Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold220G42609 Striga asiatica HOM05D004939 ORTHO05D005843 4.8e-200 701.0 375 100.0
SGA_v2.0_scaffold227G43179 Striga asiatica HOM05D004939 ORTHO05D005843 9.9e-105 384.4 427 53.9
Migut.N02996 Erythranthe guttata HOM05D004939 ORTHO05D005843 5.3e-98 362.1 377 55.4
MSTRG.22074 Avicennia marina HOM05D004939 ORTHO05D005843 1.4e-95 354.0 380 53.9
SalBow6G2808 Salvia bowleyana HOM05D004939 ORTHO05D005843 4.6e-94 349.0 377 52.5
unitig_85.g27224 Utricularia gibba HOM05D004939 ORTHO05D005843 6.2e-75 285.4 385 44.7
CSS0014437 Camellia sinensis var. sinensis HOM05D004939 ORTHO05D005843 1.1e-74 284.6 377 45.6
Actinidia37902 Actinidia chinensis HOM05D004939 ORTHO05D005843 1.8e-74 283.9 378 44.4
QL02p016036 Quercus lobata HOM05D004939 ORTHO05D005843 5.3e-74 282.3 376 44.9
Hma1.2p1_0914F.1_g236160 Hydrangea macrophylla HOM05D004939 ORTHO05D005843 2.6e-73 280.0 379 42.5
Cc10_g00160 Coffea canephora HOM05D004939 ORTHO05D005843 5.8e-73 278.9 394 44.9
Haze_22877 Corylus avellana HOM05D004939 ORTHO05D005843 7.6e-73 278.5 338 47.9
CiPaw.07G131300 Carya illinoinensis HOM05D004939 ORTHO05D005843 1.0e-72 278.1 377 44.3
CSS0031643 Camellia sinensis var. sinensis HOM05D004939 ORTHO05D005843 1.7e-72 277.3 378 45.2
TAR381G1514 Trochodendron aralioides HOM05D000924 ORTHO05D001209 1.7e-72 277.3 377 44.8
Nn5g31070 Nelumbo nucifera HOM05D004939 ORTHO05D005843 2.9e-72 276.6 377 43.2
Nitab4.5_0000464g0110 Nicotiana tabacum HOM05D004939 ORTHO05D005843 5.0e-72 275.8 381 43.8
Potri.002G002900 Populus trichocarpa HOM05D004939 ORTHO05D005843 1.9e-71 273.9 377 43.8
CAN.G1330.25 Capsicum annuum HOM05D004939 ORTHO05D005843 3.2e-71 273.1 378 44.4
TWI56G0687 Tripterygium wilfordii HOM05D004939 ORTHO05D005843 4.2e-71 272.7 377 41.4
GSVIVG01013446001 Vitis vinifera HOM05D004939 ORTHO05D005843 4.2e-71 272.7 377 44.0
Ciclev10001515m.g Citrus clementina HOM05D004939 ORTHO05D005843 2.7e-70 270.0 378 42.9
DCAR_023017 Daucus carota HOM05D004939 ORTHO05D005843 4.6e-70 269.2 380 42.9
Cfa014153 Carpinus fangiana HOM05D004939 ORTHO05D005843 6.1e-70 268.9 378 43.1
Peaxi162Scf00385g00719 Petunia axillaris HOM05D004939 ORTHO05D005843 6.1e-70 268.9 384 44.8
Sopen04g036540 Solanum pennellii HOM05D004939 ORTHO05D005843 6.1e-70 268.9 379 43.8
Potri.005G258300 Populus trichocarpa HOM05D004939 ORTHO05D005843 7.9e-70 268.5 376 43.4
Duzib128G1725 Durio zibethinus HOM05D004939 ORTHO05D005843 2.3e-69 266.9 377 43.2
Prupe.5G002900 Prunus persica HOM05D004939 ORTHO05D005843 2.3e-69 266.9 381 41.5
Solyc04g082900.4 Solanum lycopersicum HOM05D004939 ORTHO05D005843 2.3e-69 266.9 379 43.5
PGSC0003DMG400010009 Solanum tuberosum HOM05D004939 ORTHO05D005843 3.0e-69 266.5 382 44.0
ECA238G2856 Erigeron canadensis HOM05D004939 ORTHO05D005843 3.9e-69 266.2 386 43.3
