Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 9.3e-210 733.4 401 100.0
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 3.8e-86 322.8 423 50.6
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 6.5e-46 189.1 462 37.4
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 5.5e-45 186.0 481 37.8
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 2.0e-42 177.6 485 35.7
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 9.8e-34 148.7 448 33.5
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 1.7e-33 147.9 472 31.6
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 3.6e-28 130.2 441 31.5
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 1.8e-27 127.9 383 30.8
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 3.0e-27 127.1 397 33.0
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 1.7e-25 121.3 340 33.5
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 6.3e-25 119.4 259 35.5
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 1.4e-24 118.2 231 41.1
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 5.4e-24 116.3 406 31.8
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 5.4e-24 116.3 458 29.7
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 1.2e-23 115.2 412 32.0
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 1.6e-23 114.8 411 31.4
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 2.7e-23 114.0 412 32.3
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 2.7e-23 114.0 450 29.1
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 4.5e-23 113.2 206 41.3
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 5.9e-23 112.8 411 31.6
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 5.9e-23 112.8 475 31.2
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 2.9e-22 110.5 421 33.0
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 2.9e-22 110.5 420 31.2
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 1.1e-21 108.6 384 30.5
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 1.1e-21 108.6 414 31.6
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 1.5e-21 108.2 427 31.9
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 3.3e-21 107.1 410 32.7
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 4.3e-21 106.7 470 29.6
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 4.3e-21 106.7 449 28.1
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 5.6e-21 106.3 387 31.8
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 9.5e-21 105.5 426 29.6
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 9.5e-21 105.5 417 27.8
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 9.5e-21 105.5 198 43.4
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 1.6e-20 104.8 201 42.8
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 2.1e-20 104.4 446 30.5
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 4.7e-20 103.2 396 31.1
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 4.7e-20 103.2 269 34.6
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 6.1e-20 102.8 435 29.0
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 6.1e-20 102.8 384 31.5
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 1.0e-19 102.1 441 29.9
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 4.0e-19 100.1 391 31.2
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 6.8e-19 99.4 422 30.1
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 8.9e-19 99.0 424 29.7
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.2e-18 98.6 435 28.5
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 1.5e-18 98.2 479 29.2
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 2.6e-18 97.4 396 29.8
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 3.4e-18 97.1 412 29.9
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 4.4e-18 96.7 452 28.1
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 4.4e-18 96.7 426 30.3
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 7.5e-18 95.9 390 29.0
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 9.8e-18 95.5 439 28.2
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 1.3e-17 95.1 424 30.0
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 1.3e-17 95.1 455 27.5
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 1.7e-17 94.7 436 29.6
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 1.7e-17 94.7 436 29.6
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 3.7e-17 93.6 420 30.2
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 8.3e-17 92.4 430 28.8
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 8.3e-17 92.4 429 28.4
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 1.1e-16 92.0 392 30.1
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 1.1e-16 92.0 392 30.1
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 3.2e-16 90.5 198 37.4
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 3.2e-16 90.5 408 29.4
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 4.1e-16 90.1 417 28.3
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 5.4e-16 89.7 426 28.9
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 5.4e-16 89.7 479 29.0
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 7.0e-16 89.4 431 29.5
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 7.0e-16 89.4 173 38.2
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 1.2e-15 88.6 166 40.4
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 1.2e-15 88.6 420 30.0
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 1.6e-15 88.2 398 30.4
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.6e-15 88.2 446 29.4
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 2.0e-15 87.8 197 38.1
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 2.0e-15 87.8 446 30.3
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 2.7e-15 87.4 444 27.3
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 2.7e-15 87.4 467 28.3
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 3.5e-15 87.0 419 30.3
