Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.5e-147 526.2 276 100.0
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.4e-55 220.7 129 91.5
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 3.4e-54 216.1 129 89.9
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 7.6e-54 214.9 128 86.7
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.1e-52 211.1 128 84.4
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.1e-52 211.1 128 85.2
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.5e-52 209.9 129 84.5
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 5.5e-52 208.8 128 84.4
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 9.3e-52 208.0 128 83.6
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.2e-51 207.6 126 84.9
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.2e-51 207.6 126 84.9
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.6e-51 207.2 128 83.6
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.6e-51 207.2 152 74.3
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.6e-51 207.2 128 83.6
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.1e-51 206.8 129 83.7
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 2.1e-51 206.8 129 82.9
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 2.7e-51 206.5 127 83.5
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 4.6e-51 205.7 129 82.2
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 4.6e-51 205.7 128 82.8
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 6.0e-51 205.3 128 83.6
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.0e-50 204.5 128 82.0
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.8e-50 203.8 129 82.2
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.8e-50 203.8 129 82.2
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.8e-50 203.8 128 81.2
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.8e-50 203.8 128 81.2
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.3e-50 203.4 128 82.0
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 3.0e-50 203.0 129 80.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 3.9e-50 202.6 129 82.2
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 5.1e-50 202.2 128 82.0
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 5.1e-50 202.2 129 82.2
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 5.1e-50 202.2 128 80.5
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.1e-49 201.1 128 82.0
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.5e-49 200.7 129 80.6
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.5e-49 200.7 129 80.6
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.9e-49 200.3 128 79.7
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 1.9e-49 200.3 128 79.7
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 2.5e-49 199.9 129 80.6
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 2.5e-49 199.9 129 80.6
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 4.3e-49 199.1 128 79.7
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 7.4e-49 198.4 128 79.7
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.6e-48 197.2 128 79.7
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 1.6e-48 197.2 128 78.9
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 2.2e-48 196.8 126 78.6
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 2.2e-48 196.8 128 80.5
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 2.2e-48 196.8 126 81.0
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 3.7e-48 196.1 128 79.7
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 4.8e-48 195.7 119 84.9
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 6.3e-48 195.3 129 77.5
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 6.3e-48 195.3 128 78.9
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 8.2e-48 194.9 135 77.8
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.1e-47 194.5 128 78.1
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.4e-47 194.1 131 78.6
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 1.8e-47 193.7 128 77.3
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.8e-47 193.7 128 78.1
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.4e-47 193.4 122 81.1
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.4e-47 193.4 128 75.8
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 3.1e-47 193.0 127 78.0
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 3.1e-47 193.0 128 81.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 4.1e-47 192.6 128 76.6
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 4.1e-47 192.6 129 75.2
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.3e-47 192.2 128 76.6
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 9.0e-47 191.4 128 79.7
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 9.0e-47 191.4 129 74.4
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 9.0e-47 191.4 128 75.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.2e-46 191.0 128 75.8
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 1.2e-46 191.0 128 75.8
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 2.0e-46 190.3 128 75.8
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.0e-46 190.3 127 74.8
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.6e-46 189.9 128 75.8
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 3.4e-46 189.5 113 86.7
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 4.5e-46 189.1 128 75.0
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 5.9e-46 188.7 128 71.9
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 7.7e-46 188.3 129 75.2
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.0e-45 188.0 125 76.0
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.3e-45 187.6 129 72.9
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.2e-45 186.8 127 73.2
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.2e-45 186.8 121 81.0
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 2.9e-45 186.4 137 73.0
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 1.1e-44 184.5 128 74.2
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.1e-44 184.5 129 78.3
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 4.2e-44 182.6 129 76.7
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.5e-44 182.2 128 73.4
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 7.2e-44 181.8 129 76.0
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 7.2e-44 181.8 129 76.0
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.7e-43 179.9 121 75.2
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 3.6e-43 179.5 119 79.0
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 4.6e-43 179.1 128 72.7
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 7.9e-43 178.3 129 75.2
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 7.9e-43 178.3 130 72.3
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 6.7e-42 175.3 120 79.2
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 8.8e-42 174.9 172 59.3
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.1e-41 174.5 129 74.4
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.3e-40 171.0 104 84.6
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 8.2e-40 168.3 125 73.6
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.0e-37 161.4 186 54.3
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 5.5e-36 155.6 104 75.0
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.2e-35 154.5 104 76.9
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.2e-35 154.5 99 78.8
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.1e-35 153.7 128 60.9
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 4.7e-35 152.5 128 60.9
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 7.9e-35 151.8 116 69.8
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.3e-33 146.4 96 78.1
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 5.3e-31 139.0 101 73.3
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 3.5e-30 136.3 92 77.2
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 8.5e-29 131.7 92 76.1
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 2.5e-28 130.2 94 75.5
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 1.6e-27 127.5 120 55.8
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 1.1e-25 121.3 92 72.8
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 4.4e-25 119.4 110 64.5
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 5.7e-25 119.0 93 71.0
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.8e-24 116.7 72 81.9
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 3.1e-23 113.2 99 52.5
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.0e-21 105.9 66 80.3
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 4.2e-20 102.8 62 83.9
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 4.2e-20 102.8 62 83.9
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 6.1e-19 99.0 63 73.0
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 1.0e-18 98.2 62 82.3
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 5.2e-18 95.9 65 75.4
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 4.4e-17 92.8 64 71.9
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.1e-15 88.2 55 83.6
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 3.1e-15 86.7 65 66.2
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 4.2e-12 76.3 114 34.2
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 1.8e-10 70.9 115 36.5
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 1.7e-08 64.3 41 75.6
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.7e-08 64.3 38 81.6
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 2.2e-08 63.9 61 50.8
SGA_v2.0_scaffold89G27576 Striga asiatica HOM05D037070 ORTHO05D007669 2.7e-06 57.0 101 40.6


User provided reference genes

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