Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold221G42721 Striga asiatica HOM05D008413 ORTHO05D000401 1.3e-163 579.7 298 100.0
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 1.3e-123 446.8 363 70.0
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-122 443.4 361 67.9
SGA_v2.0_scaffold22G09929 Striga asiatica HOM05D008413 ORTHO05D000401 8.4e-99 364.4 262 75.6
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 5.3e-85 318.5 328 56.4
SGA_v2.0_scaffold55G19853 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-56 224.2 307 47.9
SGA_v2.0_scaffold84G26501 Striga asiatica HOM05D008413 ORTHO05D000401 7.7e-36 155.2 186 53.8
SGA_v2.0_scaffold53G19291 Striga asiatica HOM05D008413 ORTHO05D000401 2.3e-32 143.7 108 70.4
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 4.9e-30 136.0 357 31.1
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 5.4e-29 132.5 357 31.9
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 4.6e-28 129.4 316 33.2
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 7.8e-28 128.6 357 30.8
SGA_v2.0_scaffold241G44187 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-26 124.8 109 75.2
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-21 108.2 256 30.9
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 9.2e-21 105.1 247 31.2
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 6.0e-20 102.4 326 30.7
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 1.3e-19 101.3 294 31.0
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 6.6e-19 99.0 319 31.3
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 2.5e-18 97.1 290 31.0
SGA_v2.0_scaffold86G26910 Striga asiatica HOM05D008413 ORTHO05D000401 2.5e-18 97.1 178 38.8
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 1.6e-17 94.4 399 26.1
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 1.8e-16 90.9 246 28.0
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 2.3e-16 90.5 273 33.0
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 2.3e-16 90.5 273 33.0
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 3.1e-16 90.1 275 27.6
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 2.6e-15 87.0 235 30.2
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 2.9e-14 83.6 183 32.8
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 1.9e-13 80.9 304 29.9
Atru.chr11.187 Acer truncatum HOM05D008413 ORTHO05D000401 3.5e-12 76.6 105 41.0
SGA_v2.0_scaffold231G43417 Striga asiatica HOM05D008413 ORTHO05D000401 3.5e-12 76.6 78 50.0
PSO339G5332 Papaver somniferum HOM05D008413 ORTHO05D000401 1.7e-11 74.3 324 25.6
SGA_v2.0_scaffold309G48177 Striga asiatica HOM05D001576 ORTHO05D000401 5.6e-10 69.3 171 30.4
SGA_v2.0_scaffold260G45865 Striga asiatica HOM05D001576 ORTHO05D000401 1.6e-09 67.8 171 29.8
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 4.7e-09 66.2 121 35.5
SGA_v2.0_scaffold17G08026 Striga asiatica HOM05D008413 ORTHO05D000401 8.1e-09 65.5 210 27.6
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-08 64.7 91 38.5
FvH4_3g26413 Fragaria vesca HOM05D001576 ORTHO05D000401 2.3e-08 63.9 113 35.4
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 2.3e-08 63.9 126 31.7
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 2.3e-08 63.9 126 31.7
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-08 62.8 91 37.4
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-08 62.8 91 37.4
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-08 62.8 91 37.4
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.2e-08 62.8 91 37.4
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 5.2e-08 62.8 262 24.4
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-08 62.4 91 37.4
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 8.9e-08 62.0 93 36.6
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.2e-07 61.6 113 33.6
FvH4_3g31921 Fragaria vesca HOM05D001576 ORTHO05D000401 1.5e-07 61.2 152 31.6
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.5e-07 61.2 93 36.6
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.0e-07 60.8 93 36.6
Os07g0554400 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 3.4e-07 60.1 97 37.1
RhsimUnG0137500 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.4e-07 60.1 96 37.5
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 3.4e-07 60.1 113 38.1
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 3.4e-07 60.1 113 38.1
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 4.4e-07 59.7 144 34.0
PSO017G1655 Papaver somniferum HOM05D008413 ORTHO05D000401 4.4e-07 59.7 84 39.3
QL09p033218 Quercus lobata HOM05D001576 ORTHO05D000401 4.4e-07 59.7 130 30.0
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 7.6e-07 58.9 143 32.9
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.6e-07 58.9 91 35.2
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.6e-07 58.9 91 35.2
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 9.9e-07 58.5 90 37.8
SGA_v2.0_scaffold4G02509 Striga asiatica HOM05D008413 ORTHO05D000401 1.3e-06 58.2 272 26.5
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 1.7e-06 57.8 95 34.7
Prupe.1G172500 Prunus persica HOM05D001576 ORTHO05D000401 2.2e-06 57.4 79 41.8
SGA_v2.0_scaffold19G08588 Striga asiatica HOM05D001576 ORTHO05D000401 2.2e-06 57.4 252 26.2
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 2.9e-06 57.0 81 40.7
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.8e-06 56.6 115 30.4
SGA_v2.0_scaffold18G08316 Striga asiatica HOM05D008413 ORTHO05D000401 3.8e-06 56.6 103 33.0
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.4e-06 55.8 85 35.3
FAN14G0954 Fragaria x ananassa HOM05D001576 ORTHO05D000401 6.4e-06 55.8 202 27.7
Os02g0463725 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 6.4e-06 55.8 113 36.3
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.4e-06 55.5 96 33.3
Carub.0336s0001 Capsella rubella HOM05D000589 ORTHO05D000401 8.4e-06 55.5 127 31.5
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 8.4e-06 55.5 127 29.9
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 8.4e-06 55.5 127 29.9
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.4e-06 55.5 104 33.7


User provided reference genes

Program Settings