Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 1.6e-206 722.6 391 100.0
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 9.9e-124 447.6 362 70.2
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 7.6e-108 394.8 365 60.3
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 6.9e-101 371.7 361 57.6
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 2.6e-100 369.8 373 56.6
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 2.1e-81 307.0 469 45.6
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 7.7e-76 288.5 350 48.3
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 1.0e-75 288.1 366 48.9
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 3.0e-72 276.6 372 47.6
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 6.7e-72 275.4 366 47.0
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 8.8e-72 275.0 368 49.5
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 1.1e-71 274.6 354 45.2
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 6.3e-70 268.9 371 45.3
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.1e-69 268.1 357 45.4
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 2.4e-69 266.9 359 44.6
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 3.1e-69 266.5 369 45.0
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 5.3e-69 265.8 362 46.1
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 7.0e-69 265.4 358 45.5
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 2.2e-67 260.4 372 43.8
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.9e-67 260.0 369 45.3
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 5.0e-67 259.2 367 44.7
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 6.5e-67 258.8 357 43.7
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 8.5e-67 258.5 351 44.7
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.9e-66 257.3 365 43.0
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.9e-66 257.3 367 43.3
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 2.5e-66 256.9 376 44.1
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.6e-65 254.2 375 44.5
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 2.1e-65 253.8 352 43.2
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 2.3e-64 250.4 356 44.1
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 5.2e-64 249.2 355 43.7
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 4.4e-63 246.1 355 44.8
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 7.5e-63 245.4 354 43.5
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 9.8e-63 245.0 366 41.5
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 1.7e-62 244.2 359 43.5
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.2e-62 243.8 386 40.4
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 1.4e-61 241.1 358 43.6
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 2.4e-61 240.4 412 40.8
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.1e-61 239.6 392 40.6
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 5.9e-60 235.7 361 40.2
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 1.3e-59 234.6 359 42.3
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 2.2e-59 233.8 360 40.3
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 3.8e-59 233.0 351 41.9
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 8.5e-59 231.9 365 40.3
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 8.5e-59 231.9 349 42.4
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.5e-58 230.3 398 38.7
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 9.5e-58 228.4 355 40.8
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.0e-56 224.9 352 41.5
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 2.3e-56 223.8 354 40.4
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 4.0e-56 223.0 355 41.4
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 5.2e-56 222.6 353 39.9
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 6.8e-56 222.2 352 42.6
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 2.0e-55 220.7 295 44.7
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 2.6e-55 220.3 355 41.1
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 3.4e-55 219.9 368 39.1
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 1.7e-54 217.6 358 38.8
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 2.8e-54 216.9 379 42.0
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 8.3e-54 215.3 323 44.0
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 8.3e-54 215.3 360 41.9
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.8e-53 214.2 354 39.8
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 2.4e-53 213.8 351 38.7
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 3.1e-53 213.4 358 40.5
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 5.4e-53 212.6 351 39.0
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 9.2e-53 211.8 351 39.3
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 9.2e-53 211.8 347 37.2
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 1.2e-52 211.5 351 39.0
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 2.0e-52 210.7 367 37.3
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.0e-52 210.7 296 44.6
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 2.7e-52 210.3 353 39.7
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 3.5e-52 209.9 368 37.5
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 5.9e-52 209.1 348 38.5
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 5.9e-52 209.1 346 40.5
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 2.3e-51 207.2 360 40.0
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 2.9e-51 206.8 351 37.0
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 5.0e-51 206.1 342 41.5
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 6.6e-51 205.7 353 37.4
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 1.5e-50 204.5 351 39.0
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 4.3e-50 203.0 356 37.6
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 5.6e-50 202.6 351 38.2
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 5.6e-50 202.6 286 43.0
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 1.2e-49 201.4 371 36.9
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 1.2e-49 201.4 353 39.4
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 3.6e-49 199.9 353 37.7
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 6.1e-49 199.1 351 37.9
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 5.2e-48 196.1 352 36.4
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 2.0e-47 194.1 399 36.3
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 2.0e-47 194.1 345 37.4
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 4.9e-46 189.5 275 42.9
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 4.6e-44 183.0 346 35.5
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 4.6e-44 183.0 398 36.9
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 6.6e-43 179.1 348 36.8
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 8.6e-43 178.7 361 35.7
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 1.1e-42 178.3 339 38.3
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 1.5e-42 177.9 358 38.8
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 3.3e-42 176.8 372 30.9
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 6.2e-41 172.6 201 50.7
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.4e-40 171.4 338 35.5
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 3.1e-40 170.2 201 46.3
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 4.0e-40 169.9 347 35.7
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 8.9e-40 168.7 307 35.5
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 7.5e-39 165.6 285 39.6
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 7.5e-39 165.6 357 34.7
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 9.8e-39 165.2 364 33.0
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 2.9e-38 163.7 339 35.1
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 5.4e-37 159.5 351 34.2
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 5.4e-37 159.5 283 38.9
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 1.6e-36 157.9 362 34.5
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 6.0e-36 156.0 261 39.1
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 3.9e-35 153.3 303 36.3
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 8.6e-35 152.1 228 44.7
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 1.1e-34 151.8 222 41.4
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 5.6e-34 149.4 288 36.5
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 9.5e-34 148.7 207 44.4
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 2.1e-33 147.5 299 37.1
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.1e-32 145.2 209 45.9
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.6e-28 131.3 253 36.0
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.2e-25 121.7 290 29.0
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 1.8e-24 117.9 196 39.8
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 6.4e-22 109.4 138 43.5
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 4.6e-20 103.2 400 27.2
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.0e-19 102.1 122 47.5
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 2.5e-18 97.4 118 45.8
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 4.3e-18 96.7 152 41.4
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 1.2e-17 95.1 100 51.0
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 1.2e-15 88.6 163 39.3
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 1.2e-15 88.6 243 30.5
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 1.2e-15 88.6 243 30.5
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 1.2e-15 88.6 243 30.5
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 1.2e-15 88.6 243 30.5
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 4.9e-14 83.2 200 32.0
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 6.4e-14 82.8 102 45.1
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 6.4e-14 82.8 392 24.2
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 3.9e-11 73.6 199 30.2
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 2.5e-10 70.9 238 25.2
SEGI_30577 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 9.0e-08 62.4 122 32.0
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.3e-06 58.5 76 46.1
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 4.9e-06 56.6 39 69.2


User provided reference genes

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