Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 3.1e-165 585.1 308 100.0
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 2.4e-72 276.6 313 56.9
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 3.2e-69 266.2 316 55.4
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 9.4e-69 264.6 313 55.9
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 2.4e-64 250.0 304 57.9
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 2.9e-62 243.0 300 56.3
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 3.1e-48 196.4 295 48.5
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 3.5e-47 193.0 298 46.3
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 4.7e-44 182.6 302 46.4
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 2.6e-42 176.8 294 45.9
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 3.4e-42 176.4 306 42.5
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 3.7e-41 172.9 299 43.8
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 1.4e-40 171.0 301 45.2
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 1.4e-40 171.0 314 43.6
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 4.1e-40 169.5 303 43.9
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 5.4e-40 169.1 301 44.9
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 7.0e-40 168.7 336 39.6
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.3e-38 164.5 314 43.3
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 1.7e-38 164.1 305 43.0
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 8.6e-38 161.8 234 48.7
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 3.3e-37 159.8 299 43.8
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 8.0e-36 155.2 299 41.5
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 3.0e-35 153.3 300 42.7
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 3.0e-35 153.3 301 43.5
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 1.2e-34 151.4 274 44.5
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.5e-34 151.0 306 40.5
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 2.0e-34 150.6 310 41.3
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.6e-34 150.2 306 40.5
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 5.7e-34 149.1 315 39.0
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 7.5e-34 148.7 279 41.2
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 1.3e-33 147.9 308 42.5
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 2.8e-33 146.7 301 40.2
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 8.3e-33 145.2 169 56.2
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.3e-33 145.2 304 39.8
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 1.8e-32 144.1 314 37.9
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 3.1e-32 143.3 310 40.3
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 4.1e-32 142.9 285 42.1
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 5.4e-32 142.5 294 41.2
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 7.0e-32 142.1 306 40.8
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 9.2e-32 141.7 294 40.8
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 2.0e-31 140.6 172 52.9
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 2.0e-31 140.6 330 37.6
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.7e-31 140.2 297 43.1
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 3.5e-31 139.8 290 42.1
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 3.5e-31 139.8 290 42.1
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 5.9e-31 139.0 311 38.6
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 1.7e-30 137.5 174 52.3
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 2.3e-30 137.1 324 37.3
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 8.6e-30 135.2 290 38.3
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.1e-29 134.8 321 37.7
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 1.5e-29 134.4 321 41.1
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 1.5e-29 134.4 310 39.0
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 2.5e-29 133.7 294 38.8
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 4.3e-29 132.9 302 41.7
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.3e-29 132.9 321 37.7
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 5.6e-29 132.5 299 42.1
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 5.6e-29 132.5 299 42.1
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 5.6e-29 132.5 299 42.1
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 9.5e-29 131.7 172 52.3
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 1.6e-28 131.0 297 38.4
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 2.1e-28 130.6 313 39.9
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 2.8e-28 130.2 149 55.0
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 4.7e-28 129.4 317 40.1
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 4.7e-28 129.4 301 37.2
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 1.8e-27 127.5 310 39.0
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 1.8e-27 127.5 311 37.6
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 1.8e-27 127.5 302 38.1
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 2.3e-27 127.1 297 40.1
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 3.1e-27 126.7 313 39.6
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 1.5e-26 124.4 318 38.7
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 2.0e-26 124.0 353 36.8
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 2.0e-26 124.0 167 50.9
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 2.6e-26 123.6 285 38.6
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 2.6e-26 123.6 152 53.9
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 3.4e-26 123.2 268 42.2
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 4.4e-26 122.9 295 38.3
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 5.8e-26 122.5 351 36.2
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 9.8e-26 121.7 306 37.6
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.3e-25 121.3 297 37.0
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 1.7e-25 120.9 302 37.4
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.7e-25 120.9 188 47.9
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 2.2e-25 120.6 280 38.9
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 2.2e-25 120.6 189 43.4
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 4.9e-25 119.4 263 39.2
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 4.9e-25 119.4 305 39.0
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 2.4e-24 117.1 321 35.8
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.4e-24 117.1 321 35.8
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 3.2e-24 116.7 321 35.8
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 4.1e-24 116.3 215 40.5
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 7.0e-24 115.5 299 36.8
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.2e-23 114.8 249 39.8
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.0e-23 114.0 228 40.8
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 2.0e-23 114.0 170 45.9
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 7.8e-23 112.1 294 35.0
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 7.8e-23 112.1 305 34.8
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 7.8e-23 112.1 345 34.8
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 1.0e-22 111.7 308 34.7
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 1.9e-21 107.5 214 39.3
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 3.3e-21 106.7 306 34.0
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 4.3e-21 106.3 285 35.1
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 7.3e-21 105.5 327 36.4
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 1.2e-20 104.8 181 39.8
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 1.6e-20 104.4 299 35.8
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.6e-20 103.2 210 43.3
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 4.7e-20 102.8 267 36.7
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 1.4e-19 101.3 268 36.9
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 2.3e-19 100.5 258 35.3
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.3e-19 100.5 152 46.7
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 4.0e-19 99.8 291 34.4
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 6.8e-19 99.0 265 35.1
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 2.0e-18 97.4 308 37.3
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.8e-18 95.9 131 50.4
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 8.3e-17 92.0 95 63.2
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 7.8e-15 85.5 60 71.7
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 6.6e-14 82.4 225 33.8
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.2e-12 78.2 70 61.4
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.1e-12 77.4 70 61.4
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 1.4e-11 74.7 58 74.1
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.7e-09 67.8 61 59.0
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 3.7e-09 66.6 182 38.5
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 7.8e-07 58.9 42 71.4
unitig_18.g30059 Utricularia gibba HOM05D006245 ORTHO05D007260 8.6e-06 55.5 64 43.8


User provided reference genes

Program Settings