Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold224G42966 Striga asiatica HOM05D000214 ORTHO05D000131 1.4e-102 376.3 200 100.0
SGA_v2.0_scaffold14G07050 Striga asiatica HOM05D000214 ORTHO05D000131 2.1e-45 186.4 215 54.0
Lj1g0010084 Lotus japonicus HOM05D000214 ORTHO05D000131 7.1e-09 65.1 111 35.1
Lj2g0010710 Lotus japonicus HOM05D000214 ORTHO05D000131 7.1e-09 65.1 111 35.1
Atru.chr7.844 Acer truncatum HOM05D000214 ORTHO05D000131 2.1e-08 63.5 115 40.0
Lj1g0003300 Lotus japonicus HOM05D000214 ORTHO05D000131 3.5e-08 62.8 50 58.0
Lj1g0005097 Lotus japonicus HOM05D000214 ORTHO05D000131 3.5e-08 62.8 50 58.0
Lj1g0024846 Lotus japonicus HOM05D000214 ORTHO05D000131 3.5e-08 62.8 50 58.0
Lj5g0015099 Lotus japonicus HOM05D000214 ORTHO05D000131 3.5e-08 62.8 50 58.0
Hund18438 Selenicereus undatus HOM05D000214 ORTHO05D000131 3.5e-08 62.8 103 39.8
Lj3g0001624 Lotus japonicus HOM05D000214 ORTHO05D000131 7.8e-08 61.6 92 40.2
LjContig00141g0024663 Lotus japonicus HOM05D000214 ORTHO05D000131 1.3e-07 60.8 194 33.0
Lj4g0023000 Lotus japonicus HOM05D000214 ORTHO05D000131 1.7e-07 60.5 50 58.0
BcaB03g16869 Brassica carinata HOM05D000214 ORTHO05D000131 2.3e-07 60.1 49 61.2
BolC1t01036H Brassica oleracea HOM05D000214 ORTHO05D000131 5.1e-07 58.9 49 59.2
Lj1g0025486 Lotus japonicus HOM05D000214 ORTHO05D000131 8.7e-07 58.2 88 38.6
BcaB08g35561 Brassica carinata HOM05D000214 ORTHO05D000131 1.1e-06 57.8 52 55.8
Os01g0872900 Oryza sativa ssp. japonica HOM05D000214 ORTHO05D000131 1.1e-06 57.8 50 54.0
BolC9t59154H Brassica oleracea HOM05D000214 ORTHO05D000131 1.5e-06 57.4 49 55.1
Hund17012 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.9e-06 57.0 107 35.5
BcaC03g15668 Brassica carinata HOM05D000214 ORTHO05D000131 3.3e-06 56.2 49 55.1
Os06g0597250 Oryza sativa ssp. japonica HOM05D000214 ORTHO05D000131 3.3e-06 56.2 36 72.2
BcaC05g28208 Brassica carinata HOM05D000214 ORTHO05D000131 4.3e-06 55.8 49 55.1
BolC4t25878H Brassica oleracea HOM05D000214 ORTHO05D000131 4.3e-06 55.8 49 57.1
ECA232G3907 Erigeron canadensis HOM05D000214 ORTHO05D000131 4.3e-06 55.8 68 44.1
Lj1g0017353 Lotus japonicus HOM05D000214 ORTHO05D000131 5.6e-06 55.5 47 55.3
Hund00684 Selenicereus undatus HOM05D000214 ORTHO05D000131 5.6e-06 55.5 97 41.2
Hund04667 Selenicereus undatus HOM05D000214 ORTHO05D000131 5.6e-06 55.5 160 31.2
BcaNung03654 Brassica carinata HOM05D000214 ORTHO05D000131 7.3e-06 55.1 49 55.1
BolC3t18867H Brassica oleracea HOM05D000214 ORTHO05D000131 7.3e-06 55.1 124 36.3
BolC6t37577H Brassica oleracea HOM05D000214 ORTHO05D000131 7.3e-06 55.1 52 51.9
Cc09_g09240 Coffea canephora HOM05D000214 ORTHO05D000131 7.3e-06 55.1 63 52.4
Hund07344 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.3e-06 55.1 169 27.8
Hund09646 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.3e-06 55.1 47 55.3
TPR.G8742 Trifolium pratense HOM05D000214 ORTHO05D000131 7.3e-06 55.1 59 47.5
EL10Ac7g17263 Beta vulgaris HOM05D000214 ORTHO05D000131 9.6e-06 54.7 49 53.1
Lj2g0017664 Lotus japonicus HOM05D000214 ORTHO05D000131 9.6e-06 54.7 48 47.9
Hund26228 Selenicereus undatus HOM05D000214 ORTHO05D000131 9.6e-06 54.7 47 55.3


User provided reference genes

Program Settings