Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.0e-162 576.6 286 100.0
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.0e-85 320.9 246 67.9
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 2.3e-85 319.7 237 68.8
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.9e-79 300.1 246 63.8
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 2.4e-74 283.1 197 69.5
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 3.1e-74 282.7 191 70.7
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 2.0e-73 280.0 191 70.2
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 2.0e-73 280.0 191 70.2
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 4.5e-73 278.9 188 69.1
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 1.3e-72 277.3 194 68.0
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.4e-71 273.1 194 67.5
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 1.6e-70 270.4 188 66.0
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 1.6e-70 270.4 246 56.5
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 1.6e-70 270.4 172 75.0
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 2.1e-70 270.0 194 66.0
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 2.1e-70 270.0 184 66.3
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 3.5e-70 269.2 193 67.4
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 6.0e-70 268.5 243 58.4
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 6.0e-70 268.5 180 71.1
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 7.9e-70 268.1 197 67.0
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 1.0e-69 267.7 189 67.2
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 1.0e-69 267.7 183 67.8
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 6.7e-69 265.0 189 65.6
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 1.5e-68 263.8 184 66.3
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.9e-68 263.5 194 64.4
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 3.3e-68 262.7 194 64.4
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 4.3e-68 262.3 239 56.1
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.3e-67 260.8 204 60.8
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 2.1e-67 260.0 190 64.2
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 2.8e-67 259.6 154 76.6
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 2.8e-67 259.6 154 76.6
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 4.8e-67 258.8 192 65.6
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 8.1e-67 258.1 193 62.7
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.1e-66 257.7 204 61.8
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.8e-66 256.9 253 52.2
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.8e-66 256.9 183 66.7
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.8e-66 256.9 191 64.9
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 2.4e-66 256.5 177 66.1
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 2.4e-66 256.5 199 59.3
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 5.8e-65 251.9 172 69.8
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 7.6e-65 251.5 155 72.3
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.2e-64 250.0 200 59.5
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 4.9e-64 248.8 230 53.0
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 8.4e-64 248.1 193 57.5
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 1.9e-63 246.9 190 60.5
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 2.5e-63 246.5 187 61.5
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 3.2e-63 246.1 185 59.5
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 4.2e-63 245.7 194 57.7
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 9.3e-63 244.6 191 60.2
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 9.3e-63 244.6 246 52.0
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 2.7e-62 243.0 183 60.7
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.7e-62 243.0 183 59.6
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 4.6e-62 242.3 154 70.1
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 7.9e-62 241.5 188 61.2
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 7.9e-62 241.5 187 60.4
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 7.9e-62 241.5 183 59.6
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.0e-61 241.1 183 63.4
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 1.3e-61 240.7 185 60.0
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.8e-61 240.4 195 57.9
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.8e-61 240.4 183 58.5
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 2.3e-61 240.0 183 60.7
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 3.0e-61 239.6 228 54.8
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 3.0e-61 239.6 183 59.6
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 3.9e-61 239.2 207 57.0
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 6.7e-61 238.4 186 58.6
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 8.7e-61 238.0 183 62.3
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 8.7e-61 238.0 184 63.0
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 8.7e-61 238.0 185 58.4
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.1e-60 237.7 183 62.3
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 1.1e-60 237.7 191 59.2
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.5e-60 237.3 184 61.4
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 1.5e-60 237.3 160 70.0
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 1.9e-60 236.9 175 62.3
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 2.5e-60 236.5 201 57.7
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 4.3e-60 235.7 186 61.8
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 5.7e-60 235.3 246 51.6
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 7.4e-60 235.0 186 61.8
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 7.4e-60 235.0 161 65.2
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 4.8e-59 232.3 187 60.4
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 6.3e-59 231.9 186 60.8
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.8e-58 230.3 203 57.1
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.4e-58 229.9 187 57.8
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 3.1e-58 229.6 186 59.7
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 4.1e-58 229.2 183 61.2
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 5.3e-58 228.8 186 59.7
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 6.9e-58 228.4 223 51.6
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 1.2e-57 227.6 174 62.6
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.0e-57 226.9 186 58.6
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 5.9e-57 225.3 190 58.9
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 8.5e-56 221.5 190 55.3
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.1e-55 221.1 187 58.3
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 1.4e-55 220.7 296 42.2
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 2.5e-55 219.9 183 60.7
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.1e-54 216.9 194 59.3
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.0e-53 214.5 199 56.8
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 3.0e-53 213.0 185 55.1
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.1e-50 204.5 120 76.7
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 1.4e-50 204.1 188 53.7
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 3.2e-47 193.0 185 47.6
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 7.4e-44 181.8 196 45.4
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 1.8e-42 177.2 169 49.1
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 1.5e-36 157.5 127 60.6
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 1.5e-36 157.5 155 43.2
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 4.1e-34 149.4 136 54.4
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 5.5e-31 139.0 158 41.1
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.7e-30 136.0 112 61.6
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.8e-27 125.9 90 68.9
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.2e-25 121.3 190 36.8
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 4.7e-22 109.4 198 33.8
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.0e-20 104.0 140 40.0
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 3.4e-20 103.2 66 63.6
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-19 99.0 77 62.3
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 3.5e-09 66.6 58 53.4
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 5.0e-08 62.8 38 68.4
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 5.0e-08 62.8 51 52.9
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 2.5e-07 60.5 32 75.0


User provided reference genes

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