Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 1.6e-172 609.4 325 100.0
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 1.2e-146 523.5 326 82.5
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 2.2e-129 466.1 321 74.5
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 6.5e-129 464.5 321 74.5
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 4.1e-123 445.3 339 70.2
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 2.9e-121 439.1 327 73.4
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 2.7e-119 432.6 322 73.6
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.3e-116 423.7 321 67.3
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 2.2e-116 422.9 319 70.5
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 2.8e-116 422.5 322 68.3
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 2.4e-115 419.5 314 68.2
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 1.2e-114 417.2 322 67.4
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 3.5e-114 415.6 322 67.1
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 7.7e-114 414.5 328 66.2
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 7.2e-112 407.9 321 66.4
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 4.7e-111 405.2 328 64.3
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 8.0e-111 404.4 327 65.1
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 1.4e-110 403.7 322 67.1
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 3.1e-107 392.5 327 64.8
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 2.7e-106 389.4 290 70.0
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 1.1e-104 384.0 322 60.6
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 3.3e-104 382.5 372 57.3
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 4.7e-103 378.6 319 61.4
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 6.1e-103 378.3 328 61.3
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 2.3e-102 376.3 328 60.7
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 3.0e-102 375.9 315 61.3
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 2.6e-101 372.9 315 62.5
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 1.7e-100 370.2 319 60.8
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 2.2e-100 369.8 328 61.0
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 2.9e-100 369.4 322 59.9
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 4.9e-100 368.6 326 59.8
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 6.4e-100 368.2 322 59.9
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 1.1e-99 367.5 331 59.2
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 1.4e-99 367.1 326 61.0
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 4.1e-99 365.5 310 59.7
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 4.1e-99 365.5 326 59.2
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 7.0e-99 364.8 333 58.3
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 7.0e-99 364.8 332 57.8
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 2.0e-98 363.2 315 62.2
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 1.0e-97 360.9 333 58.0
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 1.3e-97 360.5 321 59.2
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 1.7e-97 360.1 326 58.3
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 2.3e-97 359.8 323 61.3
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 5.0e-97 358.6 326 57.1
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 1.9e-96 356.7 323 60.4
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 3.3e-96 355.9 333 58.3
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 9.5e-96 354.4 315 59.7
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 1.6e-95 353.6 293 63.5
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 4.7e-95 352.1 315 59.0
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 1.0e-94 350.9 322 58.7
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 1.2e-93 347.4 319 58.6
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 1.5e-93 347.1 319 59.6
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 3.7e-92 342.4 318 56.0
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 3.7e-92 342.4 316 58.2
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 8.3e-92 341.3 318 57.5
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 3.2e-91 339.3 318 57.5
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 2.7e-90 336.3 321 57.0
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 7.8e-90 334.7 324 56.2
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 1.0e-89 334.3 318 53.8
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 1.3e-89 334.0 318 55.3
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 1.3e-89 334.0 322 56.2
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 1.3e-89 334.0 324 55.6
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 8.6e-89 331.3 318 54.4
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 1.1e-88 330.9 319 54.2
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 1.5e-88 330.5 318 54.1
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 1.5e-88 330.5 279 61.6
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 5.6e-88 328.6 368 53.0
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 9.5e-88 327.8 317 53.9
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 9.5e-88 327.8 323 55.1
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.6e-87 327.0 232 67.2
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 1.6e-87 327.0 318 56.3
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 8.1e-87 324.7 319 53.6
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 1.1e-86 324.3 314 54.8
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 1.8e-86 323.6 319 53.3
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 1.8e-86 323.6 318 52.5
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 3.1e-86 322.8 318 52.8
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 6.8e-86 321.6 321 53.0
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 1.5e-85 320.5 326 55.2
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 7.5e-85 318.2 314 54.1
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 1.3e-84 317.4 321 53.6
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 2.9e-84 316.2 318 52.2
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 6.4e-84 315.1 321 54.8
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 6.4e-84 315.1 286 59.8
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 8.3e-84 314.7 313 53.7
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 1.1e-83 314.3 323 52.9
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 7.1e-83 311.6 318 51.9
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 3.5e-82 309.3 323 52.9
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 6.0e-82 308.5 319 51.7
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 7.8e-82 308.1 322 53.1
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.0e-81 307.8 321 53.3
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 7.3e-80 301.6 314 50.0
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 3.6e-79 299.3 318 50.0
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.1e-78 297.7 327 52.6
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 1.8e-78 297.0 317 53.9
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 6.8e-78 295.0 323 51.7
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 6.8e-78 295.0 345 49.6
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 1.5e-77 293.9 323 51.4
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 2.2e-76 290.0 281 56.9
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 6.4e-76 288.5 315 49.5
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 1.1e-75 287.7 334 48.5
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 1.9e-75 287.0 319 48.9
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 1.9e-75 287.0 318 48.7
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 1.9e-75 287.0 318 48.7
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 1.9e-75 287.0 319 48.9
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 2.4e-75 286.6 319 49.5
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 9.2e-75 284.6 317 50.8
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 1.6e-74 283.9 328 50.0
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 3.5e-74 282.7 320 53.8
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 7.8e-74 281.6 311 49.2
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 7.8e-74 281.6 317 48.9
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 3.9e-73 279.3 325 47.7
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.9e-72 276.9 322 48.8
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 4.3e-72 275.8 326 50.3
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 3.6e-71 272.7 325 49.2
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 4.7e-71 272.3 297 49.5
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 6.2e-71 271.9 329 46.8
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 6.2e-71 271.9 316 46.5
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 5.8e-69 265.4 312 47.8
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 1.7e-68 263.8 328 47.0
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 1.9e-67 260.4 318 47.2
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 3.2e-67 259.6 323 45.2
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 3.5e-66 256.1 326 44.5
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 6.9e-62 241.9 274 58.0
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 1.5e-61 240.7 191 61.8
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 7.6e-61 238.4 211 64.9
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 2.2e-60 236.9 323 43.3
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 1.3e-55 221.1 205 53.7
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.8e-55 219.9 325 43.1
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 3.1e-54 216.5 280 48.6
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.3e-52 211.1 307 41.0
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 1.7e-52 210.7 307 43.6
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 1.9e-51 207.2 293 46.8
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.8e-49 200.7 324 38.0
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 1.1e-46 191.4 318 38.7
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 9.0e-46 188.3 211 46.9
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 1.6e-42 177.6 185 49.7
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 3.5e-42 176.4 142 59.2
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 3.3e-40 169.9 302 35.4
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.7e-36 157.5 322 37.3
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 7.9e-26 122.1 115 55.7
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.3e-23 114.8 113 56.6
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.1e-22 111.7 169 44.4
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 2.4e-22 110.5 206 38.8
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.7e-20 104.4 242 33.1
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 8.5e-20 102.1 157 40.8
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 1.9e-19 100.9 115 54.8
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 1.6e-18 97.8 115 55.7
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 6.7e-17 92.4 185 33.0
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 8.8e-17 92.0 112 55.4
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.3e-16 90.1 101 54.5
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 1.3e-15 88.2 206 31.6
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 5.3e-14 82.8 225 30.7
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 2.2e-12 77.4 112 46.4
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.9e-12 77.0 79 53.2
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.0e-09 68.6 175 29.1
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.4e-09 68.2 52 61.5
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 4.4e-08 63.2 305 24.3
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 4.1e-06 56.6 79 38.0


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