Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold225G43046 Striga asiatica HOM05D011217 ORTHO05D013910 5.2e-187 657.5 321 100.0
SGA_v2.0_scaffold260G45875 Striga asiatica HOM05D011217 ORTHO05D013910 5.8e-29 132.5 284 30.6
SGA_v2.0_scaffold223G42834 Striga asiatica HOM05D011217 ORTHO05D013910 1.1e-27 128.3 360 30.0
SGA_v2.0_scaffold659G53391 Striga asiatica HOM05D011217 ORTHO05D013910 1.7e-25 120.9 305 30.5
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 4.3e-24 116.3 159 39.6
SGA_v2.0_scaffold37G14639 Striga asiatica HOM05D011217 ORTHO05D013910 2.1e-23 114.0 159 39.0
SGA_v2.0_scaffold3G01524 Striga asiatica HOM05D011217 ORTHO05D013910 9.0e-22 108.6 141 39.0
SGA_v2.0_scaffold21G09417 Striga asiatica HOM05D011217 ORTHO05D013910 2.0e-21 107.5 282 28.4
SGA_v2.0_scaffold74G24728 Striga asiatica HOM05D011217 ORTHO05D013910 6.4e-20 102.4 287 27.9
SGA_v2.0_scaffold44G16775 Striga asiatica HOM05D011217 ORTHO05D013910 2.4e-19 100.5 236 33.5
SGA_v2.0_scaffold74G24724 Striga asiatica HOM05D011217 ORTHO05D013910 1.5e-16 91.3 258 30.2
SGA_v2.0_scaffold109G31168 Striga asiatica HOM05D011217 ORTHO05D013910 6.9e-14 82.4 182 28.0
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 1.9e-11 74.3 188 29.8
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 2.4e-11 73.9 309 20.4
Peaxi162Scf00000g43014 Petunia axillaris HOM05D000665 ORTHO05D000140 4.2e-11 73.2 171 25.1
Lj7A726T26 Lonicera japonica HOM05D008338 ORTHO05D000921 1.2e-10 71.6 162 28.4
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 1.2e-10 71.6 179 26.8
PGSC0003DMG400012885 Solanum tuberosum HOM05D000665 ORTHO05D000140 1.2e-10 71.6 171 24.6
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 3.5e-10 70.1 199 27.1
PGSC0003DMG400036457 Solanum tuberosum HOM05D000665 ORTHO05D000140 1.3e-09 68.2 176 24.4
CiPaw.15G091800 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.3e-09 67.4 161 28.0
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 3.0e-09 67.0 149 24.8
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 3.0e-09 67.0 149 24.8
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 3.0e-09 67.0 178 28.1
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 3.0e-09 67.0 178 28.1
Cpa.g.sc6.284 Carica papaya HOM05D000665 ORTHO05D003147 5.1e-09 66.2 165 24.2
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.7e-09 65.9 194 25.3
PSO541G4041 Papaver somniferum HOM05D000665 ORTHO05D000140 6.7e-09 65.9 166 22.3
Prupe.7G171400 Prunus persica HOM05D000665 ORTHO05D003147 8.7e-09 65.5 214 22.4
FvH4_1g11471 Fragaria vesca HOM05D000665 ORTHO05D003147 1.1e-08 65.1 235 22.6
GSVIVG01018738001 Vitis vinifera HOM05D000665 ORTHO05D003147 1.1e-08 65.1 322 20.2
Nn8g39982 Nelumbo nucifera HOM05D013718 ORTHO05D000285 1.5e-08 64.7 197 23.9
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.5e-08 64.7 140 30.0
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 1.9e-08 64.3 312 19.6
MD14G1042600 Malus domestica HOM05D000665 ORTHO05D000140 2.5e-08 63.9 174 25.9
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 3.3e-08 63.5 153 22.9
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 5.6e-08 62.8 153 24.2
