Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 0.0e+00 1083.9 553 100.0
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 3.3e-197 692.2 552 65.4
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 2.5e-189 666.0 503 70.0
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 1.5e-186 656.8 553 63.3
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 3.9e-182 642.1 474 71.3
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 1.1e-179 634.0 550 62.0
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 4.0e-179 632.1 548 61.3
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 1.7e-177 626.7 555 58.9
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 1.1e-176 624.0 508 64.4
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 7.1e-176 621.3 479 66.4
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 2.1e-175 619.8 483 66.0
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 5.1e-174 615.1 510 63.1
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 6.6e-174 614.8 558 59.9
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 1.1e-173 614.0 553 60.2
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 1.9e-173 613.2 486 65.2
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 1.9e-173 613.2 489 64.0
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 3.3e-173 612.5 478 66.1
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 4.3e-173 612.1 496 63.3
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 5.6e-173 611.7 485 64.9
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 5.6e-173 611.7 485 65.6
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 5.6e-173 611.7 504 62.5
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 9.6e-173 610.9 483 64.0
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 9.6e-173 610.9 518 60.6
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 1.1e-171 607.4 506 62.5
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 1.1e-171 607.4 490 63.3
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 1.1e-171 607.4 478 65.7
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 1.4e-171 607.1 506 62.6
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 3.1e-171 605.9 496 62.1
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 4.0e-171 605.5 506 62.1
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 5.3e-171 605.1 513 63.0
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 6.9e-171 604.7 544 60.5
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 9.0e-171 604.4 486 63.8
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 1.5e-170 603.6 531 60.5
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 2.0e-170 603.2 555 57.5
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 3.4e-170 602.4 545 58.7
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 9.9e-170 600.9 499 63.5
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 1.3e-169 600.5 536 60.6
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 2.9e-169 599.4 546 58.8
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 3.8e-169 599.0 481 62.4
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 1.1e-168 597.4 483 63.4
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 1.9e-168 596.7 485 61.9
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 1.9e-168 596.7 487 63.9
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 9.3e-168 594.3 484 62.6
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 1.2e-167 594.0 501 61.7
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 1.6e-167 593.6 548 57.1
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 2.1e-167 593.2 522 59.2
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 2.7e-167 592.8 554 57.6
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 4.6e-167 592.0 548 58.6
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 6.0e-167 591.7 548 57.1
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 2.3e-166 589.7 507 60.6
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 2.5e-165 586.3 538 58.6
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 3.3e-165 585.9 487 62.2
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 5.6e-165 585.1 536 59.0
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 5.6e-165 585.1 525 57.9
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 1.6e-164 583.6 545 56.0
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 2.8e-164 582.8 583 54.7
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 1.4e-163 580.5 554 57.2
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 1.8e-163 580.1 552 56.3
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 4.0e-163 578.9 484 61.8
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 5.3e-163 578.6 484 61.6
Duzib168G1467 Durio zibethinus HOM05D004385 ORTHO05D005245 6.9e-163 578.2 472 63.6
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 2.6e-162 576.2 522 57.7
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 3.4e-162 575.9 491 60.3
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 4.5e-162 575.5 521 59.3
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 9.9e-162 574.3 521 56.2
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 8.4e-161 571.2 482 61.6
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 1.1e-160 570.9 488 61.5
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 1.9e-160 570.1 486 59.9
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 3.2e-160 569.3 485 61.0
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 2.7e-159 566.2 484 60.5
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 7.9e-159 564.7 548 56.9
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 2.3e-158 563.1 452 66.8
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 3.0e-158 562.8 555 56.8
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 5.1e-158 562.0 531 59.5
AUR62028006 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.1e-157 560.8 505 58.2
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 1.5e-157 560.5 485 61.0
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 1.3e-156 557.4 482 59.1
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 1.6e-156 557.0 482 60.8
AUR62020716 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.1e-155 554.3 500 59.0
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 1.1e-155 554.3 486 59.7
ECA240G4307 Erigeron canadensis HOM05D004385 ORTHO05D005245 1.8e-155 553.5 494 57.9
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 1.7e-153 547.0 464 60.6
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 1.1e-152 544.3 483 56.7
