Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 4.1e-12 75.1 37 100.0
SGA_v2.0_scaffold246G44799 Striga asiatica HOM05D008359 ORTHO05D010300 1.5e-09 66.6 34 94.1
Migut.N00029 Erythranthe guttata HOM05D008359 ORTHO05D010300 5.6e-09 64.7 35 88.6
Carub.0001s3705 Capsella rubella HOM05D008359 ORTHO05D010300 1.6e-08 63.2 38 84.2
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 1.6e-08 63.2 38 84.2
AL1G54480 Arabidopsis lyrata HOM05D008359 ORTHO05D010300 4.7e-08 61.6 38 81.6
AT1G47970 Arabidopsis thaliana HOM05D008359 ORTHO05D010300 4.7e-08 61.6 38 81.6
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 4.7e-08 61.6 38 81.6
Aa31LG10G5820 Aethionema arabicum HOM05D000167 ORTHO05D000465 8.1e-08 60.8 32 93.8
Oeu044729.1 Olea europaea HOM05D008359 ORTHO05D010300 8.1e-08 60.8 32 93.8
Prupe.1G113500 Prunus persica HOM05D008359 ORTHO05D010300 8.1e-08 60.8 32 87.5
unitig_749.g13356 Utricularia gibba HOM05D008359 ORTHO05D010300 1.1e-07 60.5 37 78.4
BcaC08g42993 Brassica carinata HOM05D008359 ORTHO05D010300 1.4e-07 60.1 38 76.3
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 1.4e-07 60.1 38 76.3
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 1.4e-07 60.1 38 76.3
BcaB07g33802 Brassica carinata HOM05D008359 ORTHO05D010300 2.3e-07 59.3 31 93.5
CANSAT78G0680 Cannabis sativa HOM05D008359 ORTHO05D010300 2.3e-07 59.3 30 90.0
Nitab4.5_0000289g0010 Nicotiana tabacum HOM05D008359 ORTHO05D010300 2.3e-07 59.3 32 87.5
BolC6t35360H Brassica oleracea HOM05D008359 ORTHO05D010300 3.1e-07 58.9 38 76.3
Haze_01345 Corylus avellana HOM05D008359 ORTHO05D010300 3.1e-07 58.9 30 90.0
FAN07G0737 Fragaria x ananassa HOM05D008359 ORTHO05D010300 4.0e-07 58.5 32 84.4
PGR031G3777 Punica granatum HOM05D008359 ORTHO05D010300 4.0e-07 58.5 30 90.0
RcHm_v2.0_Chr4g0425941 Rosa chinensis HOM05D008359 ORTHO05D010300 4.0e-07 58.5 32 84.4
MSTRG.27929 Avicennia marina HOM05D008359 ORTHO05D010300 5.2e-07 58.2 37 75.7
MD16G1149800 Malus domestica HOM05D008359 ORTHO05D010300 5.2e-07 58.2 32 87.5
Nitab4.5_0004298g0050 Nicotiana tabacum HOM05D008359 ORTHO05D010300 5.2e-07 58.2 35 85.7
Sabra10G0114500 Salix brachista HOM05D008359 ORTHO05D010300 5.2e-07 58.2 30 90.0
CiPaw.02G072800 Carya illinoinensis HOM05D008359 ORTHO05D010300 6.8e-07 57.8 31 90.3
FAN12G0153 Fragaria x ananassa HOM05D008359 ORTHO05D010300 1.2e-06 57.0 30 86.7
MBI19_g03271_MAGBIO Magnolia biondii HOM05D008359 ORTHO05D010300 1.2e-06 57.0 37 83.8
C06p02350 Brassica napus HOM05D008359 ORTHO05D010300 1.5e-06 56.6 38 76.3
Lj3P834T33 Lonicera japonica HOM05D008359 ORTHO05D010300 1.5e-06 56.6 29 89.7
MD13G1149500 Malus domestica HOM05D008359 ORTHO05D010300 1.5e-06 56.6 31 87.1
Duzib212G0105 Durio zibethinus HOM05D008359 ORTHO05D010300 2.0e-06 56.2 31 83.9
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 2.0e-06 56.2 32 84.4
TAR633G1589 Trochodendron aralioides HOM05D008359 ORTHO05D010300 3.4e-06 55.5 36 77.8
FAN04G0049 Fragaria x ananassa HOM05D024256 ORTHO05D010300 4.4e-06 55.1 31 80.6
FvH4_4g20460 Fragaria vesca HOM05D008359 ORTHO05D010300 5.8e-06 54.7 29 86.2
Manes.03G207300 Manihot esculenta HOM05D008359 ORTHO05D010300 5.8e-06 54.7 29 86.2
Nn3g21784 Nelumbo nucifera HOM05D008359 ORTHO05D010300 5.8e-06 54.7 32 84.4
Thecc.04G305300 Theobroma cacao HOM05D008359 ORTHO05D010300 5.8e-06 54.7 27 92.6
Atru.chr4.3060 Acer truncatum HOM05D008359 ORTHO05D010300 9.9e-06 53.9 29 86.2
CSS0020578 Camellia sinensis var. sinensis HOM05D008359 ORTHO05D010300 9.9e-06 53.9 28 89.3


User provided reference genes

Program Settings