Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 0.0e+00 2748.0 1419 100.0
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 0.0e+00 1631.3 1128 76.9
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 0.0e+00 1533.5 1177 70.5
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 0.0e+00 1532.7 1183 69.9
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 0.0e+00 1429.8 1180 65.7
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 0.0e+00 1420.6 1150 65.5
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 0.0e+00 1420.6 1168 65.6
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 0.0e+00 1411.4 1168 65.2
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 0.0e+00 1409.8 1168 65.2
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 0.0e+00 1409.4 1170 64.1
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 0.0e+00 1377.1 1160 63.8
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 0.0e+00 1376.7 1149 64.1
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 0.0e+00 1372.5 1165 63.3
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 0.0e+00 1370.5 1147 64.3
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 0.0e+00 1362.8 1159 62.9
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 0.0e+00 1361.3 1160 62.3
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 0.0e+00 1354.0 1173 62.1
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 0.0e+00 1350.9 1121 63.6
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 0.0e+00 1350.5 1152 62.8
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 0.0e+00 1341.3 1156 62.2
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 0.0e+00 1334.7 1149 62.1
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 0.0e+00 1328.2 1171 60.7
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 0.0e+00 1328.2 1121 62.9
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 0.0e+00 1322.8 1150 62.0
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 0.0e+00 1320.4 1153 62.4
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 0.0e+00 1319.3 1109 63.0
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 0.0e+00 1315.8 1157 62.0
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 0.0e+00 1314.7 1153 60.9
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 0.0e+00 1308.5 1160 60.6
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 0.0e+00 1306.2 1159 60.4
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 0.0e+00 1305.4 1181 60.1
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 0.0e+00 1305.4 1141 61.8
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 0.0e+00 1300.0 1162 60.9
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 0.0e+00 1297.7 1157 60.8
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 0.0e+00 1297.3 1177 59.3
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 0.0e+00 1296.2 1156 60.7
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 0.0e+00 1294.3 1158 61.0
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 0.0e+00 1294.3 1130 61.4
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 0.0e+00 1288.9 1150 60.4
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 0.0e+00 1282.3 1159 59.7
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 0.0e+00 1281.2 1149 60.8
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 0.0e+00 1278.8 1152 59.4
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 0.0e+00 1278.1 1162 59.4
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 0.0e+00 1276.2 1148 59.6
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 0.0e+00 1275.4 1152 59.1
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 0.0e+00 1274.6 1185 60.3
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 0.0e+00 1273.8 1152 59.9
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 0.0e+00 1271.1 1153 59.2
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 0.0e+00 1268.1 1170 58.4
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 0.0e+00 1267.7 1097 62.8
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 0.0e+00 1266.9 1155 58.6
