Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.2e-126 456.4 223 100.0
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 7.5e-84 314.3 222 70.3
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 5.4e-82 308.1 226 69.9
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 3.2e-79 298.9 227 68.3
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 1.6e-78 296.6 223 68.2
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 3.7e-75 285.4 185 74.6
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 4.9e-75 285.0 223 65.0
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 2.7e-73 279.3 222 65.3
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 1.9e-71 273.1 223 63.7
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 4.3e-71 271.9 173 75.1
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 7.3e-71 271.2 191 71.2
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 9.5e-71 270.8 223 63.7
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 1.2e-70 270.4 229 60.3
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.6e-70 270.0 192 70.3
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 2.8e-70 269.2 222 64.4
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 3.6e-70 268.9 224 62.1
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 4.7e-70 268.5 168 73.2
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 8.0e-70 267.7 217 63.1
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 8.0e-70 267.7 223 62.3
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 8.0e-70 267.7 170 73.5
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 8.0e-70 267.7 185 69.7
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 1.4e-69 266.9 191 68.1
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 1.8e-69 266.5 224 61.2
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 4.0e-69 265.4 172 72.7
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 4.0e-69 265.4 202 65.8
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 5.2e-69 265.0 226 60.2
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 6.8e-69 264.6 171 73.1
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 2.0e-68 263.1 175 71.4
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 2.0e-68 263.1 175 71.4
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 3.4e-68 262.3 173 69.9
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 3.4e-68 262.3 183 67.2
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 5.7e-68 261.5 183 68.9
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 5.7e-68 261.5 174 69.0
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 7.5e-68 261.2 193 67.9
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 7.5e-68 261.2 174 71.3
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 7.5e-68 261.2 174 69.0
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 7.5e-68 261.2 172 72.7
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 7.5e-68 261.2 172 72.1
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 9.8e-68 260.8 173 70.5
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 1.3e-67 260.4 166 73.5
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 1.3e-67 260.4 234 59.4
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 2.2e-67 259.6 230 59.1
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.9e-67 259.2 225 60.4
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 3.7e-67 258.8 190 67.4
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 4.9e-67 258.5 173 69.9
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 6.4e-67 258.1 225 60.0
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 1.1e-66 257.3 173 69.4
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 1.1e-66 257.3 211 62.1
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 1.4e-66 256.9 189 66.7
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.8e-66 256.5 165 73.3
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.8e-66 256.5 172 71.5
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 4.1e-66 255.4 171 71.3
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.1e-66 255.4 225 59.6
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.2e-65 253.8 184 65.8
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 1.2e-65 253.8 201 62.2
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 2.7e-65 252.7 185 65.4
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 7.8e-65 251.1 225 59.1
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 7.8e-65 251.1 196 65.3
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 1.0e-64 250.8 221 57.5
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 1.7e-64 250.0 202 65.3
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 2.3e-64 249.6 212 59.4
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 1.1e-63 247.3 175 64.6
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.5e-63 246.9 201 60.7
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.5e-63 246.9 176 66.5
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.9e-63 246.5 225 57.8
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 4.3e-63 245.4 169 68.6
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 2.1e-62 243.0 182 69.2
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 2.1e-62 243.0 172 65.1
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 3.6e-62 242.3 173 63.0
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 3.1e-61 239.2 165 66.1
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.6e-60 236.1 189 59.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 2.6e-60 236.1 243 53.1
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 4.4e-60 235.3 166 66.9
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 5.8e-60 235.0 182 63.2
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 9.8e-60 234.2 222 54.5
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 9.8e-60 234.2 204 57.8
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 2.9e-59 232.6 176 63.1
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 2.4e-58 229.6 194 64.4
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 5.4e-58 228.4 186 63.4
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 2.7e-57 226.1 161 65.8
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 3.5e-57 225.7 298 45.0
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 3.5e-57 225.7 142 76.1
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 6.6e-56 221.5 135 79.3
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.1e-55 220.7 191 60.2
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 3.6e-54 215.7 165 64.2
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 4.7e-54 215.3 138 75.4
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 2.0e-52 209.9 147 65.3
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 5.4e-50 201.8 139 64.7
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 2.1e-49 199.9 140 64.3
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 2.3e-45 186.4 125 68.8
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 6.8e-45 184.9 122 69.7
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 1.2e-44 184.1 122 70.5
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.4e-42 176.4 212 45.8
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 2.3e-40 169.9 190 44.2
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 7.3e-39 164.9 122 62.3
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 9.6e-39 164.5 210 43.3
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.4e-29 134.0 77 80.5
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 1.4e-26 124.0 74 74.3
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.9e-23 113.6 221 32.6
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.8e-11 72.8 108 47.2
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.3e-08 64.3 66 56.1
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 3.9e-08 62.8 51 68.6
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 7.4e-07 58.5 51 64.7
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 8.2e-06 55.1 97 46.4


User provided reference genes

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