Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold226G43123 Striga asiatica HOM05D028144 ORTHO05D000022 8.5e-125 450.3 217 100.0
SGA_v2.0_scaffold32G13212 Striga asiatica HOM05D044428 ORTHO05D000022 2.1e-38 163.3 78 98.7
SGA_v2.0_scaffold471G52078 Striga asiatica HOM05D028144 ORTHO05D000022 6.5e-32 141.7 80 87.5
SGA_v2.0_scaffold109G31034 Striga asiatica HOM05D028144 ORTHO05D000022 2.1e-27 126.7 76 78.9
SGA_v2.0_scaffold150G36647 Striga asiatica HOM05D028144 ORTHO05D000022 4.1e-18 95.9 80 65.0
MBI18_g33703_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.0e-16 89.0 203 30.5
SGA_v2.0_scaffold152G36891 Striga asiatica HOM05D044428 ORTHO05D000022 1.6e-14 84.0 38 97.4
MBI01_g02158_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.1e-13 79.0 245 27.3
MBI17_g21963_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.7e-12 74.7 254 26.0
MBI18_g24880_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.7e-11 72.8 220 26.8
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 6.3e-11 72.0 259 23.6
MBI14_g11704_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.4e-10 70.1 131 32.8
MBI18_g15860_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D000022 2.4e-10 70.1 223 26.5
MBI15_g20075_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.3e-10 68.9 123 34.1
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 1.2e-09 67.8 259 23.9
MBI07_g18987_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.6e-09 66.6 107 34.6
MBI01_g01362_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.4e-09 66.2 123 34.1
MBI18_g20209_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-09 66.2 107 35.5
MBI17_g31745_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.5e-09 65.9 225 24.4
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 4.5e-09 65.9 262 23.7
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 4.5e-09 65.9 262 23.7
MBI06_g11890_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-09 65.5 222 26.1
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.0e-08 64.7 122 29.5
TAR014G0002 Trochodendron aralioides HOM05D000155 ORTHO05D000022 1.0e-08 64.7 244 25.4
MBI04_g34097_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.7e-08 63.9 123 32.5
MSTRG.28030 Avicennia marina HOM05D000155 ORTHO05D000022 2.9e-08 63.2 169 26.6
MBI09_g18083_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.9e-08 63.2 198 27.3
MBI18_g36110_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.9e-08 63.2 199 28.6
MBI18_g39291_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.0e-08 62.4 135 29.6
Thecc.04G000200 Theobroma cacao HOM05D000155 ORTHO05D000022 5.0e-08 62.4 122 29.5
MBI07_g35233_MAGBIO Magnolia biondii HOM05D000097 ORTHO05D000041 6.5e-08 62.0 107 31.8
MBI13_g15303_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.1e-07 61.2 107 35.5
Sabra11G0000200 Salix brachista HOM05D000155 ORTHO05D000022 1.4e-07 60.8 266 19.9
Aqoxy3G02146 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-07 60.5 129 31.0
MBI06_g08197_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-07 60.5 187 28.3
MBI14_g05420_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-07 60.5 156 30.1
MBI19_g47804_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-07 60.5 109 35.8
MBI04_g26256_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-07 60.1 117 30.8
MBI18_g20082_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-07 60.1 119 31.9
MBI11_g05091_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.2e-07 59.7 109 34.9
MBI18_g24212_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 3.2e-07 59.7 136 31.6
MBI19_g23207_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.2e-07 59.3 114 32.5
TAR400G0001 Trochodendron aralioides HOM05D000155 ORTHO05D000022 4.2e-07 59.3 178 28.1
Atru.chr3.666 Acer truncatum HOM05D000155 ORTHO05D000022 5.5e-07 58.9 256 26.6
MBI19_g04943_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.5e-07 58.9 108 31.5
Thecc.10G084500 Theobroma cacao HOM05D000003 ORTHO05D011148 5.5e-07 58.9 87 39.1
Lj4P171T33 Lonicera japonica HOM05D000155 ORTHO05D000022 7.2e-07 58.5 169 25.4
MBI15_g27817_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.2e-07 58.5 114 36.0
MBI15_g34614_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.2e-07 58.5 214 25.7
MBI16_g07270_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.2e-07 58.5 112 33.0
MBI16_g37125_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.2e-07 58.5 114 29.8
MBI18_g13990_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.2e-07 58.5 123 29.3
Thecc.02G366600 Theobroma cacao HOM05D000003 ORTHO05D000006 7.2e-07 58.5 122 27.0
MBI05_g34248_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.4e-07 58.2 114 33.3
MBI15_g04619_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.8 112 33.9
MBI17_g20221_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.8 240 23.8
MBI18_g34828_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.8 112 34.8
SHI10451 Sapria himalayana HOM05D000155 ORTHO05D000022 1.2e-06 57.8 162 27.2
MBI04_g00337_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 57.4 125 28.8
MBI16_g20728_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 57.4 112 34.8
MBI18_g22708_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 57.4 119 32.8
MBI08_g09885_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.1e-06 57.0 219 25.1
MBI14_g12128_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-06 57.0 124 29.8
MBI01_g02759_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 110 30.0
MBI08_g18844_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 126 31.7
MBI11_g10523_MAGBIO Magnolia biondii HOM05D001725 ORTHO05D001757 2.7e-06 56.6 158 28.5
MBI16_g46372_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 107 34.6
SEGI_19006 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 2.7e-06 56.6 115 34.8
Aqoxy7G00533 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 3.6e-06 56.2 104 33.7
Aqoxy7G02241 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.6e-06 56.2 129 30.2
MBI02_g38177_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-06 56.2 100 33.0
MBI18_g21787_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-06 56.2 125 31.2
MBI16_g11012_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.7e-06 55.8 183 26.2
MBI18_g46632_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.7e-06 55.8 112 32.1
MBI19_g11757_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.7e-06 55.8 111 29.7
MBI01_g02773_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.1e-06 55.5 247 24.3
MBI07_g24347_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.1e-06 55.5 122 27.9
MBI12_g32350_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.1e-06 55.5 123 28.5
MBI14_g11596_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.1e-06 55.5 239 23.0
MBI18_g06638_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.1e-06 55.5 176 28.4
Nitab4.5_0000062g0590 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.1e-06 55.5 107 32.7
MBI18_g16547_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.9e-06 55.1 108 35.2
MBI19_g13510_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.9e-06 55.1 107 32.7


User provided reference genes

Program Settings