Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold221G42656 Striga asiatica HOM05D010852 ORTHO05D002376 0.0e+00 1326.6 665 100.0
SGA_v2.0_scaffold59G20735 Striga asiatica HOM05D010852 ORTHO05D002376 5.4e-162 575.5 711 51.3
SGA_v2.0_scaffold250G44995 Striga asiatica HOM05D010852 ORTHO05D002376 3.3e-135 486.5 714 46.1
SGA_v2.0_scaffold29G12331 Striga asiatica HOM05D010852 ORTHO05D002376 3.2e-130 469.9 649 47.8
SGA_v2.0_scaffold167G38409 Striga asiatica HOM05D010852 ORTHO05D002376 2.7e-113 413.7 682 42.7
SGA_v2.0_scaffold237G43840 Striga asiatica HOM05D010852 ORTHO05D002376 2.5e-34 151.4 264 36.4
SGA_v2.0_scaffold237G43867 Striga asiatica HOM05D010852 ORTHO05D002376 5.2e-32 143.7 241 36.5
SGA_v2.0_scaffold26G11253 Striga asiatica HOM05D010852 ORTHO05D002376 4.1e-29 134.0 240 35.0
SGA_v2.0_scaffold56G19931 Striga asiatica HOM05D010852 ORTHO05D002376 3.9e-27 127.5 619 23.7
SGA_v2.0_scaffold49G18177 Striga asiatica HOM05D010852 ORTHO05D002376 4.7e-25 120.6 251 32.3
SGA_v2.0_scaffold244G44377 Striga asiatica HOM05D010852 ORTHO05D002376 1.2e-20 105.9 211 32.2
SGA_v2.0_scaffold38G15017 Striga asiatica HOM05D026572 ORTHO05D002376 3.4e-15 87.8 272 28.7
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 4.9e-14 84.0 161 32.3
SGA_v2.0_scaffold82G26258 Striga asiatica HOM05D010852 ORTHO05D002376 7.8e-12 76.6 136 35.3
SGA_v2.0_scaffold44G16632 Striga asiatica HOM05D010852 ORTHO05D002376 1.3e-11 75.9 116 39.7
C09p45320 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-10 70.9 188 27.7
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 7.3e-10 70.1 210 27.6
SGA_v2.0_scaffold100G29549 Striga asiatica HOM05D000096 ORTHO05D000045 1.2e-09 69.3 113 36.3
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 2.8e-09 68.2 154 24.7
SGA_v2.0_scaffold192G40512 Striga asiatica HOM05D010852 ORTHO05D002376 2.8e-09 68.2 85 42.4
SGA_v2.0_scaffold53G19301 Striga asiatica HOM05D027983 ORTHO05D002376 4.7e-09 67.4 112 33.0
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 6.2e-09 67.0 210 26.2
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 1.8e-08 65.5 169 24.9
LjContig00155g0001945 Lotus japonicus HOM05D000353 ORTHO05D000174 4.0e-08 64.3 191 23.0
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 5.2e-08 63.9 155 27.7
arahy.Tifrunner.gnm1.ann1.1DX3V0 Arachis hypogaea HOM05D007334 ORTHO05D009978 6.8e-08 63.5 129 32.6
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 6.8e-08 63.5 148 29.1
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 8.9e-08 63.2 95 34.7
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 62.8 289 24.2
QL03p038017 Quercus lobata HOM05D000313 ORTHO05D000065 1.2e-07 62.8 100 31.0
SGA_v2.0_scaffold10G05136 Striga asiatica HOM05D026782 ORTHO05D002376 1.2e-07 62.8 47 61.7
A09p28970 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-07 62.4 153 27.5
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 1.5e-07 62.4 162 21.6
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-07 62.0 95 30.5
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-07 62.0 180 26.7
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 2.0e-07 62.0 180 26.7
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 2.0e-07 62.0 161 23.6
DCAR_004276 Daucus carota HOM05D002907 ORTHO05D000065 2.6e-07 61.6 135 25.2
SGA_v2.0_scaffold143G35813 Striga asiatica HOM05D027983 ORTHO05D002376 2.6e-07 61.6 100 32.0
SGA_v2.0_scaffold72G24053 Striga asiatica HOM05D027983 ORTHO05D002376 2.6e-07 61.6 100 32.0
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-07 61.2 130 28.5
Lj6g0015228 Lotus japonicus HOM05D007499 ORTHO05D000174 3.4e-07 61.2 216 24.5
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-07 60.8 134 27.6
SGA_v2.0_scaffold45G17295 Striga asiatica HOM05D027983 ORTHO05D002376 4.4e-07 60.8 100 32.0
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 60.5 235 25.1
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 5.8e-07 60.5 113 28.3
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-07 60.5 251 24.3
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 5.8e-07 60.5 113 28.3
BraA09t38461Z Brassica rapa HOM05D000353 ORTHO05D000174 5.8e-07 60.5 194 24.2
DCAR_001457 Daucus carota HOM05D002907 ORTHO05D000065 5.8e-07 60.5 126 27.8
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 5.8e-07 60.5 141 27.0
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 7.6e-07 60.1 126 29.4
DCAR_024664 Daucus carota HOM05D020096 ORTHO05D014614 7.6e-07 60.1 174 25.3
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 7.6e-07 60.1 153 28.8
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 9.9e-07 59.7 110 29.1
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 9.9e-07 59.7 130 28.5
DCAR_000518 Daucus carota HOM05D002907 ORTHO05D000065 9.9e-07 59.7 129 25.6
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-06 59.3 126 28.6
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-06 59.3 138 29.0
arahy.Tifrunner.gnm1.ann1.6R53Z4 Arachis hypogaea HOM05D007334 ORTHO05D009978 1.7e-06 58.9 136 27.2
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-06 58.9 110 29.1
Lj6g0021814 Lotus japonicus HOM05D007499 ORTHO05D010522 1.7e-06 58.9 172 28.5
Phvul.007G143500 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 2.2e-06 58.5 144 28.5
BcaB06g27107 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-06 58.2 119 27.7
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 3.8e-06 57.8 87 32.2
TPR.G37532 Trifolium pratense HOM05D002090 ORTHO05D001923 3.8e-06 57.8 150 25.3
Lj5g0027118 Lotus japonicus HOM05D007499 ORTHO05D010522 4.9e-06 57.4 166 27.7
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 4.9e-06 57.4 125 29.6
QL01p044591 Quercus lobata HOM05D002907 ORTHO05D005554 4.9e-06 57.4 125 29.6
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 4.9e-06 57.4 162 30.2
Sp2g07180 Schrenkiella parvula HOM05D000305 ORTHO05D000065 4.9e-06 57.4 135 28.9
TPR.G34060 Trifolium pratense HOM05D011527 ORTHO05D009491 4.9e-06 57.4 146 23.3
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.4e-06 57.0 218 23.9
arahy.Tifrunner.gnm1.ann1.BHW5G9 Arachis hypogaea HOM05D002441 ORTHO05D002376 8.4e-06 56.6 189 23.8
arahy.Tifrunner.gnm1.ann1.XQZ42W Arachis hypogaea HOM05D002441 ORTHO05D002376 8.4e-06 56.6 189 23.8
Carub.0007s3608 Capsella rubella HOM05D000353 ORTHO05D000174 8.4e-06 56.6 219 26.9
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 8.4e-06 56.6 142 27.5
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 8.4e-06 56.6 161 26.1
SGA_v2.0_scaffold252G45102 Striga asiatica HOM05D026572 ORTHO05D002376 8.4e-06 56.6 138 33.3


User provided reference genes

Program Settings