Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 8.5e-235 816.6 410 100.0
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 7.6e-58 228.8 301 49.5
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 5.1e-54 216.1 326 48.5
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 4.2e-48 196.4 309 44.7
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 7.4e-45 185.7 302 44.0
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 1.6e-44 184.5 315 43.5
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 2.4e-43 180.6 303 45.5
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 3.1e-43 180.3 318 42.1
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 4.0e-43 179.9 327 40.7
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 6.9e-43 179.1 323 41.8
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 9.0e-43 178.7 325 40.6
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 3.4e-42 176.8 314 41.4
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 1.0e-41 175.3 323 43.7
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.3e-41 174.9 318 40.6
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 2.2e-41 174.1 317 41.6
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.1e-40 171.8 323 39.6
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 1.9e-40 171.0 325 39.1
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.5e-40 170.6 324 41.7
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 2.5e-40 170.6 324 41.7
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.2e-40 170.2 316 43.0
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.2e-40 170.2 348 40.5
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 4.2e-40 169.9 337 39.5
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 9.3e-40 168.7 314 40.8
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 9.3e-40 168.7 309 38.2
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.6e-39 167.9 322 38.5
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 3.5e-39 166.8 326 37.7
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 3.5e-39 166.8 316 40.2
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 6.0e-39 166.0 319 41.4
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 1.0e-38 165.2 326 40.8
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 3.0e-38 163.7 316 40.2
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 3.0e-38 163.7 316 39.6
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 6.7e-38 162.5 311 38.6
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 8.7e-38 162.2 310 39.4
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 1.9e-37 161.0 315 39.0
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.3e-37 160.2 315 41.0
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 4.3e-37 159.8 320 40.6
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 3.7e-36 156.8 302 39.7
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 8.2e-36 155.6 309 41.1
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.1e-35 155.2 298 39.9
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 1.8e-35 154.5 315 41.3
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.2e-34 151.8 321 37.1
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 2.0e-34 151.0 318 39.3
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 2.6e-34 150.6 314 39.2
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 2.6e-34 150.6 286 39.2
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 4.5e-34 149.8 339 37.2
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 1.0e-33 148.7 312 39.4
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.3e-33 148.3 311 40.2
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 5.0e-33 146.4 308 37.7
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 5.0e-33 146.4 289 39.4
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 6.5e-33 146.0 317 37.2
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 2.5e-32 144.1 312 39.7
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 3.9e-30 136.7 330 38.5
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 6.7e-30 136.0 307 38.4
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.1e-29 135.2 327 37.9
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 4.3e-29 133.3 325 38.2
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 2.8e-28 130.6 293 37.2
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 3.1e-27 127.1 299 36.5
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 9.0e-27 125.6 365 32.3
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 1.5e-26 124.8 300 36.7
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 7.7e-26 122.5 302 36.1
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.0e-25 122.1 345 33.3
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 1.7e-25 121.3 294 35.7
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.7e-25 121.3 367 33.0
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.9e-25 120.6 313 34.2
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 1.1e-24 118.6 268 38.8
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 7.2e-24 115.9 289 32.9
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 9.4e-24 115.5 311 35.4
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 2.1e-23 114.4 285 35.4
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 6.1e-23 112.8 286 35.0
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 1.0e-22 112.1 309 35.6
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 3.0e-22 110.5 398 31.7
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 3.9e-22 110.2 175 46.3
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 8.8e-22 109.0 312 35.9
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.5e-21 108.2 301 34.2
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 2.5e-21 107.5 253 34.0
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 3.3e-21 107.1 286 35.0
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 9.7e-21 105.5 282 33.0
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 9.7e-21 105.5 310 33.5
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 1.7e-20 104.8 265 34.7
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 2.8e-20 104.0 261 34.9
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.8e-20 104.0 213 41.3
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 4.8e-20 103.2 308 32.8
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 1.4e-19 101.7 308 35.4
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.4e-19 101.7 284 34.9
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 5.3e-19 99.8 308 33.8
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 9.1e-19 99.0 297 32.3
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 2.6e-18 97.4 271 35.8
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 4.5e-18 96.7 301 34.2
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 1.3e-17 95.1 318 31.1
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 2.2e-17 94.4 180 38.9
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 3.2e-16 90.5 324 34.3
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 4.2e-16 90.1 291 30.2
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 5.5e-16 89.7 264 34.5
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 2.1e-15 87.8 309 30.4
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 4.7e-15 86.7 279 33.0
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.0e-14 85.5 317 32.2
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 1.8e-14 84.7 304 33.6
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 3.9e-14 83.6 255 35.7
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 5.1e-14 83.2 199 35.7
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 2.0e-13 81.3 288 34.0
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 3.3e-13 80.5 250 34.8
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 4.4e-13 80.1 330 30.9
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 5.7e-13 79.7 282 32.6
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 2.2e-12 77.8 231 35.5
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 4.8e-12 76.6 310 31.3
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 4.8e-12 76.6 314 31.5
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 4.8e-12 76.6 301 31.6
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 8.2e-12 75.9 219 33.8
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.8e-11 74.7 179 36.3
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 2.6e-10 70.9 260 28.5
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 2.9e-09 67.4 221 34.8
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 5.0e-09 66.6 148 39.9
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 8.5e-09 65.9 288 32.3
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 1.9e-08 64.7 289 32.9
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 4.2e-08 63.5 193 34.7
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 1.6e-07 61.6 238 31.1
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 2.1e-07 61.2 105 42.9
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 4.0e-06 57.0 245 30.6


User provided reference genes

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