Gohir.D05G283800 Gossypium hirsutum HOM05D004939 ORTHO05D005843 1.6e-67 260.8 377 43.2
Gohir.D05G283802 Gossypium hirsutum HOM05D004939 ORTHO05D005843 1.6e-67 260.8 377 43.5
Gorai.009G298300 Gossypium raimondii HOM05D004939 ORTHO05D005843 1.6e-67 260.8 377 43.5
HanXRQChr14g0427951 Helianthus annuus HOM05D004939 ORTHO05D005843 2.2e-67 260.4 381 43.6
Manes.05G129700 Manihot esculenta HOM05D004939 ORTHO05D005843 3.7e-67 259.6 379 43.0
Thecc.10G149200 Theobroma cacao HOM05D004939 ORTHO05D005843 1.4e-66 257.7 377 42.4
Gohir.A05G282600 Gossypium hirsutum HOM05D004939 ORTHO05D005843 4.1e-66 256.1 377 42.7
Eucgr.F03614 Eucalyptus grandis HOM05D004939 ORTHO05D005843 1.2e-65 254.6 377 42.2
Lsat_1_v5_gn_2_3201 Lactuca sativa HOM05D004939 ORTHO05D005843 2.0e-65 253.8 378 41.5
PGR031G2869 Punica granatum HOM05D004939 ORTHO05D005843 4.2e-63 246.1 377 40.3
Dinv23346 Davidia involucrata HOM05D004939 ORTHO05D005843 5.5e-63 245.7 333 43.8
RcHm_v2.0_Chr7g0217371 Rosa chinensis HOM05D004939 ORTHO05D005843 3.0e-61 240.0 379 40.6
Aqoxy6G03042 Aquilegia oxysepala HOM05D004939 ORTHO05D005843 6.7e-61 238.8 386 39.1
Rhsim06G0001700 Rhododendron simsii HOM05D004939 ORTHO05D005843 6.7e-61 238.8 421 39.0
FAN13G2929 Fragaria x ananassa HOM05D004939 ORTHO05D005843 2.0e-60 237.3 379 40.4
PSO170G6093 Papaver somniferum HOM05D004939 ORTHO05D005843 3.3e-60 236.5 377 40.6
FvH4_5g26460 Fragaria vesca HOM05D004939 ORTHO05D005843 4.3e-60 236.1 383 39.9
FAN04G1628 Fragaria x ananassa HOM05D004939 ORTHO05D005843 5.7e-60 235.7 383 39.7
PSO017G2996 Papaver somniferum HOM05D004939 ORTHO05D005843 1.7e-59 234.2 377 40.3
FAN18G1404 Fragaria x ananassa HOM05D004939 ORTHO05D005843 4.8e-59 232.6 378 39.9
Lj4A813T64 Lonicera japonica HOM05D004939 ORTHO05D005843 1.1e-58 231.5 332 42.2
FAN08G1940 Fragaria x ananassa HOM05D004939 ORTHO05D005843 1.8e-58 230.7 378 39.9
ATR0605G152 Amborella trichopoda HOM05D004939 ORTHO05D005843 2.4e-58 230.3 392 37.5
Sed0003879 Sechium edule HOM05D004939 ORTHO05D005843 2.0e-57 227.3 388 37.4
Ca_12499_v3 Cicer arietinum L. HOM05D004939 ORTHO05D005843 1.3e-56 224.6 377 38.7
Lalb_Chr10g0095291 Lupinus albus HOM05D004939 ORTHO05D005843 2.2e-56 223.8 379 39.8
Phvul.003G009000 Phaseolus vulgaris HOM05D004939 ORTHO05D005843 2.2e-56 223.8 380 37.1
THA.LOC104805020 Tarenaya hassleriana HOM05D004939 ORTHO05D005843 2.2e-56 223.8 382 39.5
arahy.Tifrunner.gnm1.ann1.6I9FYE Arachis hypogaea HOM05D004939 ORTHO05D005843 3.8e-56 223.0 379 39.3
Sabra02G0001700 Salix brachista HOM05D004939 ORTHO05D005843 5.0e-56 222.6 414 37.9
Glyma.20G006600 Glycine max HOM05D004939 ORTHO05D005843 8.5e-56 221.9 377 37.7
TPR.G22378 Trifolium pratense HOM05D004939 ORTHO05D005843 1.4e-55 221.1 395 38.0
arahy.Tifrunner.gnm1.ann1.V9NZM2 Arachis hypogaea HOM05D004939 ORTHO05D005843 3.2e-55 219.9 379 39.1