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 3.5e-15 87.0 446 30.0
BolC9t55570H Brassica oleracea HOM05D004305 ORTHO05D005159 5.9e-15 86.3 173 38.2
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 5.9e-15 86.3 166 40.4
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 7.8e-15 85.9 421 28.7
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 7.8e-15 85.9 436 28.2
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 7.8e-15 85.9 416 29.1
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 7.8e-15 85.9 250 29.2
BcaC04g21838 Brassica carinata HOM05D004305 ORTHO05D005159 1.7e-14 84.7 173 37.0
C09p26810 Brassica napus HOM05D004305 ORTHO05D005159 1.7e-14 84.7 173 37.0
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 2.3e-14 84.3 234 35.9
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 2.3e-14 84.3 176 37.5
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 3.0e-14 84.0 396 28.3
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 3.0e-14 84.0 396 28.3
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 3.9e-14 83.6 428 29.7
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 5.0e-14 83.2 432 27.5
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 8.6e-14 82.4 472 25.8
BcaB07g30530 Brassica carinata HOM05D004305 ORTHO05D005159 1.1e-13 82.0 205 36.6
Ca_00869_v3 Cicer arietinum L. HOM05D004305 ORTHO05D005159 1.1e-13 82.0 423 27.2
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.5e-13 81.6 197 37.1
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 1.5e-13 81.6 467 28.5
BraA09t37708Z Brassica rapa HOM05D004305 ORTHO05D005159 2.5e-13 80.9 174 38.5
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 2.5e-13 80.9 391 28.4
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 3.3e-13 80.5 434 30.4
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 3.3e-13 80.5 329 29.8
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 4.3e-13 80.1 193 36.3
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 4.3e-13 80.1 398 29.4
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 4.3e-13 80.1 386 28.5
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 4.3e-13 80.1 393 27.7
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 4.3e-13 80.1 408 27.2
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 4.3e-13 80.1 201 38.3
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 7.3e-13 79.3 404 26.5
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 7.3e-13 79.3 304 28.9
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 7.3e-13 79.3 304 28.9
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 7.3e-13 79.3 134 41.0
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 9.5e-13 79.0 300 29.3
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.2e-12 78.6 415 26.7
A09p21070 Brassica napus HOM05D004305 ORTHO05D005159 1.6e-12 78.2 175 37.1
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 1.6e-12 78.2 398 27.4
BcaB07g30950 Brassica carinata HOM05D004305 ORTHO05D005159 2.8e-12 77.4 175 37.7
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.8e-12 77.4 462 25.3
Carub.0008s0412 Capsella rubella HOM05D004305 ORTHO05D005159 3.6e-12 77.0 181 34.8
CARHR178780 Cardamine hirsuta HOM05D004305 ORTHO05D005159 6.2e-12 76.3 187 36.9
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 6.2e-12 76.3 366 28.7
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 1.1e-11 75.5 432 28.5
BcaC03g16656 Brassica carinata HOM05D004305 ORTHO05D005159 1.4e-11 75.1 176 37.5
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 2.3e-11 74.3 435 25.7
C07p27080 Brassica napus HOM05D004305 ORTHO05D005159 2.3e-11 74.3 170 36.5
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 2.3e-11 74.3 393 27.5
BcaC06g34566 Brassica carinata HOM05D004305 ORTHO05D005159 5.2e-11 73.2 170 36.5
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 5.2e-11 73.2 169 34.9
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 8.9e-11 72.4 222 33.8
Thhalv10003311m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 8.9e-11 72.4 397 30.7
BraA02t07875Z Brassica rapa HOM05D004305 ORTHO05D005159 1.2e-10 72.0 187 34.2
A02p28380 Brassica napus HOM05D004305 ORTHO05D005159 1.5e-10 71.6 177 37.3
CiPaw.09G142800 Carya illinoinensis HOM05D004305 ORTHO05D005159 1.5e-10 71.6 169 37.9
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 3.4e-10 70.5 448 27.0
BcaC06g31624 Brassica carinata HOM05D004305 ORTHO05D005159 5.8e-10 69.7 182 37.9
BolC7t43238H Brassica oleracea HOM05D004305 ORTHO05D005159 7.5e-10 69.3 170 35.9
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 9.8e-10 68.9 191 37.7
BraA06t27598Z Brassica rapa HOM05D004305 ORTHO05D005159 1.3e-09 68.6 174 34.5
Sed0024509 Sechium edule HOM05D004305 ORTHO05D005159 2.9e-09 67.4 423 26.2
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 2.9e-09 67.4 430 26.5
Actinidia32347 Actinidia chinensis HOM05D004305 ORTHO05D005159 3.7e-09 67.0 450 26.9
AL8G15540 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 4.9e-09 66.6 399 26.6
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 4.9e-09 66.6 185 31.4
AT5G44350 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 6.4e-09 66.2 387 26.9
BolC2t10530H Brassica oleracea HOM05D004305 ORTHO05D005159 6.4e-09 66.2 150 38.0
Nn2g11492 Nelumbo nucifera HOM05D004305 ORTHO05D005159 8.3e-09 65.9 112 37.5
A06p47270 Brassica napus HOM05D004305 ORTHO05D005159 5.4e-08 63.2 169 35.5
Sed0021635 Sechium edule HOM05D004305 ORTHO05D005159 1.6e-07 61.6 305 31.1
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 3.5e-07 60.5 65 50.8
ECA247G2099 Erigeron canadensis HOM05D004305 ORTHO05D005159 1.0e-06 58.9 402 26.1
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.0e-06 58.9 465 22.2
Medtr4g094532 Medicago truncatula HOM05D004305 ORTHO05D005159 1.3e-06 58.5 175 32.6
Aqoxy1G01487 Aquilegia oxysepala HOM05D004305 ORTHO05D005159 3.9e-06 57.0 433 24.2


User provided reference genes

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