Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 2.3e-60 235.3 115 100.0
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 9.6e-27 123.6 114 49.1
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 2.1e-26 122.5 99 59.6
SGA_v2.0_scaffold106G30719 Striga asiatica HOM05D015252 ORTHO05D002765 8.2e-26 120.6 92 58.7
SGA_v2.0_scaffold16G07749 Striga asiatica HOM05D015252 ORTHO05D002765 3.0e-20 102.1 88 58.0
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 4.6e-13 78.2 99 37.4
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 6.1e-13 77.8 98 37.8
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 3.9e-12 75.1 99 36.4
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 3.9e-12 75.1 99 36.4
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 3.9e-12 75.1 99 36.4
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 3.9e-12 75.1 99 36.4
SGA_v2.0_scaffold78G25421 Striga asiatica HOM05D015252 ORTHO05D002765 1.1e-11 73.6 49 65.3
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 1.5e-11 73.2 103 31.1
SGA_v2.0_scaffold17G08056 Striga asiatica HOM05D010396 ORTHO05D002765 2.0e-11 72.8 102 33.3
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-10 70.1 104 28.8
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-10 68.6 99 34.3
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 4.8e-10 68.2 99 34.3
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 6.3e-10 67.8 101 34.7
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-09 66.6 99 27.3
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 3.1e-09 65.5 106 34.0
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 4.1e-09 65.1 106 33.0
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 4.1e-09 65.1 106 33.0
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 5.3e-09 64.7 106 33.0
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 5.3e-09 64.7 106 33.0
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 5.3e-09 64.7 99 26.3
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 6.9e-09 64.3 106 33.0
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 6.9e-09 64.3 106 33.0
CANSAT21G2439 Cannabis sativa HOM05D010396 ORTHO05D002765 6.9e-09 64.3 106 33.0
CANSAT25G2859 Cannabis sativa HOM05D010396 ORTHO05D002765 6.9e-09 64.3 106 33.0
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 6.9e-09 64.3 106 33.0
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 6.9e-09 64.3 106 33.0
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 6.9e-09 64.3 99 30.3
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 9.1e-09 63.9 99 32.3
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 9.1e-09 63.9 99 33.3
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.2e-08 63.5 99 30.3
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 2.0e-08 62.8 93 33.3
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-08 62.0 101 30.7
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-08 62.0 99 30.3
SGA_v2.0_scaffold308G48118 Striga asiatica HOM05D012404 ORTHO05D002765 3.4e-08 62.0 85 31.8
CANSAT64G1249 Cannabis sativa HOM05D010396 ORTHO05D002765 4.5e-08 61.6 91 34.1
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 7.7e-08 60.8 109 31.2
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-07 60.5 90 32.2
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-07 60.1 103 27.2
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-07 59.3 90 32.2
SGA_v2.0_scaffold213G42219 Striga asiatica HOM05D015252 ORTHO05D002765 2.2e-07 59.3 41 58.5
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 2.9e-07 58.9 94 28.7
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 6.5e-07 57.8 95 29.5
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.5e-07 57.4 95 26.3
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-06 57.0 95 25.3
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-06 56.6 103 24.3
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-06 56.2 96 24.0
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-06 56.2 95 25.3
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-06 56.2 97 25.8
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-06 55.8 103 28.2
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-06 55.1 95 26.3
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 4.2e-06 55.1 94 25.5
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 4.2e-06 55.1 94 25.5
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.5e-06 54.7 93 28.0
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.5e-06 54.7 95 26.3
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-06 54.3 95 25.3
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-06 54.3 95 24.2
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 7.2e-06 54.3 55 41.8
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.4e-06 53.9 95 25.3
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 9.4e-06 53.9 92 25.0


User provided reference genes

Program Settings