Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09495 Striga asiatica HOM05D000093 ORTHO05D405706 1.8e-176 622.5 307 100.0
SGA_v2.0_scaffold58G20308 Striga asiatica HOM05D000093 ORTHO05D403508 1.2e-26 124.8 130 57.7
Gohir.D13G083600 Gossypium hirsutum HOM05D000093 ORTHO05D002784 8.0e-12 75.5 90 50.0
Thecc.02G327000 Theobroma cacao HOM05D000093 ORTHO05D002784 8.0e-12 75.5 90 48.9
Ciclev10031449m.g Citrus clementina HOM05D000093 ORTHO05D002784 1.4e-11 74.7 114 40.4
Dinv20149 Davidia involucrata HOM05D000093 ORTHO05D002784 2.3e-11 73.9 88 47.7
Duzib251G0244 Durio zibethinus HOM05D000093 ORTHO05D002784 3.1e-11 73.6 90 47.8
Gohir.A13G084100 Gossypium hirsutum HOM05D000093 ORTHO05D002784 5.2e-11 72.8 90 48.9
Gorai.013G095400 Gossypium raimondii HOM05D000093 ORTHO05D002784 5.2e-11 72.8 90 48.9
MELO3C019193.2 Cucumis melo HOM05D000093 ORTHO05D002784 6.8e-11 72.4 88 50.0
Prupe.3G250000 Prunus persica HOM05D000093 ORTHO05D002784 1.2e-10 71.6 114 39.5
vmacro10439 Vaccinium macrocarpon HOM05D000093 ORTHO05D002784 1.2e-10 71.6 90 47.8
Actinidia13397 Actinidia chinensis HOM05D000093 ORTHO05D002784 2.0e-10 70.9 90 46.7
Rhsim09G0125800 Rhododendron simsii HOM05D000093 ORTHO05D002784 2.0e-10 70.9 87 46.0
Actinidia16150 Actinidia chinensis HOM05D000093 ORTHO05D002784 2.6e-10 70.5 88 45.5
Actinidia26535 Actinidia chinensis HOM05D000093 ORTHO05D002784 2.6e-10 70.5 88 45.5
Dinv34047 Davidia involucrata HOM05D000093 ORTHO05D002784 2.6e-10 70.5 88 46.6
SalBow8G3033 Salvia bowleyana HOM05D000093 ORTHO05D002784 2.6e-10 70.5 89 46.1
Sed0013203 Sechium edule HOM05D000093 ORTHO05D002784 3.4e-10 70.1 127 37.0
COL.COLO4_27852 Corchorus olitorius HOM05D000093 ORTHO05D002784 5.8e-10 69.3 90 45.6
Medtr6g015910 Medicago truncatula HOM05D000093 ORTHO05D002784 9.8e-10 68.6 114 38.6
GSVIVG01012240001 Vitis vinifera HOM05D000093 ORTHO05D002784 9.8e-10 68.6 90 45.6
Lj3A1029T41 Lonicera japonica HOM05D000093 ORTHO05D002784 1.3e-09 68.2 88 44.3
Manes.05G112400 Manihot esculenta HOM05D000093 ORTHO05D002784 1.3e-09 68.2 114 39.5
MD17G1064800 Malus domestica HOM05D000093 ORTHO05D002784 1.7e-09 67.8 114 39.5
TAR374G0304 Trochodendron aralioides HOM05D000093 ORTHO05D002784 1.7e-09 67.8 115 37.4
Actinidia26266 Actinidia chinensis HOM05D000093 ORTHO05D002784 2.9e-09 67.0 114 36.0
TPR.G15944 Trifolium pratense HOM05D000093 ORTHO05D002784 2.9e-09 67.0 114 38.6
MELO3C022045.2 Cucumis melo HOM05D000093 ORTHO05D002784 3.7e-09 66.6 88 45.5
