Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 4.5e-106 387.9 188 100.0
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.6e-74 283.1 162 82.1
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.5e-72 276.6 158 81.6
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.0e-70 270.4 158 76.6
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.3e-70 269.2 158 77.2
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 5.2e-70 268.1 158 77.2
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 5.2e-70 268.1 160 75.6
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 8.8e-70 267.3 160 75.6
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 2.0e-69 266.2 166 74.1
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.6e-69 265.8 160 74.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.3e-68 263.5 154 79.2
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 2.8e-68 262.3 158 74.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 3.7e-68 261.9 161 72.7
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 3.7e-68 261.9 159 73.6
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 3.7e-68 261.9 158 72.2
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.7e-68 261.9 162 75.3
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 8.3e-68 260.8 158 74.7
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 1.4e-67 260.0 157 73.9
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.4e-67 260.0 158 75.3
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.4e-67 260.0 159 73.6
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.8e-67 259.6 159 72.3
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 3.1e-67 258.8 159 71.7
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 4.1e-67 258.5 158 72.2
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 4.1e-67 258.5 158 72.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.1e-67 258.5 159 71.7
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 5.4e-67 258.1 158 71.5
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 5.4e-67 258.1 158 72.2
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 7.0e-67 257.7 159 71.1
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 7.0e-67 257.7 158 71.5
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 9.1e-67 257.3 162 71.6
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 9.1e-67 257.3 157 73.2
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 9.1e-67 257.3 158 72.2
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 2.0e-66 256.1 158 73.4
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.0e-66 256.1 154 75.3
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 2.0e-66 256.1 158 72.8
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 2.7e-66 255.8 158 72.2
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 2.7e-66 255.8 159 73.0
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 4.5e-66 255.0 158 71.5
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.5e-66 255.0 157 73.9
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 4.5e-66 255.0 157 73.9
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 4.5e-66 255.0 162 72.8
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 5.9e-66 254.6 157 75.8
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 5.9e-66 254.6 158 72.8
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 7.7e-66 254.2 162 71.6
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 7.7e-66 254.2 154 75.3
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 7.7e-66 254.2 158 72.2
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.0e-65 253.8 162 71.6
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.0e-65 253.8 158 72.8
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.3e-65 253.4 149 76.5
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.3e-65 253.4 157 74.5
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.3e-65 253.4 157 74.5
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.3e-65 253.4 157 74.5
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 1.7e-65 253.1 158 71.5
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.7e-65 253.1 157 73.2
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.7e-65 253.1 149 75.2
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.3e-65 252.7 155 75.5
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.3e-65 252.7 163 69.9
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 2.9e-65 252.3 158 71.5
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.9e-65 252.3 159 74.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.9e-65 252.3 158 72.8
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.0e-65 251.5 154 76.0
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 5.0e-65 251.5 158 72.2
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 6.5e-65 251.1 167 67.7
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 6.5e-65 251.1 157 71.3
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 8.6e-65 250.8 166 68.1
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 8.6e-65 250.8 158 70.9
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 8.6e-65 250.8 158 70.9
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 1.1e-64 250.4 158 71.5
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.1e-64 250.4 158 70.9
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.2e-64 248.8 154 72.7
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 4.2e-64 248.4 158 72.2
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.5e-64 248.1 158 70.9
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 9.5e-64 247.3 160 68.8
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 9.5e-64 247.3 155 73.5
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.2e-63 246.9 158 71.5
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.6e-63 246.5 158 69.6
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.6e-63 246.5 158 69.6
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.6e-63 246.5 159 71.7
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 2.1e-63 246.1 159 71.1
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 8.0e-63 244.2 157 72.6
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.4e-62 243.4 148 75.0
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.4e-62 243.4 152 72.4
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 2.3e-62 242.7 158 68.4
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 3.0e-62 242.3 159 71.1
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 3.0e-62 242.3 154 70.8
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 8.8e-62 240.7 160 70.0
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.2e-61 240.4 154 70.1
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-61 240.4 152 69.7
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-61 240.4 152 70.4
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.6e-61 239.2 142 77.5
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 4.4e-61 238.4 159 68.6
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 6.3e-60 234.6 211 54.0
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 8.3e-60 234.2 147 74.8
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 1.1e-59 233.8 158 69.6
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 3.5e-58 228.8 135 77.8
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 5.9e-58 228.0 139 71.9
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.7e-57 226.5 135 75.6
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 2.9e-57 225.7 157 65.0
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 3.8e-57 225.3 158 65.8
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.1e-56 223.8 135 73.3
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.8e-54 216.5 135 72.6
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 3.0e-54 215.7 116 87.1
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 3.7e-52 208.8 138 71.0
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.2e-50 203.8 117 80.3
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.3e-49 200.3 140 62.1
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 2.5e-48 196.1 147 59.9
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.5e-48 196.1 121 71.9
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.3e-48 195.7 152 62.5
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.3e-48 195.3 140 61.4
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.3e-48 195.3 115 78.3
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 2.8e-47 192.6 114 77.2
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.1e-46 190.7 188 52.7
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.5e-45 186.8 136 64.7
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 5.4e-43 178.3 114 70.2
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 2.7e-42 176.0 157 57.3
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 1.3e-41 173.7 158 55.1
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 4.7e-39 165.2 96 75.0
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.1e-38 164.1 95 76.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.4e-38 163.7 129 60.5
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.3e-36 157.1 168 49.4
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 3.2e-35 152.5 102 66.7
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 7.1e-35 151.4 157 52.9
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 8.9e-30 134.4 85 74.1
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.4e-29 132.5 135 51.1
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 9.9e-29 131.0 97 64.9
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.1e-22 110.9 67 74.6
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 6.0e-18 95.1 57 73.7
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 2.1e-15 86.7 58 67.2
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 3.7e-07 59.3 68 44.1


User provided reference genes

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