Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold223G42874 Striga asiatica HOM05D008110 ORTHO05D000088 5.4e-95 350.9 167 100.0
Migut.J01193 Erythranthe guttata HOM05D008110 ORTHO05D000088 7.2e-31 137.9 156 44.9
Cc00_g00220 Coffea canephora HOM05D008110 ORTHO05D000088 3.1e-26 122.5 114 44.7
Nitab4.5_0001401g0140 Nicotiana tabacum HOM05D008110 ORTHO05D000088 4.2e-23 112.1 123 41.5
SalBow7G1050 Salvia bowleyana HOM05D008110 ORTHO05D000088 5.5e-23 111.7 121 45.5
CAN.G322.83 Capsicum annuum HOM05D008110 ORTHO05D000088 7.2e-23 111.3 111 42.3
Nitab4.5_0008194g0010 Nicotiana tabacum HOM05D008110 ORTHO05D000088 1.2e-22 110.5 123 40.7
Peaxi162Scf00016g01351 Petunia axillaris HOM05D008110 ORTHO05D000088 1.4e-21 107.1 112 41.1
Hma1.2p1_1527F.1_g289060 Hydrangea macrophylla HOM05D008110 ORTHO05D000088 8.8e-21 104.4 128 39.8
SGA_v2.0_scaffold54G19507 Striga asiatica HOM05D008110 ORTHO05D000088 3.3e-20 102.4 122 39.3
Migut.N02603 Erythranthe guttata HOM05D008110 ORTHO05D000088 2.2e-19 99.8 123 37.4
PGSC0003DMG401025831 Solanum tuberosum HOM05D008110 ORTHO05D000088 4.8e-19 98.6 106 42.5
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 4.8e-19 98.6 106 42.5
DCAR_022075 Daucus carota HOM05D008110 ORTHO05D000088 8.2e-19 97.8 111 38.7
Sopen01g051160 Solanum pennellii HOM05D008110 ORTHO05D000088 1.1e-18 97.4 110 40.0
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 1.8e-18 96.7 96 41.7
PGSC0003DMG400025830 Solanum tuberosum HOM05D008110 ORTHO05D000088 2.4e-18 96.3 119 37.8
Solyc01g108950.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 5.3e-18 95.1 110 40.0
CAN.G241.1 Capsicum annuum HOM05D008110 ORTHO05D000088 7.0e-18 94.7 102 36.3
Dinv42109 Davidia involucrata HOM05D008110 ORTHO05D000088 7.0e-18 94.7 132 31.8
Solyc01g106250.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 7.0e-18 94.7 123 35.8
Sopen01g048640 Solanum pennellii HOM05D008110 ORTHO05D000088 1.2e-17 94.0 106 38.7
PGSC0003DMG400010668 Solanum tuberosum HOM05D008110 ORTHO05D000088 1.2e-17 94.0 106 38.7
Rhsim11G0170700 Rhododendron simsii HOM05D008110 ORTHO05D000088 1.6e-17 93.6 118 37.3
Solyc01g109030.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 1.6e-17 93.6 103 40.8
MSTRG.17812 Avicennia marina HOM05D008110 ORTHO05D000088 4.5e-17 92.0 116 37.1
CSS0024769 Camellia sinensis var. sinensis HOM05D008110 ORTHO05D000088 8.5e-16 87.8 112 33.9
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 2.7e-14 82.8 94 36.2
Oeu003285.1 Olea europaea HOM05D008110 ORTHO05D000088 3.6e-14 82.4 119 39.5
RhsimUnG0089900 Rhododendron simsii HOM05D008110 ORTHO05D000088 4.7e-14 82.0 112 31.2
CAN.G322.59 Capsicum annuum HOM05D008110 ORTHO05D000088 1.0e-13 80.9 124 36.3
Eucgr.A01956 Eucalyptus grandis HOM05D008110 ORTHO05D000088 1.0e-13 80.9 99 36.4
SGA_v2.0_scaffold54G19506 Striga asiatica HOM05D008110 ORTHO05D000088 1.4e-13 80.5 151 31.1
CAN.G192.15 Capsicum annuum HOM05D008110 ORTHO05D000088 1.8e-13 80.1 116 29.3
Eucgr.I01213 Eucalyptus grandis HOM05D008110 ORTHO05D000088 3.0e-13 79.3 99 35.4
Solyc01g108940.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 4.0e-13 79.0 98 37.8
Atru.chr5.2872 Acer truncatum HOM05D000823 ORTHO05D000088 6.7e-13 78.2 134 32.1
CAN.G555.3 Capsicum annuum HOM05D008110 ORTHO05D000088 1.5e-12 77.0 103 33.0
Sopen02g006830 Solanum pennellii HOM05D008110 ORTHO05D000088 2.0e-12 76.6 97 39.2
SalBow3G0306 Salvia bowleyana HOM05D008110 ORTHO05D000088 7.5e-12 74.7 69 37.7
Duzib248G0315 Durio zibethinus HOM05D008110 ORTHO05D000088 3.7e-11 72.4 112 38.4
EL10Ac9g21796 Beta vulgaris HOM05D000823 ORTHO05D000088 1.1e-10 70.9 81 40.7
COL.COLO4_32520 Corchorus olitorius HOM05D008110 ORTHO05D000088 5.3e-10 68.6 137 32.8
Ah.01g019890 Amaranthus hybridus HOM05D001349 ORTHO05D001980 7.0e-10 68.2 81 37.0
PGR102G2553 Punica granatum HOM05D000823 ORTHO05D000088 1.2e-09 67.4 90 30.0
Rhsim02G0167400 Rhododendron simsii HOM05D008110 ORTHO05D000088 2.2e-08 63.2 88 29.5
PGSC0003DMG400044725 Solanum tuberosum HOM05D008110 ORTHO05D000088 5.0e-08 62.0 98 29.6
PGSC0003DMG400035405 Solanum tuberosum HOM05D008110 ORTHO05D000088 8.5e-08 61.2 70 37.1
ClCG01G016540 Citrullus lanatus HOM05D000395 ORTHO05D000088 1.9e-07 60.1 120 29.2
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 2.5e-07 59.7 150 23.3
Sopen01g051140 Solanum pennellii HOM05D008110 ORTHO05D000088 2.5e-07 59.7 79 36.7
CAN.G504.44 Capsicum annuum HOM05D000185 ORTHO05D000105 3.2e-07 59.3 80 36.2
Thhalv10028696m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 5.5e-07 58.5 126 28.6
PGSC0003DMG400044605 Solanum tuberosum HOM05D008110 ORTHO05D000088 7.2e-07 58.2 73 34.2
CAN.G192.14 Capsicum annuum HOM05D008110 ORTHO05D000088 9.4e-07 57.8 79 34.2
Psat6g109080 Pisum sativum HOM05D010195 ORTHO05D000088 1.2e-06 57.4 112 30.4
A10p17280 Brassica napus HOM05D009243 ORTHO05D011355 4.7e-06 55.5 108 27.8
C09p52630 Brassica napus HOM05D009243 ORTHO05D011355 4.7e-06 55.5 108 27.8
BolC9t58129H Brassica oleracea HOM05D009243 ORTHO05D011355 4.7e-06 55.5 108 27.8
BraA10t43811Z Brassica rapa HOM05D009243 ORTHO05D011355 4.7e-06 55.5 108 27.8
Sopen06g015150 Solanum pennellii HOM05D008110 ORTHO05D000088 6.1e-06 55.1 108 30.6


User provided reference genes

Program Settings