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 7.4e-08 62.4 162 24.7
TPR.G32241 Trifolium pratense HOM05D000984 ORTHO05D000921 7.4e-08 62.4 297 20.2
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 9.6e-08 62.0 153 24.2
Rhsim01G0288300 Rhododendron simsii HOM05D000665 ORTHO05D000140 9.6e-08 62.0 167 23.4
vmacro15129 Vaccinium macrocarpon HOM05D000665 ORTHO05D000140 1.3e-07 61.6 167 24.0
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 1.6e-07 61.2 162 24.1
QL07p026924 Quercus lobata HOM05D000665 ORTHO05D000140 1.6e-07 61.2 196 25.0
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 2.1e-07 60.8 167 26.3
Dinv25068 Davidia involucrata HOM05D000665 ORTHO05D000140 2.1e-07 60.8 162 22.8
PSO170G2007 Papaver somniferum HOM05D000665 ORTHO05D003147 2.8e-07 60.5 205 24.9
PSO170G6184 Papaver somniferum HOM05D000665 ORTHO05D000140 2.8e-07 60.5 160 22.5
PSO541G6499 Papaver somniferum HOM05D000665 ORTHO05D003147 2.8e-07 60.5 209 24.9
PSO716G0001 Papaver somniferum HOM05D000665 ORTHO05D003147 2.8e-07 60.5 205 24.9
PGR102G1972 Punica granatum HOM05D003171 ORTHO05D000921 2.8e-07 60.5 162 21.0
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 2.8e-07 60.5 223 24.7
Sabra02G0158000 Salix brachista HOM05D000665 ORTHO05D000140 4.8e-07 59.7 156 21.8
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 4.8e-07 59.7 161 24.8
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.2e-07 59.3 161 26.7
Ciclev10010556m.g Citrus clementina HOM05D000665 ORTHO05D000140 6.2e-07 59.3 173 20.8
Duzib187G0414 Durio zibethinus HOM05D000665 ORTHO05D000140 6.2e-07 59.3 209 23.9
PSO170G5921 Papaver somniferum HOM05D000665 ORTHO05D003147 6.2e-07 59.3 209 25.4
Phvul.002G106800 Phaseolus vulgaris HOM05D000665 ORTHO05D003147 6.2e-07 59.3 109 29.4
THA.LOC104820967 Tarenaya hassleriana HOM05D000665 ORTHO05D000140 6.2e-07 59.3 149 22.1
Thecc.09G014200 Theobroma cacao HOM05D000665 ORTHO05D000140 6.2e-07 59.3 160 22.5
Migut.A00363 Erythranthe guttata HOM05D000665 ORTHO05D000140 8.1e-07 58.9 316 20.9
Glyma.11G078600 Glycine max HOM05D000665 ORTHO05D003147 8.1e-07 58.9 78 32.1
PGR142G3616 Punica granatum HOM05D003171 ORTHO05D000921 8.1e-07 58.9 164 23.2
GSVIVG01035986001 Vitis vinifera HOM05D000665 ORTHO05D000140 8.1e-07 58.9 174 22.4
AT1G30140 Arabidopsis thaliana HOM05D001678 ORTHO05D001698 1.1e-06 58.5 171 26.9
arahy.Tifrunner.gnm1.ann1.BDR352 Arachis hypogaea HOM05D000665 ORTHO05D003147 1.1e-06 58.5 92 29.3
arahy.Tifrunner.gnm1.ann1.Q4VSGN Arachis hypogaea HOM05D000665 ORTHO05D003147 1.1e-06 58.5 92 29.3
Haze_04223 Corylus avellana HOM05D000665 ORTHO05D000140 1.1e-06 58.5 174 22.4
Haze_20106 Corylus avellana HOM05D000665 ORTHO05D000140 1.1e-06 58.5 177 24.9
Eucgr.C04039 Eucalyptus grandis HOM05D000665 ORTHO05D000140 1.1e-06 58.5 193 21.2
PSO170G0901 Papaver somniferum HOM05D000665 ORTHO05D003147 1.1e-06 58.5 115 34.8
VMungo1309G2699 Vigna mungo HOM05D000665 ORTHO05D000140 1.1e-06 58.5 164 22.0
Glyma.01G164400 Glycine max HOM05D000665 ORTHO05D003147 1.4e-06 58.2 109 28.4
PSO384G2875 Papaver somniferum HOM05D000665 ORTHO05D003147 1.4e-06 58.2 111 35.1
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 1.4e-06 58.2 194 24.7