BcaB06g28697 Brassica carinata HOM05D004939 ORTHO05D005843 4.2e-55 219.5 387 36.2
Glyma.07G159700 Glycine max HOM05D004939 ORTHO05D005843 3.6e-54 216.5 377 37.7
VMungo1215G1457 Vigna mungo HOM05D004939 ORTHO05D005843 7.9e-54 215.3 377 35.5
CsaV3_4G037720 Cucumis sativus L. HOM05D004939 ORTHO05D005843 1.4e-53 214.5 375 37.3
Medtr1g035090 Medicago truncatula HOM05D004939 ORTHO05D005843 1.4e-53 214.5 387 37.5
C04p15520 Brassica napus HOM05D004939 ORTHO05D005843 3.9e-53 213.0 388 36.9
BolC4t23123H Brassica oleracea HOM05D004939 ORTHO05D005843 3.9e-53 213.0 388 36.9
Thhalv10016779m.g Eutrema salsugineum HOM05D004939 ORTHO05D005843 6.7e-53 212.2 387 37.5
AT2G33560 Arabidopsis thaliana HOM05D004939 ORTHO05D005843 8.8e-53 211.8 390 37.7
Lalb_Chr17g0338141 Lupinus albus HOM05D004939 ORTHO05D005843 8.8e-53 211.8 378 37.6
BcaC02g11440 Brassica carinata HOM05D004939 ORTHO05D005843 1.1e-52 211.5 388 36.6
ClCG11G019130 Citrullus lanatus HOM05D004939 ORTHO05D005843 4.8e-51 206.1 394 36.3
Sp4g15900 Schrenkiella parvula HOM05D004939 ORTHO05D005843 8.2e-51 205.3 386 36.3
MELO3C017066.2 Cucumis melo HOM05D004939 ORTHO05D005843 1.1e-50 204.9 376 36.4
EL10Ac1g01845 Beta vulgaris HOM05D004939 ORTHO05D005843 1.4e-50 204.5 394 35.8
CARHR127580 Cardamine hirsuta HOM05D004939 ORTHO05D005843 2.4e-50 203.8 395 36.5
Aa31LG9G13490 Aethionema arabicum HOM05D004939 ORTHO05D005843 5.3e-50 202.6 384 37.8
Lj2g0017318 Lotus japonicus HOM05D004939 ORTHO05D005843 7.0e-50 202.2 376 36.4
AL4G29230 Arabidopsis lyrata HOM05D004939 ORTHO05D005843 1.2e-49 201.4 390 37.2
A05p11970 Brassica napus HOM05D004939 ORTHO05D005843 1.2e-49 201.4 397 35.5
BraA05t20140Z Brassica rapa HOM05D004939 ORTHO05D005843 1.2e-49 201.4 390 35.6
Carub.0004s1519 Capsella rubella HOM05D004939 ORTHO05D005843 1.5e-49 201.1 389 37.0
BcaB02g10574 Brassica carinata HOM05D004939 ORTHO05D005843 2.6e-49 200.3 391 35.8
Oeu035772.5 Olea europaea HOM05D004939 ORTHO05D005843 1.1e-47 194.9 201 56.2
Hund05067 Selenicereus undatus HOM05D004939 ORTHO05D005843 1.2e-46 191.4 403 34.2
Psat6g131960 Pisum sativum HOM05D004939 ORTHO05D005843 4.7e-46 189.5 460 32.8
Sabra05G0200000 Salix brachista HOM05D004939 ORTHO05D005843 4.0e-45 186.4 239 46.4
CANSAT11G2529 Cannabis sativa HOM05D004939 ORTHO05D005843 5.2e-45 186.0 387 34.1
Atru.chr13.32 Acer truncatum HOM05D004939 ORTHO05D005843 4.4e-44 183.0 203 53.7
Os02g0193600 Oryza sativa ssp. japonica HOM05D004939 ORTHO05D005843 2.2e-40 170.6 362 34.3
Sc02g0009340 Simmondsia chinensis HOM05D004939 ORTHO05D005843 1.4e-37 161.4 346 35.5
AUR62035188 Chenopodium quinoa HOM05D004939 ORTHO05D005843 1.2e-36 158.3 200 47.0
Zm00001eb236510 Zea mays HOM05D004939 ORTHO05D005843 2.2e-35 154.1 365 33.2
C04p63070 Brassica napus HOM05D004939 ORTHO05D005843 1.6e-30 137.9 336 31.8
BolC4t27782H Brassica oleracea HOM05D004939 ORTHO05D005843 1.6e-30 137.9 336 31.8