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 0.0e+00 1266.9 1171 58.1
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 0.0e+00 1265.0 1172 59.1
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 0.0e+00 1264.6 1154 60.7
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 0.0e+00 1264.2 1176 58.2
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 0.0e+00 1258.4 1090 62.4
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 0.0e+00 1254.2 1134 59.9
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 0.0e+00 1253.0 1165 58.6
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 0.0e+00 1253.0 1165 58.6
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 0.0e+00 1244.2 1179 57.7
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 0.0e+00 1243.0 1195 57.6
CAN.G371.44 Capsicum annuum HOM05D004348 ORTHO05D006191 0.0e+00 1242.6 965 67.7
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 0.0e+00 1241.5 1119 60.9
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 0.0e+00 1233.4 1158 58.2
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 0.0e+00 1232.6 1099 61.4
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 0.0e+00 1231.1 1158 58.1
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 0.0e+00 1226.5 1179 57.8
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 0.0e+00 1225.3 1187 56.5
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 0.0e+00 1224.9 1177 57.3
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 0.0e+00 1223.0 1214 57.2
Actinidia15256 Actinidia chinensis HOM05D004348 ORTHO05D006191 0.0e+00 1219.1 1082 60.9
Dinv35980 Davidia involucrata HOM05D004348 ORTHO05D006191 0.0e+00 1213.7 933 68.9
CsaV3_4G034150 Cucumis sativus L. HOM05D004348 ORTHO05D006191 0.0e+00 1199.1 972 63.6
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 0.0e+00 1198.7 1122 58.1
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 0.0e+00 1195.6 1121 59.0
Ciclev10000175m.g Citrus clementina HOM05D004348 ORTHO05D006191 0.0e+00 1182.9 962 63.4
Sed0015301 Sechium edule HOM05D004348 ORTHO05D006191 0.0e+00 1174.1 964 63.8
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 0.0e+00 1169.5 1189 53.6
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 0.0e+00 1167.5 1167 56.2
Gohir.A01G118500 Gossypium hirsutum HOM05D004348 ORTHO05D006191 0.0e+00 1166.0 960 63.4
Dinv39334 Davidia involucrata HOM05D004348 ORTHO05D006191 0.0e+00 1143.3 980 64.5
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 0.0e+00 1137.9 1155 55.8
Carub.0007s0605 Capsella rubella HOM05D004348 ORTHO05D006191 0.0e+00 1130.2 962 61.1
Nitab4.5_0005301g0040 Nicotiana tabacum HOM05D004348 ORTHO05D006191 0.0e+00 1127.1 956 64.4
AT4G34310 Arabidopsis thaliana HOM05D004348 ORTHO05D006191 0.0e+00 1124.8 958 61.3
CARHR242470 Cardamine hirsuta HOM05D004348 ORTHO05D006191 0.0e+00 1113.2 973 60.1
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 0.0e+00 1112.4 1057 57.6
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 0.0e+00 1112.1 1137 55.3
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 0.0e+00 1095.9 1164 53.0
ECA232G4920 Erigeron canadensis HOM05D004348 ORTHO05D006191 0.0e+00 1094.0 1094 57.0
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 0.0e+00 1087.4 1198 52.8
Glyma.14G081100 Glycine max HOM05D004348 ORTHO05D006191 2.9e-306 1055.8 970 58.0
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 1.2e-304 1050.4 1052 55.2
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 1.2e-296 1023.8 1105 53.0
MBI06_g27707_MAGBIO Magnolia biondii HOM05D004348 ORTHO05D006191 6.0e-296 1021.5 958 58.8
Aa31LG2G16180 Aethionema arabicum HOM05D004348 ORTHO05D006191 3.8e-290 1002.3 894 59.2
unitig_26.g10059 Utricularia gibba HOM05D004348 ORTHO05D006191 2.5e-278 963.0 884 60.4
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 1.0e-271 941.0 1041 51.7
SHI08301 Sapria himalayana HOM05D004348 ORTHO05D006191 4.7e-264 915.6 955 54.2
Mapoly0033s0109 Marchantia polymorpha HOM05D004348 ORTHO05D006191 1.2e-216 758.1 1203 40.1
AagrBONN_evm.TU.Sc2ySwM_344.1636 Anthoceros agrestis HOM05D004348 ORTHO05D006191 4.4e-206 723.0 1173 40.2