CsaV3_5G038650 Cucumis sativus L. HOM05D000093 ORTHO05D002784 3.7e-09 66.6 88 45.5
Manes.02G058500 Manihot esculenta HOM05D000093 ORTHO05D002784 3.7e-09 66.6 113 39.8
Glyma.13G052900 Glycine max HOM05D000093 ORTHO05D002784 4.9e-09 66.2 114 38.6
Glyma.19G033900 Glycine max HOM05D000093 ORTHO05D002784 4.9e-09 66.2 114 38.6
Psat1g036080 Pisum sativum HOM05D000093 ORTHO05D002784 4.9e-09 66.2 88 45.5
TAR629G1468 Trochodendron aralioides HOM05D000093 ORTHO05D002784 4.9e-09 66.2 114 38.6
arahy.Tifrunner.gnm1.ann1.JZF5VE Arachis hypogaea HOM05D000093 ORTHO05D002784 6.4e-09 65.9 105 40.0
CiPaw.03G084100 Carya illinoinensis HOM05D000093 ORTHO05D002784 6.4e-09 65.9 114 37.7
Ca_20765_v3 Cicer arietinum L. HOM05D000093 ORTHO05D002784 6.4e-09 65.9 113 37.2
Hma1.2p1_0566F.1_g179980 Hydrangea macrophylla HOM05D000093 ORTHO05D002784 6.4e-09 65.9 91 46.2
Lalb_Chr02g0158731 Lupinus albus HOM05D000093 ORTHO05D002784 6.4e-09 65.9 114 38.6
Phvul.004G041700 Phaseolus vulgaris HOM05D000093 ORTHO05D002784 6.4e-09 65.9 114 38.6
Sc11g0008770 Simmondsia chinensis HOM05D000093 ORTHO05D002784 6.4e-09 65.9 116 36.2
VMungo0464G2123 Vigna mungo HOM05D000093 ORTHO05D002784 6.4e-09 65.9 114 38.6
Thhalv10027742m.g Eutrema salsugineum HOM05D000093 ORTHO05D002784 8.3e-09 65.5 88 44.3
SGA_v2.0_scaffold60G21007 Striga asiatica HOM05D000574 ORTHO05D002645 8.3e-09 65.5 50 66.0
ClCG11G004920 Citrullus lanatus HOM05D000093 ORTHO05D002784 1.1e-08 65.1 88 45.5
Potri.010G156800 Populus trichocarpa HOM05D000093 ORTHO05D002784 1.1e-08 65.1 88 44.3
Potri.017G099000 Populus trichocarpa HOM05D000093 ORTHO05D002784 1.1e-08 65.1 114 37.7
Sabra04G0070800 Salix brachista HOM05D000093 ORTHO05D002784 1.9e-08 64.3 111 37.8
AL7G51450 Arabidopsis lyrata HOM05D000093 ORTHO05D002784 2.4e-08 63.9 114 36.8
arahy.Tifrunner.gnm1.ann1.31R89H Arachis hypogaea HOM05D000093 ORTHO05D002784 2.4e-08 63.9 105 39.0
Carub.0007s3688 Capsella rubella HOM05D000093 ORTHO05D002784 2.4e-08 63.9 144 35.4
Medtr3g007320 Medicago truncatula HOM05D000093 ORTHO05D002784 2.4e-08 63.9 114 36.8
BcaB06g27722 Brassica carinata HOM05D000093 ORTHO05D002784 3.2e-08 63.5 88 43.2
BcaC02g08866 Brassica carinata HOM05D000093 ORTHO05D002784 3.2e-08 63.5 88 43.2
A04p15450 Brassica napus HOM05D000093 ORTHO05D002784 3.2e-08 63.5 88 43.2
C04p49710 Brassica napus HOM05D000093 ORTHO05D002784 3.2e-08 63.5 88 43.2
BolC4t26560H Brassica oleracea HOM05D000093 ORTHO05D002784 3.2e-08 63.5 88 43.2
