.4e-29 131.3 135 51.9
AUR62016165 Chenopodium quinoa HOM05D005296 ORTHO05D006452 7.0e-29 131.0 132 53.0
CsaV3_6G022680 Cucumis sativus L. HOM05D005296 ORTHO05D006452 7.0e-29 131.0 135 51.9
VMungo1215G1937 Vigna mungo HOM05D005296 ORTHO05D006452 9.2e-29 130.6 135 51.9
Cfa015446 Carpinus fangiana HOM05D005296 ORTHO05D006452 1.6e-28 129.8 135 54.8
RcHm_v2.0_Chr4g0423631 Rosa chinensis HOM05D005296 ORTHO05D006452 1.6e-28 129.8 135 53.3
Ciclev10005508m.g Citrus clementina HOM05D005296 ORTHO05D006452 2.0e-28 129.4 132 53.8
Sed0027436 Sechium edule HOM05D005296 ORTHO05D006452 2.0e-28 129.4 135 52.6
CiPaw.01G144600 Carya illinoinensis HOM05D005296 ORTHO05D006452 2.7e-28 129.0 135 54.8
CsaV3_6G022700 Cucumis sativus L. HOM05D005296 ORTHO05D006452 4.6e-28 128.3 135 51.9
Nn3g21572 Nelumbo nucifera HOM05D005296 ORTHO05D006452 4.6e-28 128.3 135 54.8
Nitab4.5_0000570g0290 Nicotiana tabacum HOM05D005296 ORTHO05D006452 7.8e-28 127.5 120 55.0
Eucgr.A01317 Eucalyptus grandis HOM05D005296 ORTHO05D006452 1.3e-27 126.7 135 51.1
SGA_v2.0_scaffold146G36237 Striga asiatica HOM05D005296 ORTHO05D006452 2.3e-27 125.9 125 51.2
BraA03t14050Z Brassica rapa HOM05D005296 ORTHO05D006452 3.9e-27 125.2 140 50.7
Dinv29712 Davidia involucrata HOM05D005296 ORTHO05D000287 5.0e-27 124.8 128 53.9
C07p47550 Brassica napus HOM05D005296 ORTHO05D006452 1.1e-26 123.6 156 46.2
arahy.Tifrunner.gnm1.ann1.5R3I64 Arachis hypogaea HOM05D005296 ORTHO05D006452 1.5e-26 123.2 135 47.4
ATR1127G052 Amborella trichopoda HOM05D005296 ORTHO05D006452 1.9e-26 122.9 136 48.5
arahy.Tifrunner.gnm1.ann1.28UQCP Arachis hypogaea HOM05D005296 ORTHO05D006452 1.9e-26 122.9 135 47.4
Glyma.07G244600 Glycine max HOM05D005296 ORTHO05D006452 1.9e-26 122.9 135 48.1
Actinidia40306 Actinidia chinensis HOM05D005296 ORTHO05D006452 5.6e-26 121.3 133 49.6
Medtr4g120420 Medicago truncatula HOM05D005296 ORTHO05D006452 5.6e-26 121.3 135 46.7
Phvul.003G108300 Phaseolus vulgaris HOM05D005296 ORTHO05D006452 7.3e-26 120.9 135 48.9
Lj4g0000030 Lotus japonicus HOM05D005296 ORTHO05D006452 9.5e-26 120.6 135 45.9
Lalb_Chr07g0182261 Lupinus albus HOM05D005296 ORTHO05D006452 1.2e-25 120.2 134 46.3
ATR1131G025 Amborella trichopoda HOM05D005296 ORTHO05D006452 3.6e-25 118.6 134 46.3
Psat4g024760 Pisum sativum HOM05D005296 ORTHO05D006452 8.1e-25 117.5 135 45.9
TPR.G22773 Trifolium pratense HOM05D005296 ORTHO05D006452 1.1e-24 117.1 129 47.3
Rhsim04G0228000 Rhododendron simsii HOM05D005296 ORTHO05D006452 1.8e-24 116.3 156 46.2
ATR0916G003 Amborella trichopoda HOM05D005296 ORTHO05D006452 8.9e-24 114.0 136 43.4
ClCG06G004890 Citrullus lanatus HOM05D005296 ORTHO05D006452 1.2e-23 113.6 133 51.1
Pp3c24_6150 Physcomitrium patens HOM05D005296 ORTHO05D006452 2.0e-23 112.8 136 47.1
DCAR_002489 Daucus carota HOM05D005296 ORTHO05D006452 2.6e-23 112.5 113 53.1
SMO367G1004 Selaginella moellendorffii HOM05D005296 ORTHO05D006452 2.2e-22 109.4 137 44.5
Mapoly0019s0068 Marchantia polymorpha HOM05D005296 ORTHO05D006452 3.7e-22 108.6 131 48.1
COL.COLO4_03630 Corchorus olitorius HOM05D005296 ORTHO05D006452 1.2e-20 103.6 134 50.7
Psat4g063800 Pisum sativum HOM05D005296 ORTHO05D006452 4.6e-20 101.7 120 45.0
AagrBONN_evm.TU.Sc2ySwM_228.710 Anthoceros agrestis HOM05D005296 ORTHO05D006452 1.7e-19 99.8 135 43.0
Duzib212G0376 Durio zibethinus HOM05D005296 ORTHO05D006452 1.5e-18 96.7 127 45.7
CSS0013365 Camellia sinensis var. sinensis HOM05D005296 ORTHO05D006452 9.5e-18 94.0 126 47.6
Ciclev10024287m.g Citrus clementina HOM05D005296 ORTHO05D006452 2.8e-17 92.4 135 42.2
arahy.Tifrunner.gnm1.ann1.GS2NMQ Arachis hypogaea HOM05D005296 ORTHO05D006452 9.9e-15 84.0 51 76.5
Lsat_1_v5_gn_6_76180 Lactuca sativa HOM05D002249 ORTHO05D002443 6.4e-14 81.3 129 40.3
MELO3C021303.2 Cucumis melo HOM05D005296 ORTHO05D006452 4.1e-13 78.6 125 40.0
CDE08G0885 Ceratophyllum demersum HOM05D005296 ORTHO05D006452 2.3e-11 72.8 82 46.3
SHI00197 Sapria himalayana HOM05D005296 ORTHO05D006452 1.5e-10 70.1 57 57.9
Cre12.g494250 Chlamydomonas reinhardtii HOM05D005296 ORTHO05D006452 3.3e-10 68.9 134 34.3
Hund03087 Selenicereus undatus HOM05D005296 ORTHO05D006452 7.3e-10 67.8 49 65.3
FAN12G3138 Fragaria x ananassa HOM05D005296 ORTHO05D006452 1.2e-09 67.0 57 56.1
CBR_g37153 Chara braunii HOM05D005296 ORTHO05D006452 1.8e-08 63.2 187 28.9
HPP92_006907 Vanilla planifolia HOM05D005296 ORTHO05D006452 4.0e-08 62.0 47 59.6
PGR031G0664 Punica granatum HOM05D005296 ORTHO05D006452 2.2e-06 56.2 139 36.7


User provided reference genes

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