Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 1.3e-105 386.3 187 100.0
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 2.0e-53 213.0 180 63.3
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 1.3e-49 200.3 189 57.1
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 1.8e-46 189.9 183 57.9
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 3.1e-43 179.1 192 54.7
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 1.2e-42 177.2 146 63.0
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.6e-42 176.8 144 63.2
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 2.7e-42 176.0 192 55.7
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 3.5e-42 175.6 173 56.6
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 7.7e-42 174.5 152 64.5
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.0e-41 174.1 184 54.9
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 1.3e-41 173.7 196 50.5
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.8e-41 172.2 190 52.6
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 5.0e-41 171.8 162 57.4
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 6.6e-41 171.4 185 52.4
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 6.6e-41 171.4 167 56.3
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 1.1e-40 170.6 162 59.9
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 1.1e-40 170.6 154 59.7
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.5e-40 170.2 160 56.9
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 1.9e-40 169.9 91 84.6
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 3.3e-40 169.1 160 56.9
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 9.5e-40 167.5 109 73.4
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 9.5e-40 167.5 159 56.0
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 9.5e-40 167.5 154 58.4
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.2e-39 167.2 147 58.5
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 1.2e-39 167.2 126 68.3
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 1.6e-39 166.8 126 68.3
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 2.1e-39 166.4 124 67.7
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 2.8e-39 166.0 163 55.2
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 2.8e-39 166.0 163 55.2
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 3.6e-39 165.6 102 77.5
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.6e-39 165.6 156 59.6
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 4.7e-39 165.2 183 54.1
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 8.0e-39 164.5 133 63.2
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 8.0e-39 164.5 119 70.6
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.8e-38 163.3 99 74.7
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 5.2e-38 161.8 151 57.6
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 5.2e-38 161.8 115 70.4
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 6.8e-38 161.4 149 59.7
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 8.9e-38 161.0 131 64.9
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 8.9e-38 161.0 147 58.5
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 8.9e-38 161.0 147 58.5
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.2e-37 160.6 91 82.4
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 1.5e-37 160.2 160 56.9
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 1.5e-37 160.2 155 58.1
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 2.0e-37 159.8 150 56.7
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.6e-37 159.5 99 74.7
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 3.4e-37 159.1 159 53.5
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 3.4e-37 159.1 155 56.8
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 4.4e-37 158.7 156 56.4
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 4.4e-37 158.7 115 67.8
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 5.7e-37 158.3 106 70.8
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 7.5e-37 157.9 157 58.0
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 7.5e-37 157.9 95 77.9
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 1.3e-36 157.1 90 82.2
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 2.2e-36 156.4 97 73.2
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 2.9e-36 156.0 154 56.5
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 3.7e-36 155.6 89 80.9
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 3.7e-36 155.6 154 57.1
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.9e-36 155.2 169 50.3
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 6.4e-36 154.8 102 71.6
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 2.4e-35 152.9 108 67.6
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 3.2e-35 152.5 116 67.2
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 3.2e-35 152.5 89 77.5
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 9.2e-35 151.0 91 78.0
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 1.2e-34 150.6 172 50.6
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 2.0e-34 149.8 160 49.4
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 2.7e-34 149.4 165 50.3
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 3.5e-34 149.1 108 66.7
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 3.5e-34 149.1 149 55.7
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 5.9e-34 148.3 151 53.0
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 5.9e-34 148.3 147 53.7
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 7.8e-34 147.9 136 55.9
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 7.8e-34 147.9 120 61.7
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 1.0e-33 147.5 148 54.1
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 1.3e-33 147.1 119 60.5
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 3.0e-33 146.0 91 74.7
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 3.0e-33 146.0 165 54.5
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 8.6e-33 144.4 89 75.3
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 3.3e-32 142.5 111 64.0
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 5.6e-32 141.7 137 55.5
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 7.3e-32 141.4 168 48.2
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 2.8e-31 139.4 149 49.7
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 3.6e-31 139.0 113 61.1
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 3.6e-31 139.0 93 72.0
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 6.2e-31 138.3 91 71.4
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.0e-30 137.5 101 65.3
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 6.8e-30 134.8 91 68.1
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 6.8e-30 134.8 89 66.3
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.5e-29 133.7 89 66.3
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 5.8e-29 131.7 100 64.0
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 7.5e-29 131.3 90 70.0
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 1.3e-28 130.6 89 64.0
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 2.9e-28 129.4 91 65.9
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 3.7e-28 129.0 137 50.4
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 6.4e-28 128.3 89 64.0
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 5.4e-27 125.2 82 72.0
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 5.4e-27 125.2 82 72.0
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 1.6e-26 123.6 129 52.7
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 4.6e-26 122.1 96 61.5
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 1.0e-25 120.9 91 63.7
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 1.9e-24 116.7 67 77.6
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 5.6e-24 115.2 92 62.0
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 2.8e-23 112.8 71 73.2
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 2.3e-22 109.8 91 53.8
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 5.2e-22 108.6 102 52.0
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 5.2e-22 108.6 112 50.9
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 1.7e-20 103.6 87 57.5
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 2.9e-20 102.8 108 50.9
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 3.2e-19 99.4 91 51.6
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 1.3e-17 94.0 97 56.7
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 9.5e-16 87.8 175 37.1
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 9.5e-16 87.8 89 46.1
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 9.2e-11 71.2 84 39.3
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.1e-10 70.1 89 48.3
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.1e-10 70.1 89 48.3
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 2.7e-10 69.7 40 77.5
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 2.5e-08 63.2 50 62.0


User provided reference genes

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