BraA04t17181Z Brassica rapa HOM05D000093 ORTHO05D002784 3.2e-08 63.5 88 43.2
Hma1.2p1_1502F.1_g287360 Hydrangea macrophylla HOM05D000093 ORTHO05D002784 3.2e-08 63.5 115 34.8
Hma1.2p1_2026F.1_g311600 Hydrangea macrophylla HOM05D000093 ORTHO05D002784 3.2e-08 63.5 115 34.8
MD09G1073300 Malus domestica HOM05D000093 ORTHO05D002784 3.2e-08 63.5 114 36.8
Manes.01G102800 Manihot esculenta HOM05D000093 ORTHO05D002784 3.2e-08 63.5 113 38.1
PSO017G1636 Papaver somniferum HOM05D000093 ORTHO05D002784 3.2e-08 63.5 88 43.2
RcHm_v2.0_Chr2g0165151 Rosa chinensis HOM05D000093 ORTHO05D002784 3.2e-08 63.5 114 38.6
Sabra17G0085500 Salix brachista HOM05D000093 ORTHO05D002784 3.2e-08 63.5 114 37.7
Atru.chr11.1597 Acer truncatum HOM05D000093 ORTHO05D002784 4.1e-08 63.2 89 42.7
CANSAT64G2154 Cannabis sativa HOM05D000093 ORTHO05D002784 4.1e-08 63.2 115 40.0
TAR371G1008 Trochodendron aralioides HOM05D000093 ORTHO05D002784 4.1e-08 63.2 114 37.7
Cfa007685 Carpinus fangiana HOM05D000093 ORTHO05D002784 5.4e-08 62.8 114 36.0
Ciclev10011662m.g Citrus clementina HOM05D000093 ORTHO05D002784 5.4e-08 62.8 116 36.2
Lalb_Chr06g0174841 Lupinus albus HOM05D000093 ORTHO05D002784 5.4e-08 62.8 114 36.0
Lalb_Chr10g0099011 Lupinus albus HOM05D000093 ORTHO05D002784 5.4e-08 62.8 87 42.5
Nn3g17504 Nelumbo nucifera HOM05D000093 ORTHO05D002784 5.4e-08 62.8 88 43.2
Psat1g034560 Pisum sativum HOM05D000093 ORTHO05D002784 5.4e-08 62.8 88 43.2
TWI60G0450 Tripterygium wilfordii HOM05D000093 ORTHO05D002784 5.4e-08 62.8 90 43.3
HPP92_001846 Vanilla planifolia HOM05D000093 ORTHO05D002784 5.4e-08 62.8 115 35.7
AT5G38970 Arabidopsis thaliana HOM05D000093 ORTHO05D002784 7.0e-08 62.4 114 36.0
Duzib138G0461 Durio zibethinus HOM05D000093 ORTHO05D002784 7.0e-08 62.4 114 36.0
Lj4C122T5 Lonicera japonica HOM05D000093 ORTHO05D002784 7.0e-08 62.4 115 34.8
THA.LOC104823884 Tarenaya hassleriana HOM05D000093 ORTHO05D002784 7.0e-08 62.4 114 36.0
PSO478G1409 Papaver somniferum HOM05D000093 ORTHO05D002784 9.2e-08 62.0 88 44.3
Sp7g02910 Schrenkiella parvula HOM05D000093 ORTHO05D002784 9.2e-08 62.0 114 36.0
TAR622G0479 Trochodendron aralioides HOM05D000093 ORTHO05D002784 9.2e-08 62.0 88 43.2
Cc00_g14180 Coffea canephora HOM05D000093 ORTHO05D002784 1.2e-07 61.6 115 37.4
Lj2g0025933 Lotus japonicus HOM05D000093 ORTHO05D002784 1.2e-07 61.6 114 36.0
QL03p073599 Quercus lobata HOM05D000093 ORTHO05D002784 1.2e-07 61.6 87 41.4
THA.LOC104822777 Tarenaya hassleriana HOM05D000093 ORTHO05D002784 1.2e-07 61.6 114 36.8
