Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 1.5e-63 246.5 179 100.0
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 1.8e-48 196.4 135 85.2
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 5.9e-47 191.4 126 82.5
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.3e-46 190.3 143 76.9
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.3e-46 190.3 126 81.7
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.7e-46 189.9 140 74.3
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 1.7e-46 189.9 135 78.5
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 3.8e-46 188.7 137 79.6
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.9e-45 186.4 133 78.2
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 2.5e-45 186.0 126 78.6
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 2.7e-44 182.6 134 73.9
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 7.9e-44 181.0 125 77.6
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 7.9e-44 181.0 125 77.6
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 5.1e-43 178.3 125 76.8
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 2.0e-42 176.4 131 74.0
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 2.2e-41 172.9 132 72.7
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.8e-41 172.6 127 74.0
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 2.8e-41 172.6 126 75.4
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 4.8e-41 171.8 135 71.9
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 8.2e-41 171.0 127 73.2
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 1.8e-40 169.9 125 80.8
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 3.4e-39 165.6 124 75.0
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 3.4e-39 165.6 138 69.6
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 7.7e-39 164.5 123 73.2
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 2.9e-38 162.5 124 75.0
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 5.0e-38 161.8 123 72.4
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.4e-37 160.2 121 72.7
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 4.2e-37 158.7 118 77.1
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 5.5e-37 158.3 126 70.6
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 5.5e-37 158.3 109 79.8
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 5.5e-37 158.3 116 74.1
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 5.5e-37 158.3 122 71.3
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 5.5e-37 158.3 121 74.4
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 7.2e-37 157.9 120 71.7
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 7.2e-37 157.9 123 72.4
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 9.4e-37 157.5 127 70.1
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 1.2e-36 157.1 117 72.6
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 1.6e-36 156.8 139 65.5
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.6e-36 156.8 120 75.0
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 2.1e-36 156.4 121 71.9
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.7e-36 156.0 128 68.0
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.6e-36 155.6 121 72.7
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.6e-36 155.6 121 72.7
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 4.7e-36 155.2 120 74.2
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 7.9e-36 154.5 119 74.8
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 1.4e-35 153.7 118 73.7
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.8e-35 153.3 120 70.8
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 1.8e-35 153.3 116 77.6
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 3.0e-35 152.5 118 72.9
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 5.1e-35 151.8 124 70.2
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 5.1e-35 151.8 134 64.2
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 5.1e-35 151.8 116 76.7
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 6.7e-35 151.4 118 73.7
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 6.7e-35 151.4 118 73.7
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 8.8e-35 151.0 122 70.5
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 8.8e-35 151.0 183 51.4
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 8.8e-35 151.0 133 68.4
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 1.1e-34 150.6 116 70.7
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 1.5e-34 150.2 124 69.4
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 2.6e-34 149.4 124 67.7
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 3.3e-34 149.1 121 69.4
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 4.4e-34 148.7 111 73.9
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 5.7e-34 148.3 114 72.8
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 7.4e-34 147.9 123 67.5
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.3e-33 147.1 118 70.3
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.7e-33 146.7 131 66.4
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.7e-33 146.7 94 76.6
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 4.8e-33 145.2 104 75.0
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 1.1e-32 144.1 138 68.8
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 1.1e-32 144.1 116 75.9
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.1e-32 144.1 116 75.9
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.1e-32 144.1 116 75.9
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 2.4e-32 142.9 123 63.4
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 3.1e-32 142.5 123 63.4
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 3.1e-32 142.5 116 69.0
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.1e-32 142.5 116 75.0
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 5.3e-32 141.7 111 72.1
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 7.0e-32 141.4 122 63.1
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 7.0e-32 141.4 142 61.3
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 1.5e-31 140.2 156 56.4
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 5.9e-31 138.3 85 83.5
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 7.7e-31 137.9 159 53.5
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.3e-30 137.1 119 63.0
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.3e-30 137.1 121 63.6
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.7e-30 136.7 176 50.6
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 2.9e-30 136.0 119 62.2
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 2.9e-30 136.0 119 62.2
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 2.9e-30 136.0 119 62.2
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 2.9e-30 136.0 97 74.2
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.9e-30 136.0 82 85.4
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 3.8e-30 135.6 119 61.3
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 6.5e-30 134.8 119 63.9
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 6.5e-30 134.8 147 54.4
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 8.5e-30 134.4 93 73.1
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 1.1e-29 134.0 122 60.7
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.1e-29 134.0 117 67.5
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 1.1e-29 134.0 112 67.0
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 4.2e-29 132.1 91 74.7
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 4.2e-29 132.1 91 74.7
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 9.4e-29 131.0 116 62.1
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 9.4e-29 131.0 114 62.3
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.2e-28 130.6 105 65.7
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 2.1e-28 129.8 80 82.5
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 2.7e-28 129.4 114 61.4
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 4.7e-28 128.6 115 60.9
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 1.4e-27 127.1 76 85.5
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.0e-27 125.9 135 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 3.9e-27 125.6 121 59.5
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 3.9e-27 125.6 86 77.9
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 2.6e-26 122.9 75 82.7
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 4.4e-26 122.1 112 61.6
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 1.3e-25 120.6 122 61.5
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 4.8e-25 118.6 130 56.2
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.2e-23 114.0 91 72.5
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 1.6e-23 113.6 86 70.9
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 2.0e-23 113.2 106 67.0
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 6.5e-22 108.2 88 69.3
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 1.5e-21 107.1 139 50.4
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 7.2e-21 104.8 93 62.4
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 1.2e-20 104.0 97 62.9
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 8.8e-19 97.8 88 63.6
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.8e-16 90.1 89 56.2
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 5.4e-16 88.6 243 32.9
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 7.7e-15 84.7 82 57.3
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 3.2e-13 79.3 137 44.5
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 5.5e-13 78.6 76 59.2
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 4.7e-12 75.5 46 87.0
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.2e-10 70.9 42 83.3
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 3.4e-10 69.3 99 50.5
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 3.5e-07 59.3 48 60.4
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 3.5e-07 59.3 67 46.3
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 2.3e-06 56.6 42 66.7


User provided reference genes

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