Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 7.2e-101 370.5 183 100.0
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 6.6e-38 161.4 183 51.9
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 2.3e-30 136.3 199 44.7
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 5.1e-30 135.2 205 43.9
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 4.3e-29 132.1 189 45.0
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 9.6e-29 131.0 185 45.4
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 2.8e-28 129.4 189 45.0
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 8.1e-28 127.9 204 43.6
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 3.4e-26 122.5 199 41.7
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 7.6e-26 121.3 195 43.6
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.3e-25 120.6 197 40.6
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 5.5e-24 115.2 184 41.8
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 9.3e-24 114.4 206 39.3
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 2.1e-23 113.2 191 41.9
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 2.7e-23 112.8 192 40.6
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 4.6e-23 112.1 187 40.6
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 7.9e-23 111.3 192 39.1
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 5.1e-22 108.6 197 36.5
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.5e-21 107.1 191 38.2
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.5e-21 107.1 200 38.5
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 2.5e-21 106.3 188 41.0
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.5e-21 106.3 190 38.4
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 2.5e-21 106.3 177 39.0
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.3e-21 105.9 204 39.2
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 3.3e-21 105.9 197 38.6
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.3e-20 104.0 178 38.2
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 1.6e-20 103.6 178 39.3
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 2.8e-20 102.8 187 38.5
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 2.8e-20 102.8 187 38.5
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.7e-20 102.4 232 35.3
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 4.8e-20 102.1 206 36.4
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 6.2e-20 101.7 191 38.2
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 6.2e-20 101.7 180 36.7
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 6.2e-20 101.7 193 37.3
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 8.2e-20 101.3 197 36.5
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 8.2e-20 101.3 192 38.5
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.1e-19 100.9 179 39.7
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 1.1e-19 100.9 202 33.7
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 1.4e-19 100.5 190 39.5
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 1.4e-19 100.5 191 37.2
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 1.4e-19 100.5 191 37.2
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 1.4e-19 100.5 190 39.5
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.8e-19 100.1 181 38.1
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.4e-19 99.8 180 37.2
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 3.1e-19 99.4 193 37.8
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 4.0e-19 99.0 202 32.7
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 5.3e-19 98.6 181 39.8
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 6.9e-19 98.2 184 36.4
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 6.9e-19 98.2 205 36.1
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 6.9e-19 98.2 177 37.9
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.2e-18 97.4 190 37.4
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 2.0e-18 96.7 190 37.9
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 2.0e-18 96.7 190 37.9
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.6e-18 96.3 192 34.4
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.6e-18 96.3 183 36.1
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.4e-18 95.9 184 37.5
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 3.4e-18 95.9 183 36.1
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 3.4e-18 95.9 188 37.8
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.5e-18 95.5 188 34.6
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 4.5e-18 95.5 185 36.2
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 4.5e-18 95.5 191 38.2
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 7.6e-18 94.7 178 37.6
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.0e-17 94.4 190 37.4
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.0e-17 94.4 230 34.3
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 1.0e-17 94.4 201 34.8
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.3e-17 94.0 182 37.9
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.2e-17 93.2 188 34.0
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 2.9e-17 92.8 200 36.0
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.9e-17 92.8 191 37.7
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.8e-17 92.4 194 38.1
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 3.8e-17 92.4 189 36.0
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 4.9e-17 92.0 194 34.5
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 6.5e-17 91.7 197 35.0
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 6.5e-17 91.7 185 36.2
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 8.4e-17 91.3 183 36.1
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 8.4e-17 91.3 206 34.5
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 8.4e-17 91.3 195 37.4
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 8.4e-17 91.3 180 34.4
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 1.4e-16 90.5 198 34.8
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 1.9e-16 90.1 189 33.9
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 2.5e-16 89.7 189 34.4
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 2.5e-16 89.7 189 34.4
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 3.2e-16 89.4 189 33.9
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.2e-16 89.0 181 33.1
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 5.5e-16 88.6 218 32.1
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 9.3e-16 87.8 209 30.6
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.2e-15 87.4 203 32.0
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.7e-15 86.3 187 33.7
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 2.7e-15 86.3 212 32.1
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 3.5e-15 85.9 180 35.6
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.6e-15 85.5 196 33.7
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 4.6e-15 85.5 187 33.7
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 6.0e-15 85.1 179 33.5
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 6.0e-15 85.1 196 33.7
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.3e-14 84.0 214 33.6
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 2.3e-14 83.2 207 32.9
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 3.0e-14 82.8 92 50.0
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 3.9e-14 82.4 167 36.5
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 5.1e-14 82.0 201 30.8
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 8.7e-14 81.3 197 32.5
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.1e-13 80.9 210 31.4
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 1.5e-13 80.5 174 37.4
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 1.5e-13 80.5 171 34.5
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 2.5e-13 79.7 183 33.3
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 3.3e-13 79.3 172 34.3
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 5.7e-13 78.6 188 36.2
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 5.7e-13 78.6 183 33.3
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 1.3e-12 77.4 202 34.2
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.2e-12 76.6 167 34.1
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 2.8e-12 76.3 216 29.6
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 4.8e-12 75.5 177 29.9
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 6.3e-12 75.1 189 30.2
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 2.4e-11 73.2 169 36.1
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 2.4e-11 73.2 180 33.9
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 5.3e-11 72.0 174 29.9
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.5e-10 70.5 187 31.0
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 5.9e-10 68.6 166 36.7
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 1.0e-09 67.8 180 35.0
Zm00001eb313970 Zea mays HOM05D041184 ORTHO05D037194 1.9e-08 63.5 209 32.1
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 2.5e-08 63.2 205 31.2
MBI19_g18108_MAGBIO Magnolia biondii HOM05D005897 ORTHO05D007128 1.0e-06 57.8 210 29.0
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 2.3e-06 56.6 174 36.2
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 5.1e-06 55.5 86 38.4
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 8.8e-06 54.7 188 28.2


User provided reference genes

Program Settings