TWI31G1316 Tripterygium wilfordii HOM05D000093 ORTHO05D002784 1.2e-07 61.6 89 41.6
GSVIVG01036558001 Vitis vinifera HOM05D000093 ORTHO05D002784 1.2e-07 61.6 114 37.7
Cpa.g.sc1.155 Carica papaya HOM05D000093 ORTHO05D002784 1.6e-07 61.2 114 33.3
Gorai.001G208200 Gossypium raimondii HOM05D000093 ORTHO05D002784 1.6e-07 61.2 116 36.2
Aa31LG9G16780 Aethionema arabicum HOM05D000093 ORTHO05D002784 2.0e-07 60.8 88 40.9
THA.LOC104805522 Tarenaya hassleriana HOM05D000093 ORTHO05D002784 2.0e-07 60.8 113 36.3
Atru.chr8.549 Acer truncatum HOM05D000093 ORTHO05D002784 2.7e-07 60.5 116 35.3
CSS0004050 Camellia sinensis var. sinensis HOM05D000093 ORTHO05D002784 2.7e-07 60.5 114 36.0
CSS0014427 Camellia sinensis var. sinensis HOM05D000093 ORTHO05D002784 2.7e-07 60.5 114 36.0
Haze_14392 Corylus avellana HOM05D000093 ORTHO05D002784 2.7e-07 60.5 114 35.1
DCAR_025449 Daucus carota HOM05D000093 ORTHO05D002784 2.7e-07 60.5 116 33.6
Lalb_Chr10g0098951 Lupinus albus HOM05D000093 ORTHO05D002784 2.7e-07 60.5 93 40.9
MBI16_g31777_MAGBIO Magnolia biondii HOM05D000093 ORTHO05D002784 2.7e-07 60.5 90 41.1
Nn4g23495 Nelumbo nucifera HOM05D000093 ORTHO05D002784 2.7e-07 60.5 88 42.0
Psat1g066240 Pisum sativum HOM05D000093 ORTHO05D002784 2.7e-07 60.5 87 42.5
Thecc.04G104500 Theobroma cacao HOM05D000093 ORTHO05D002784 2.7e-07 60.5 114 36.0
Ca_20766_v3 Cicer arietinum L. HOM05D000093 ORTHO05D002784 3.5e-07 60.1 89 40.4
Duzib211G0271 Durio zibethinus HOM05D000093 ORTHO05D002784 3.5e-07 60.1 114 36.0
Nitab4.5_0001541g0080 Nicotiana tabacum HOM05D000093 ORTHO05D002784 3.5e-07 60.1 114 35.1
Cc11_g11780 Coffea canephora HOM05D000093 ORTHO05D002784 4.6e-07 59.7 89 43.8
Thhalv10004156m.g Eutrema salsugineum HOM05D000093 ORTHO05D002784 4.6e-07 59.7 88 42.0
Gohir.A07G180600 Gossypium hirsutum HOM05D000093 ORTHO05D002784 4.6e-07 59.7 90 41.1
CSS0009174 Camellia sinensis var. sinensis HOM05D000093 ORTHO05D002784 6.0e-07 59.3 88 40.9
CSS0027748 Camellia sinensis var. sinensis HOM05D000093 ORTHO05D002784 6.0e-07 59.3 88 40.9
Eucgr.I02054 Eucalyptus grandis HOM05D000093 ORTHO05D002784 6.0e-07 59.3 114 36.0
FAN02G0519 Fragaria x ananassa HOM05D000093 ORTHO05D002784 6.0e-07 59.3 114 36.8
Os03g0602300 Oryza sativa ssp. japonica HOM05D000093 ORTHO05D002784 6.0e-07 59.3 90 38.9
COL.COLO4_08396 Corchorus olitorius HOM05D000093 ORTHO05D002784 7.8e-07 58.9 90 41.1
Duzib133G1396 Durio zibethinus HOM05D000093 ORTHO05D002784 7.8e-07 58.9 115 33.9
