Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09498 Striga asiatica HOM05D008620 ORTHO05D011304 1.8e-254 882.1 440 100.0
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 2.3e-36 157.5 490 33.9
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 3.6e-29 133.7 157 52.2
Zm00001eb237130 Zea mays HOM05D008620 ORTHO05D011304 1.4e-20 105.1 135 50.4
MBI19_g32860_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 9.7e-19 99.0 157 43.3
MBI12_g22442_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 2.8e-18 97.4 124 53.2
FAN14G3868 Fragaria x ananassa HOM05D008620 ORTHO05D011304 1.2e-16 92.0 261 33.3
FAN26G1174 Fragaria x ananassa HOM05D008620 ORTHO05D025601 1.0e-15 89.0 71 66.2
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 3.0e-12 77.4 72 56.9
FAN19G0360 Fragaria x ananassa HOM05D008620 ORTHO05D011304 8.8e-12 75.9 73 60.3
FAN28G0556 Fragaria x ananassa HOM05D008620 ORTHO05D011304 8.8e-12 75.9 73 60.3
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 3.4e-11 73.9 72 55.6
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 1.7e-10 71.6 66 59.1
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 2.8e-10 70.9 66 59.1
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 1.4e-09 68.6 109 44.0
SGA_v2.0_scaffold14G06926 Striga asiatica HOM05D008620 ORTHO05D401327 2.4e-09 67.8 149 34.2
Os03g0143150 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D017975 4.1e-09 67.0 94 41.5
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 7.0e-09 66.2 59 61.0
FAN19G0678 Fragaria x ananassa HOM05D010876 ORTHO05D011353 9.1e-09 65.9 93 47.3
Zm00001eb325460 Zea mays HOM05D008620 ORTHO05D017975 2.7e-08 64.3 324 28.1
MBI13_g43924_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 5.9e-08 63.2 145 39.3
MBI12_g36692_MAGBIO Magnolia biondii HOM05D010876 ORTHO05D011353 7.7e-08 62.8 92 45.7
MBI13_g43923_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 5.0e-07 60.1 88 46.6
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 6.5e-07 59.7 77 50.6
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 6.5e-07 59.7 50 64.0
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 8.5e-07 59.3 76 51.3
Os02g0269400 Oryza sativa ssp. japonica HOM05D022356 ORTHO05D011353 1.9e-06 58.2 86 45.3


User provided reference genes

Program Settings