Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 1.5e-150 536.2 271 100.0
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 5.8e-38 162.2 190 51.1
MBI19_g32860_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 4.0e-31 139.4 160 54.4
SGA_v2.0_scaffold21G09498 Striga asiatica HOM05D008620 ORTHO05D011304 1.5e-30 137.5 157 52.2
Zm00001eb237130 Zea mays HOM05D008620 ORTHO05D011304 7.8e-27 125.2 148 52.7
MBI13_g43924_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 9.9e-22 108.2 236 39.0
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 9.2e-20 101.7 103 56.3
MBI12_g22442_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 2.7e-19 100.1 212 38.7
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 4.6e-19 99.4 103 56.3
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 7.8e-19 98.6 86 60.5
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 2.3e-18 97.1 102 53.9
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 2.3e-18 97.1 102 53.9
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 8.7e-18 95.1 102 54.9
FAN14G3868 Fragaria x ananassa HOM05D008620 ORTHO05D011304 3.3e-17 93.2 93 58.1
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 4.3e-17 92.8 105 50.5
MBI13_g43923_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 1.6e-16 90.9 219 36.5
SGA_v2.0_scaffold44G16610 Striga asiatica HOM05D008620 ORTHO05D011304 1.6e-16 90.9 99 53.5
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 4.7e-16 89.4 144 44.4
Lsat_1_v5_gn_2_129941 Lactuca sativa HOM05D008620 ORTHO05D011304 5.3e-15 85.9 69 62.3
FAN19G0360 Fragaria x ananassa HOM05D008620 ORTHO05D011304 1.9e-12 77.4 63 63.5
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 1.9e-12 77.4 103 47.6
FAN28G0556 Fragaria x ananassa HOM05D008620 ORTHO05D011304 9.3e-12 75.1 63 61.9
Os03g0430575 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 7.8e-11 72.0 102 47.1
Os03g0158800 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 1.1e-07 61.6 64 53.1
SGA_v2.0_scaffold121G33145 Striga asiatica HOM05D010876 ORTHO05D011353 4.0e-07 59.7 49 61.2
FAN23G0514 Fragaria x ananassa HOM05D028908 ORTHO05D025601 1.2e-06 58.2 75 45.3
FAN19G2694 Fragaria x ananassa HOM05D028908 ORTHO05D025601 1.5e-06 57.8 75 45.3
FAN26G1909 Fragaria x ananassa HOM05D028908 ORTHO05D025601 1.5e-06 57.8 75 45.3
FAN28G2800 Fragaria x ananassa HOM05D028908 ORTHO05D025601 2.6e-06 57.0 75 44.0
CiPaw.01G017100 Carya illinoinensis HOM05D017562 ORTHO05D011353 4.5e-06 56.2 53 54.7
Potri.001G113533 Populus trichocarpa HOM05D016397 ORTHO05D011353 7.6e-06 55.5 60 51.7


User provided reference genes

Program Settings