BcaC09g49204 Brassica carinata HOM05D004939 ORTHO05D005843 1.8e-29 134.4 204 42.6
C01p41420 Brassica napus HOM05D004939 ORTHO05D005843 1.8e-29 134.4 204 43.6
BolC1t04101H Brassica oleracea HOM05D004939 ORTHO05D005843 5.2e-29 132.9 204 43.1
TAR625G0897 Trochodendron aralioides HOM05D004939 ORTHO05D005843 6.8e-29 132.5 269 35.3
BcaB05g22459 Brassica carinata HOM05D004939 ORTHO05D005843 9.8e-28 128.6 367 32.2
HPP92_020523 Vanilla planifolia HOM05D004939 ORTHO05D005843 9.8e-28 128.6 197 40.1
MD06G1001900 Malus domestica HOM05D004939 ORTHO05D005843 2.8e-27 127.1 108 61.1
BcaC08g45668 Brassica carinata HOM05D004939 ORTHO05D005843 1.1e-26 125.2 199 40.7
BcaC02g07802 Brassica carinata HOM05D004939 ORTHO05D005843 1.8e-26 124.4 381 29.4
Hma1.2p1_0914F.1_g236170 Hydrangea macrophylla HOM05D004939 ORTHO05D005843 4.5e-25 119.8 216 35.6
COL.COLO4_20704 Corchorus olitorius HOM05D004939 ORTHO05D005843 2.9e-24 117.1 76 71.1
MD00G1178400 Malus domestica HOM05D004939 ORTHO05D005843 2.9e-24 117.1 76 72.4
SMO361G0676 Selaginella moellendorffii HOM05D004939 ORTHO05D005843 1.5e-23 114.8 362 27.3
MBI04_g18018_MAGBIO Magnolia biondii HOM05D004939 ORTHO05D005843 3.3e-23 113.6 365 29.0
SMO361G0195 Selaginella moellendorffii HOM05D004939 ORTHO05D005843 9.5e-23 112.1 361 27.1
C06p34250 Brassica napus HOM05D004939 ORTHO05D005843 5.2e-21 106.3 202 37.1
BraA02t08500Z Brassica rapa HOM05D004939 ORTHO05D005843 2.0e-20 104.4 188 38.8
BolC6t38544H Brassica oleracea HOM05D004939 ORTHO05D005843 1.3e-19 101.7 197 36.5
Pp3c24_5040 Physcomitrium patens HOM05D004939 ORTHO05D005843 5.4e-18 96.3 378 26.5
Cpa.g.sc36.110 Carica papaya HOM05D004939 ORTHO05D005843 2.0e-17 94.4 97 52.6
SEGI_14150 Sequoiadendron giganteum HOM05D004939 ORTHO05D005843 4.6e-17 93.2 74 58.1
SEGI_18344 Sequoiadendron giganteum HOM05D004939 ORTHO05D005843 1.2e-14 85.1 142 37.3
Cfa009998 Carpinus fangiana HOM05D004939 ORTHO05D005843 1.3e-11 75.1 58 58.6
Mapoly0009s0056 Marchantia polymorpha HOM05D006085 ORTHO05D007559 3.7e-11 73.6 380 24.2
Psat0ss2830g0360 Pisum sativum HOM05D004939 ORTHO05D005843 1.9e-10 71.2 114 43.9
BraA02t04781Z Brassica rapa HOM05D004939 ORTHO05D005843 9.2e-10 68.9 175 33.1
CDE05G0313 Ceratophyllum demersum HOM05D004939 ORTHO05D005843 5.0e-08 63.2 107 38.3
GSVIVG01023487001 Vitis vinifera HOM05D004939 ORTHO05D005843 1.5e-07 61.6 45 64.4
AagrBONN_evm.TU.Sc2ySwM_228.5262 Anthoceros agrestis HOM05D004939 ORTHO05D005843 1.2e-06 58.5 61 45.9
AagrBONN_evm.TU.Sc2ySwM_228.5265 Anthoceros agrestis HOM05D004939 ORTHO05D005843 1.2e-06 58.5 61 45.9
GSVIVG01011261001 Vitis vinifera HOM05D004939 ORTHO05D005843 1.2e-06 58.5 45 60.0
CBR_g40020 Chara braunii HOM05D004939 ORTHO05D005843 8.1e-06 55.8 62 43.5


User provided reference genes

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