Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09582 Striga asiatica HOM05D010925 ORTHO05D012909 1.1e-102 376.7 198 100.0
Lsat_1_v5_gn_8_69640 Lactuca sativa HOM05D010925 ORTHO05D012909 9.7e-27 124.4 209 40.7
SGA_v2.0_scaffold280G46842 Striga asiatica HOM05D020790 ORTHO05D025792 2.5e-14 83.2 173 38.2
SGA_v2.0_scaffold191G40456 Striga asiatica HOM05D032302 ORTHO05D012909 3.2e-14 82.8 149 42.3
MBI01_g34913_MAGBIO Magnolia biondii HOM05D010925 ORTHO05D015675 2.1e-13 80.1 187 35.8
Atru.chr4.2406 Acer truncatum HOM05D010925 ORTHO05D012909 6.1e-13 78.6 90 52.2
Thecc.08G016600 Theobroma cacao HOM05D010925 ORTHO05D012909 8.0e-13 78.2 89 50.6
Os06g0704450 Oryza sativa ssp. japonica HOM05D019932 ORTHO05D015675 1.5e-11 73.9 97 50.5
SGA_v2.0_scaffold318G48503 Striga asiatica HOM05D010925 ORTHO05D012909 1.5e-11 73.9 68 61.8
FAN26G3287 Fragaria x ananassa HOM05D030981 ORTHO05D015675 1.3e-10 70.9 200 32.0
Os01g0180050 Oryza sativa ssp. japonica HOM05D019932 ORTHO05D015675 1.7e-10 70.5 89 51.7
Zm00001eb050900 Zea mays HOM05D019932 ORTHO05D015675 3.7e-10 69.3 96 47.9
Thecc.02G093800 Theobroma cacao HOM05D010925 ORTHO05D012909 7.0e-09 65.1 87 46.0
Glyma.07G088350 Glycine max HOM05D010925 ORTHO05D012909 2.0e-08 63.5 62 58.1
Gohir.A12G026901 Gossypium hirsutum HOM05D010925 ORTHO05D012909 4.5e-08 62.4 87 44.8
MBI11_g07538_MAGBIO Magnolia biondii HOM05D062581 ORTHO05D015675 1.0e-07 61.2 70 48.6
MBI11_g36342_MAGBIO Magnolia biondii HOM05D062581 ORTHO05D015675 1.0e-07 61.2 70 48.6
FAN23G0914 Fragaria x ananassa HOM05D030981 ORTHO05D015675 6.6e-07 58.5 93 39.8
FAN26G1068 Fragaria x ananassa HOM05D030981 ORTHO05D015675 1.1e-06 57.8 101 38.6
Glyma.07G164350 Glycine max HOM05D010925 ORTHO05D012909 2.5e-06 56.6 71 49.3


User provided reference genes

Program Settings