SMO144G0009 Selaginella moellendorffii HOM05D004348 ORTHO05D006191 8.4e-205 718.8 1105 41.4
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 2.7e-195 687.2 1164 42.2
Pp3c17_5660 Physcomitrium patens HOM05D004348 ORTHO05D006191 1.6e-176 624.8 1116 37.5
Os03g0185500 Oryza sativa ssp. japonica HOM05D004348 ORTHO05D006191 3.2e-172 610.5 537 59.8
SEGI_07910 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 6.7e-162 576.2 582 54.0
SEGI_03031 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 3.4e-158 563.9 738 45.5
Potri.002G128201 Populus trichocarpa HOM05D004348 ORTHO05D006191 8.5e-157 559.3 474 61.8
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 7.2e-156 556.2 694 49.9
MSTRG.22273 Avicennia marina HOM05D004348 ORTHO05D006191 1.5e-121 442.2 315 72.4
Lsat_1_v5_gn_1_21400 Lactuca sativa HOM05D004348 ORTHO05D006191 1.9e-103 382.1 332 64.2
Lsat_1_v5_gn_1_42721 Lactuca sativa HOM05D004348 ORTHO05D006191 1.9e-103 382.1 332 64.2
Lsat_1_v5_gn_9_17721 Lactuca sativa HOM05D004348 ORTHO05D006191 1.9e-103 382.1 332 64.2
CBR_g45541 Chara braunii HOM05D004348 ORTHO05D006191 1.9e-95 355.5 1340 27.2
unitig_26.g10060 Utricularia gibba HOM05D004348 ORTHO05D006191 1.2e-81 309.7 211 72.0
Lsat_1_v5_gn_3_76560 Lactuca sativa HOM05D004348 ORTHO05D006191 2.4e-74 285.4 233 67.8
Lsat_1_v5_gn_4_501 Lactuca sativa HOM05D004348 ORTHO05D006191 2.4e-74 285.4 233 67.8
CiPaw.16G046800 Carya illinoinensis HOM05D004348 ORTHO05D006191 1.5e-73 282.7 167 77.2
MD08G1105800 Malus domestica HOM05D004348 ORTHO05D006191 7.6e-73 280.4 156 80.8
HPP92_028299 Vanilla planifolia HOM05D004348 ORTHO05D006191 9.9e-73 280.0 154 82.5
Lsat_1_v5_gn_2_12981 Lactuca sativa HOM05D004348 ORTHO05D006191 2.1e-70 272.3 256 61.7
MSTRG.22274 Avicennia marina HOM05D004348 ORTHO05D006191 8.7e-69 266.9 180 72.8
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 7.4e-60 237.3 128 82.8
SHI08298 Sapria himalayana HOM05D004348 ORTHO05D006191 1.1e-55 223.4 153 71.2
HPP92_019296 Vanilla planifolia HOM05D004348 ORTHO05D006191 2.1e-46 192.6 113 79.6
Lsat_1_v5_gn_9_98160 Lactuca sativa HOM05D004348 ORTHO05D005602 2.8e-43 182.2 183 57.9
TPR.G40548 Trifolium pratense HOM05D004348 ORTHO05D006191 1.4e-42 179.9 104 76.9
SEGI_30856 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 3.3e-36 158.7 248 41.1
Haze_18739 Corylus avellana HOM05D004348 ORTHO05D006191 4.1e-34 151.8 175 47.4
Cre16.g686501 Chlamydomonas reinhardtii HOM05D004348 ORTHO05D006191 3.5e-33 148.7 281 35.2
PRCOL_00001182 Prasinoderma coloniale HOM05D004348 ORTHO05D006191 8.0e-30 137.5 311 33.1
Aa31LG2G16170 Aethionema arabicum HOM05D004348 ORTHO05D006191 5.2e-29 134.8 182 47.3
Lsat_1_v5_gn_9_67901 Lactuca sativa HOM05D004348 ORTHO05D006191 2.9e-24 119.0 98 71.4
Mapoly0017s0011 Marchantia polymorpha HOM05D004348 ORTHO05D006191 5.9e-17 94.7 143 42.7
SGA_v2.0_scaffold6G03459 Striga asiatica HOM05D004348 ORTHO05D006191 1.7e-16 93.2 46 91.3
CAN.G371.43 Capsicum annuum HOM05D004348 ORTHO05D006191 1.1e-15 90.5 98 55.1
SEGI_03645 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 1.5e-15 90.1 193 34.2
Sp7g06010 Schrenkiella parvula HOM05D004348 ORTHO05D006191 4.4e-12 78.6 73 56.2
Lsat_1_v5_gn_5_11760 Lactuca sativa HOM05D004348 ORTHO05D006191 1.2e-09 70.5 87 48.3
Mapoly0067s0037 Marchantia polymorpha HOM05D011080 ORTHO05D000239 1.6e-09 70.1 297 23.2
Mapoly0107s0021 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.6e-09 70.1 275 25.5
Atru.chr1.1667 Acer truncatum HOM05D004348 ORTHO05D006191 2.7e-09 69.3 123 42.3
GSVIVG01009550001 Vitis vinifera HOM05D004348 ORTHO05D006191 4.5e-09 68.6 41 78.0
SGA_v2.0_scaffold162G37946 Striga asiatica HOM05D004348 ORTHO05D006191 7.7e-09 67.8 31 93.5
Mapoly0007s0015 Marchantia polymorpha HOM05D000005 ORTHO05D000239 2.3e-08 66.2 311 25.4
Mapoly0200s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 3.8e-08 65.5 283 23.3
Mapoly2546s0001 Marchantia polymorpha HOM05D004348 ORTHO05D000239 1.5e-07 63.5 302 23.8
Pp3c9_17530 Physcomitrium patens HOM05D031884 ORTHO05D311885 2.8e-06 59.3 316 25.6


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