Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 6.6e-99 364.0 180 100.0
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 4.5e-55 218.4 189 65.6
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 2.0e-39 166.4 192 50.5
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 1.4e-32 143.7 189 50.8
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 1.1e-29 134.0 146 47.3
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 1.5e-29 133.7 190 41.6
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 2.1e-28 129.8 198 40.9
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.8e-27 126.7 183 41.0
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 4.0e-27 125.6 192 39.6
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 8.8e-27 124.4 146 44.5
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 8.8e-27 124.4 102 57.8
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.2e-26 124.0 175 41.1
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 1.2e-26 124.0 181 41.4
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 2.0e-26 123.2 166 41.0
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 3.4e-26 122.5 118 48.3
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 3.4e-26 122.5 107 52.3
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 4.4e-26 122.1 157 42.7
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 5.7e-26 121.7 107 52.3
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 5.7e-26 121.7 87 62.1
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 7.5e-26 121.3 142 46.5
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 9.8e-26 120.9 107 52.3
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 9.8e-26 120.9 115 48.7
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 9.8e-26 120.9 147 42.2
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 1.3e-25 120.6 115 47.0
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 1.7e-25 120.2 192 39.6
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 2.2e-25 119.8 118 48.3
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 2.8e-25 119.4 158 42.4
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 2.8e-25 119.4 88 61.4
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 2.8e-25 119.4 107 50.5
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 2.8e-25 119.4 116 49.1
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 3.7e-25 119.0 114 48.2
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 4.9e-25 118.6 105 52.4
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 6.3e-25 118.2 88 60.2
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 6.3e-25 118.2 104 53.8
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 6.3e-25 118.2 107 51.4
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 6.3e-25 118.2 88 60.2
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 6.3e-25 118.2 157 40.8
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 8.3e-25 117.9 88 60.2
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 8.3e-25 117.9 135 46.7
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 1.1e-24 117.5 90 57.8
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 1.4e-24 117.1 146 45.9
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 1.4e-24 117.1 89 57.3
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 1.4e-24 117.1 158 41.8
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 1.4e-24 117.1 104 51.9
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 1.4e-24 117.1 88 60.2
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 1.4e-24 117.1 164 41.5
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 1.8e-24 116.7 105 53.3
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 1.8e-24 116.7 117 49.6
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 2.4e-24 116.3 114 49.1
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 2.4e-24 116.3 109 49.5
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 2.4e-24 116.3 186 37.1
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 2.4e-24 116.3 109 48.6
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 3.1e-24 115.9 155 37.4
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 4.1e-24 115.5 102 52.9
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 4.1e-24 115.5 86 59.3
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 5.4e-24 115.2 110 50.0
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 5.4e-24 115.2 110 50.0
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 5.4e-24 115.2 110 50.0
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 5.4e-24 115.2 112 48.2
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 5.4e-24 115.2 99 54.5
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 5.4e-24 115.2 90 57.8
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 7.0e-24 114.8 112 49.1
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 7.0e-24 114.8 111 51.4
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 9.2e-24 114.4 88 58.0
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 9.2e-24 114.4 88 58.0
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 9.2e-24 114.4 88 56.8
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 1.2e-23 114.0 138 42.0
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 1.2e-23 114.0 87 59.8
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.6e-23 113.6 110 50.0
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 1.6e-23 113.6 88 58.0
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 1.6e-23 113.6 88 58.0
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 1.6e-23 113.6 88 56.8
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 2.0e-23 113.2 88 58.0
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 2.0e-23 113.2 105 50.5
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 2.0e-23 113.2 110 50.0
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 2.7e-23 112.8 114 46.5
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 2.7e-23 112.8 88 55.7
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 4.5e-23 112.1 138 41.3
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 4.5e-23 112.1 108 49.1
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 4.5e-23 112.1 88 56.8
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 4.5e-23 112.1 155 43.2
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 5.9e-23 111.7 161 39.1
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 5.9e-23 111.7 89 55.1
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 5.9e-23 111.7 174 37.4
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 7.8e-23 111.3 88 58.0
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.0e-22 110.9 88 54.5
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 1.0e-22 110.9 87 55.2
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 1.3e-22 110.5 141 40.4
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 2.9e-22 109.4 109 46.8
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 2.9e-22 109.4 109 46.8
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 2.9e-22 109.4 88 55.7
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 3.8e-22 109.0 109 48.6
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 3.8e-22 109.0 86 53.5
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.8e-22 109.0 86 53.5
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.8e-22 109.0 86 53.5
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 5.0e-22 108.6 88 53.4
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 6.6e-22 108.2 150 40.7
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.6e-22 107.8 86 53.5
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.1e-21 107.5 86 53.5
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 1.5e-21 107.1 87 56.3
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 1.9e-21 106.7 88 53.4
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 1.9e-21 106.7 88 53.4
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 1.9e-21 106.7 88 53.4
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 1.9e-21 106.7 88 53.4
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.5e-21 106.3 86 53.5
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 3.3e-21 105.9 111 46.8
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 4.3e-21 105.5 76 61.8
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 4.3e-21 105.5 145 41.4
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 5.6e-21 105.1 87 52.9
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 5.6e-21 105.1 87 52.9
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 5.6e-21 105.1 87 52.9
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 7.3e-21 104.8 110 45.5
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 7.3e-21 104.8 110 45.5
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 9.5e-21 104.4 105 44.8
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 3.6e-20 102.4 88 54.5
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 1.5e-18 97.1 99 45.5
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 8.3e-17 91.3 69 56.5
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 2.4e-16 89.7 86 45.3
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 3.2e-16 89.4 70 51.4
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 9.2e-16 87.8 125 34.4
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 2.7e-15 86.3 81 49.4
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 8.6e-14 81.3 66 50.0
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 9.5e-13 77.8 88 44.3
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 9.5e-13 77.8 79 43.0
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.2e-10 70.9 88 40.9
SGA_v2.0_scaffold134G34742 Striga asiatica HOM05D005893 ORTHO05D007295 7.5e-10 68.2 106 42.5
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 9.8e-10 67.8 49 55.1
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 2.7e-07 59.7 131 29.8
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 5.0e-06 55.5 88 37.5


User provided reference genes

Program Settings