Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 5.4e-139 497.7 253 100.0
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.2e-114 416.8 246 83.3
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 3.0e-113 412.1 253 81.8
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 2.4e-107 392.5 237 83.5
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.8e-105 386.3 253 76.3
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 4.3e-104 381.7 253 75.5
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 1.8e-102 376.3 253 74.3
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 6.9e-102 374.4 253 73.5
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 6.9e-102 374.4 253 73.9
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 1.7e-100 369.8 262 72.5
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 1.7e-100 369.8 262 72.5
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 6.5e-100 367.9 254 74.4
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.0e-97 360.5 236 76.7
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 3.9e-97 358.6 247 72.9
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 3.9e-97 358.6 244 72.5
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 8.7e-97 357.5 239 75.3
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.3e-96 355.5 252 71.8
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 4.3e-96 355.1 244 71.7
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 4.3e-96 355.1 247 72.5
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 2.8e-95 352.4 236 75.0
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 1.8e-94 349.7 245 71.8
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 4.1e-94 348.6 234 75.6
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 5.3e-94 348.2 243 72.4
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 1.5e-93 346.7 237 73.0
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 2.6e-93 345.9 242 71.1
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 2.6e-93 345.9 237 72.6
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 2.2e-92 342.8 249 67.1
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 2.2e-92 342.8 249 67.1
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 6.5e-92 341.3 247 70.0
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 3.2e-91 339.0 249 66.7
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 7.2e-91 337.8 249 68.3
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 9.3e-91 337.4 249 67.9
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 1.6e-90 336.7 251 68.9
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 2.1e-90 336.3 249 67.5
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 3.6e-90 335.5 252 67.5
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 4.6e-90 335.1 247 68.0
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 1.3e-89 333.6 246 68.7
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 1.8e-89 333.2 252 67.5
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 3.9e-89 332.0 249 66.7
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 5.1e-89 331.6 245 68.2
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 6.7e-89 331.3 258 66.3
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 8.7e-89 330.9 246 67.1
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.5e-88 330.1 249 67.1
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 1.5e-88 330.1 245 66.5
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 1.9e-88 329.7 253 65.2
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 1.9e-88 329.7 250 68.8
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 3.3e-88 328.9 250 66.4
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 2.2e-87 326.2 247 67.6
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 2.2e-87 326.2 247 67.6
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 2.2e-87 326.2 253 64.8
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 2.8e-87 325.9 247 65.6
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 3.7e-87 325.5 249 65.9
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 1.4e-86 323.6 252 65.1
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 1.8e-86 323.2 235 68.5
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 2.4e-86 322.8 250 64.8
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 6.9e-86 321.2 249 64.7
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 9.1e-86 320.9 240 67.1
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 2.6e-85 319.3 237 67.9
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 7.7e-85 317.8 242 65.3
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 7.7e-85 317.8 254 64.2
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 7.7e-85 317.8 238 66.8
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 1.7e-84 316.6 249 65.1
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 1.7e-84 316.6 249 64.7
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 2.9e-84 315.8 287 59.2
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 6.5e-84 314.7 249 64.7
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 6.5e-84 314.7 241 66.4
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 8.5e-84 314.3 240 67.1
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 1.1e-83 313.9 249 64.7
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 1.1e-83 313.9 248 64.1
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 1.4e-83 313.5 254 62.6
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 1.9e-83 313.2 253 63.2
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.5e-83 312.8 249 67.1
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 2.5e-83 312.8 251 65.7
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 3.2e-83 312.4 254 62.2
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 4.2e-83 312.0 249 63.9
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 7.2e-83 311.2 249 63.9
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 7.2e-83 311.2 249 63.9
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 2.1e-82 309.7 249 63.5
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 2.1e-82 309.7 249 63.5
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 2.1e-82 309.7 257 61.9
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 3.6e-82 308.9 249 63.1
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 4.6e-82 308.5 249 63.1
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 4.6e-82 308.5 249 63.5
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 6.1e-82 308.1 243 63.0
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 6.1e-82 308.1 243 63.0
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 6.1e-82 308.1 249 63.5
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 6.1e-82 308.1 249 63.1
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.0e-81 307.4 249 62.7
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.0e-81 307.4 249 62.7
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 6.7e-81 304.7 196 77.6
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 4.4e-80 302.0 197 74.1
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 5.7e-80 301.6 235 65.1
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 9.7e-80 300.8 231 67.5
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 8.2e-79 297.7 238 64.3
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 5.3e-78 295.0 319 52.7
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 6.9e-78 294.7 239 64.4
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 7.7e-77 291.2 249 59.0
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 1.0e-76 290.8 218 66.1
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 3.6e-74 282.3 247 61.5
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.9e-73 278.9 246 60.2
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 4.4e-72 275.4 232 60.8
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 2.8e-71 272.7 243 61.7
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.8e-71 272.7 247 60.3
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 3.7e-71 272.3 207 68.6
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.8e-71 271.9 250 59.2
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 7.0e-70 268.1 235 61.7
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 1.1e-67 260.8 163 79.1
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 1.9e-67 260.0 246 57.3
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 7.2e-67 258.1 240 54.6
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 2.3e-65 253.1 236 55.5
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 1.7e-63 246.9 258 53.1
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 2.2e-63 246.5 185 67.0
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 5.0e-60 235.3 228 52.6
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.5e-59 233.0 182 68.1
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 4.5e-53 212.2 175 58.9
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 5.0e-52 208.8 214 52.3
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 4.7e-50 202.2 137 74.5
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 1.8e-49 200.3 225 44.4
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 2.6e-48 196.4 189 56.6
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 4.1e-46 189.1 132 71.2
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 1.4e-38 164.1 131 61.8
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 1.6e-34 150.6 203 40.4
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 1.2e-29 134.4 225 35.1
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 4.1e-22 109.4 87 64.4
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.7e-21 106.7 82 63.4
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 6.0e-21 105.5 79 67.1
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 3.9e-20 102.8 79 63.3
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 3.9e-20 102.8 79 63.3
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 2.2e-15 87.0 60 66.7
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 7.1e-14 82.0 62 71.0
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 1.2e-08 64.7 47 63.8
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 3.4e-08 63.2 46 63.0
SGA_v2.0_scaffold38G15103 Striga asiatica HOM05D002209 ORTHO05D401863 4.9e-07 59.3 41 70.7


User provided reference genes

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