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.4e-06 58.2 244 23.4
Carub.0006s0470 Capsella rubella HOM05D000876 ORTHO05D000285 1.8e-06 57.8 202 22.3
Cpa.g.sc148.33 Carica papaya HOM05D000665 ORTHO05D000140 1.8e-06 57.8 170 21.2
Dinv11881 Davidia involucrata HOM05D000665 ORTHO05D000140 1.8e-06 57.8 227 22.5
Lj7C736T17 Lonicera japonica HOM05D000665 ORTHO05D000140 1.8e-06 57.8 180 23.3
SGA_v2.0_scaffold270G46304 Striga asiatica HOM05D011217 ORTHO05D013910 1.8e-06 57.8 67 43.3
CANSAT64G0977 Cannabis sativa HOM05D000665 ORTHO05D000140 2.4e-06 57.4 178 21.9
COL.COLO4_22459 Corchorus olitorius HOM05D000665 ORTHO05D003147 2.4e-06 57.4 91 28.6
Nn2g14028 Nelumbo nucifera HOM05D000665 ORTHO05D000140 2.4e-06 57.4 163 21.5
PSO782G1930 Papaver somniferum HOM05D000665 ORTHO05D000140 2.4e-06 57.4 165 21.8
ATR0582G270 Amborella trichopoda HOM05D000665 ORTHO05D000140 3.1e-06 57.0 174 20.1
Thhalv10000052m.g Eutrema salsugineum HOM05D000665 ORTHO05D000140 3.1e-06 57.0 153 19.6
TWI34G1677 Tripterygium wilfordii HOM05D000665 ORTHO05D000140 3.1e-06 57.0 146 20.5
Haze_04987 Corylus avellana HOM05D000665 ORTHO05D000140 4.0e-06 56.6 157 21.0
Dinv07014 Davidia involucrata HOM05D000665 ORTHO05D000921 4.0e-06 56.6 163 23.3
PSO541G6026 Papaver somniferum HOM05D000665 ORTHO05D000140 4.0e-06 56.6 152 25.7
Potri.006G265900 Populus trichocarpa HOM05D000665 ORTHO05D000140 4.0e-06 56.6 174 21.3
Prupe.1G395600 Prunus persica HOM05D000665 ORTHO05D000140 4.0e-06 56.6 159 23.3
Rhsim02G0216200 Rhododendron simsii HOM05D000665 ORTHO05D000140 4.0e-06 56.6 146 21.2
COL.COLO4_18963 Corchorus olitorius HOM05D000665 ORTHO05D000140 5.3e-06 56.2 160 20.6
Lsat_1_v5_gn_6_77601 Lactuca sativa HOM05D000665 ORTHO05D000140 5.3e-06 56.2 160 21.2
MD15G1042400 Malus domestica HOM05D000665 ORTHO05D000140 5.3e-06 56.2 160 21.2
Psat5g151680 Pisum sativum HOM05D000665 ORTHO05D000921 5.3e-06 56.2 166 24.7
C02p32520 Brassica napus HOM05D001678 ORTHO05D001698 6.9e-06 55.8 131 28.2
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 6.9e-06 55.8 191 24.1
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 6.9e-06 55.8 161 24.8
Gorai.009G063800 Gossypium raimondii HOM05D000653 ORTHO05D002177 6.9e-06 55.8 160 21.9
Psat7g015480 Pisum sativum HOM05D000665 ORTHO05D000921 6.9e-06 55.8 164 23.2
QL03p004675 Quercus lobata HOM05D000665 ORTHO05D000140 6.9e-06 55.8 165 23.6
RcHm_v2.0_Chr2g0099061 Rosa chinensis HOM05D000665 ORTHO05D003147 6.9e-06 55.8 227 22.0
Thecc.01G014900 Theobroma cacao HOM05D000665 ORTHO05D003147 6.9e-06 55.8 88 28.4
TWI09G0766 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 6.9e-06 55.8 163 23.3
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 9.0e-06 55.5 164 25.6
BcaC07g37804 Brassica carinata HOM05D001678 ORTHO05D001698 9.0e-06 55.5 131 28.2
BolC8t48193H Brassica oleracea HOM05D001678 ORTHO05D001698 9.0e-06 55.5 131 28.2
Thhalv10029365m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 9.0e-06 55.5 67 35.8
Medtr5g022570 Medicago truncatula HOM05D000665 ORTHO05D003147 9.0e-06 55.5 204 21.6
PSO541G5373 Papaver somniferum HOM05D000665 ORTHO05D003147 9.0e-06 55.5 174 24.7


User provided reference genes

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