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 1.4e-152 543.9 486 58.0
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 1.2e-151 540.8 484 58.5
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 1.0e-150 537.7 485 57.9
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 1.8e-150 537.0 481 58.0
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 7.4e-149 531.6 490 57.1
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 9.6e-149 531.2 494 56.1
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 2.4e-147 526.6 551 50.6
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 6.9e-147 525.0 584 50.9
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.6e-146 523.1 488 56.4
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 7.6e-146 521.5 520 53.7
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 7.1e-144 515.0 496 58.3
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 2.3e-142 510.0 479 56.6
Potri.018G145600 Populus trichocarpa HOM05D004385 ORTHO05D005245 4.8e-140 502.3 419 63.0
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.1e-139 501.1 490 54.1
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 3.1e-139 499.6 489 53.2
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 5.9e-138 495.4 475 54.9
EL10Ac2g04866 Beta vulgaris HOM05D004385 ORTHO05D005245 2.9e-137 493.0 513 53.2
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 6.1e-135 485.3 484 54.5
CDE06G1948 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 1.5e-133 480.7 453 55.2
Ah.11g043620 Amaranthus hybridus HOM05D004385 ORTHO05D005245 2.0e-133 480.3 469 54.8
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 3.6e-127 459.5 506 48.4
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 2.3e-126 456.8 426 59.2
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 2.0e-125 453.8 537 47.3
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 7.4e-125 451.8 501 48.5
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 1.3e-124 451.1 503 50.9
Pp3c15_21680 Physcomitrium patens HOM05D004385 ORTHO05D005245 2.8e-124 449.9 515 47.4
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.2e-122 444.5 426 57.5
Sc06g0001470 Simmondsia chinensis HOM05D004385 ORTHO05D005245 7.2e-120 435.3 392 56.4
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 1.6e-119 434.1 495 52.3
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 1.8e-118 430.6 389 56.8
Cpa.g.sc123.31 Carica papaya HOM05D004385 ORTHO05D005245 1.7e-116 424.1 456 53.9
unitig_578.g16395 Utricularia gibba HOM05D004385 ORTHO05D005245 5.5e-112 409.1 329 66.3
Zm00001eb064440 Zea mays HOM05D004385 ORTHO05D005245 8.8e-110 401.7 394 50.5
CAN.G1581.3 Capsicum annuum HOM05D004385 ORTHO05D005245 1.5e-109 401.0 330 62.4
PGSC0003DMG400022081 Solanum tuberosum HOM05D004385 ORTHO05D005245 8.3e-108 395.2 451 48.6
PGSC0003DMG400021019 Solanum tuberosum HOM05D004385 ORTHO05D005245 3.1e-107 393.3 343 60.9
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 8.5e-105 385.2 641 37.6
Cfa020737 Carpinus fangiana HOM05D004385 ORTHO05D005245 4.7e-103 379.4 328 59.8
Haze_18802 Corylus avellana HOM05D004385 ORTHO05D005245 2.9e-97 360.1 394 52.8
Solyc07g016050.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 4.4e-93 346.3 342 51.2
Aqoxy2G04068 Aquilegia oxysepala HOM05D004385 ORTHO05D005245 1.7e-92 344.4 434 48.2
TPR.G34194 Trifolium pratense HOM05D004385 ORTHO05D005245 4.9e-92 342.8 322 56.5
FAN17G2530 Fragaria x ananassa HOM05D004385 ORTHO05D005245 7.8e-90 335.5 346 55.5
TAR626G1477 Trochodendron aralioides HOM05D004385 ORTHO05D005245 1.0e-89 335.1 291 60.1
Atru.chr9.1488 Acer truncatum HOM05D004385 ORTHO05D005245 5.0e-89 332.8 408 48.8
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 3.1e-86 323.6 258 63.6
CDE06G1657 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 2.1e-74 284.3 456 39.7
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 2.1e-71 274.2 238 55.0
Cre02.g105150 Chlamydomonas reinhardtii HOM05D004385 ORTHO05D005245 2.8e-71 273.9 607 32.9
Solyc07g016080.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 2.8e-71 273.9 276 50.0
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 1.5e-69 268.1 216 56.5
EL10Ac6g13794 Beta vulgaris HOM05D004385 ORTHO05D005245 5.4e-67 259.6 252 56.3
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 8.1e-63 245.7 469 36.7
Solyc07g016030.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.4e-62 245.0 349 41.0
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 8.9e-62 242.3 177 69.5
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 4.9e-60 236.5 131 86.3
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 6.6e-57 226.1 204 57.8
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 3.3e-56 223.8 204 57.4
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 5.6e-56 223.0 131 83.2
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 4.8e-55 219.9 149 73.8
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 2.0e-53 214.5 129 76.0
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 1.1e-51 208.8 168 63.1
AUR62020718 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.1e-46 192.2 195 47.7
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 5.3e-46 189.9 140 65.7
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 6.4e-44 183.0 146 61.6
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.1e-38 165.6 140 60.0
AUR62020720 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.2e-37 162.2 175 46.9
AUR62028003 Chenopodium quinoa HOM05D004385 ORTHO05D005245 7.6e-37 159.5 191 47.1
Sopen07g016630 Solanum pennellii HOM05D004385 ORTHO05D005245 3.8e-36 157.1 189 49.7
Solyc07g016040.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.2e-34 152.1 104 69.2
Solyc07g032590.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 3.3e-32 144.1 143 55.9
AUR62020721 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.6e-31 141.7 92 71.7
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 2.0e-29 134.8 82 75.6
PGSC0003DMG400007349 Solanum tuberosum HOM05D004385 ORTHO05D005245 1.2e-21 109.0 76 65.8
AUR62027998 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.0e-16 91.7 84 46.4
GSVIVG01026776001 Vitis vinifera HOM05D004385 ORTHO05D005245 1.7e-12 78.6 84 45.2
Medtr4g117010 Medicago truncatula HOM05D004385 ORTHO05D005245 3.9e-09 67.4 74 50.0
Medtr5g096240 Medicago truncatula HOM05D004385 ORTHO05D005245 8.8e-09 66.2 74 48.6
Oeu000968.1 Olea europaea HOM05D004385 ORTHO05D005245 2.6e-08 64.7 53 64.2


User provided reference genes

Program Settings