Potri.004G117700 Populus trichocarpa HOM05D000093 ORTHO05D002784 7.8e-07 58.9 111 36.0
Rhsim08G0076200 Rhododendron simsii HOM05D000093 ORTHO05D002784 7.8e-07 58.9 113 34.5
arahy.Tifrunner.gnm1.ann1.2F8F1S Arachis hypogaea HOM05D000093 ORTHO05D002784 1.0e-06 58.5 114 35.1
CsaV3_4G028870 Cucumis sativus L. HOM05D000093 ORTHO05D002784 1.0e-06 58.5 77 48.1
Rhsim10G0055800 Rhododendron simsii HOM05D000093 ORTHO05D002784 1.0e-06 58.5 114 34.2
GSVIVG01012243001 Vitis vinifera HOM05D000093 ORTHO05D002784 1.0e-06 58.5 61 45.9
Actinidia18073 Actinidia chinensis HOM05D000093 ORTHO05D002784 1.3e-06 58.2 89 39.3
EL10Ac2g04449 Beta vulgaris HOM05D000093 ORTHO05D002784 1.3e-06 58.2 90 40.0
Cpa.g.sc14.209 Carica papaya HOM05D000093 ORTHO05D002784 1.3e-06 58.2 114 35.1
AUR62009490 Chenopodium quinoa HOM05D000093 ORTHO05D002784 1.3e-06 58.2 90 38.9
Lsat_1_v5_gn_3_96420 Lactuca sativa HOM05D000093 ORTHO05D002784 1.3e-06 58.2 89 39.3
QL02p066169 Quercus lobata HOM05D000093 ORTHO05D002784 1.3e-06 58.2 114 35.1
QL03p073609 Quercus lobata HOM05D000093 ORTHO05D002784 1.3e-06 58.2 35 68.6
TWI32G0979 Tripterygium wilfordii HOM05D000093 ORTHO05D002784 1.3e-06 58.2 88 42.0
CSS0028270 Camellia sinensis var. sinensis HOM05D000093 ORTHO05D002784 1.7e-06 57.8 88 40.9
FvH4_6g46500 Fragaria vesca HOM05D000093 ORTHO05D002784 1.7e-06 57.8 114 36.8
FAN14G5537 Fragaria x ananassa HOM05D000093 ORTHO05D002784 1.7e-06 57.8 114 36.8
Gohir.A07G079400 Gossypium hirsutum HOM05D000093 ORTHO05D002784 1.7e-06 57.8 116 35.3
Gohir.D07G084700 Gossypium hirsutum HOM05D000093 ORTHO05D002784 1.7e-06 57.8 116 35.3
Gohir.D07G187300 Gossypium hirsutum HOM05D000093 ORTHO05D002784 1.7e-06 57.8 116 35.3
Gorai.001G090300 Gossypium raimondii HOM05D000093 ORTHO05D002784 1.7e-06 57.8 116 35.3
Medtr7g016040 Medicago truncatula HOM05D000093 ORTHO05D002784 1.7e-06 57.8 114 35.1
Aa31LG2G3780 Aethionema arabicum HOM05D000093 ORTHO05D002784 2.3e-06 57.4 88 38.6
AL5G19860 Arabidopsis lyrata HOM05D000093 ORTHO05D002784 2.3e-06 57.4 88 39.8
AT3G30180 Arabidopsis thaliana HOM05D000093 ORTHO05D002784 2.3e-06 57.4 88 39.8
BcaC04g23829 Brassica carinata HOM05D000093 ORTHO05D002784 2.3e-06 57.4 88 39.8
C09p04370 Brassica napus HOM05D000093 ORTHO05D002784 2.3e-06 57.4 88 39.8
BolC9t53367H Brassica oleracea HOM05D000093 ORTHO05D002784 2.3e-06 57.4 88 39.8
Carub.0005s0840 Capsella rubella HOM05D000093 ORTHO05D002784 2.3e-06 57.4 88 39.8
AUR62023168 Chenopodium quinoa HOM05D000093 ORTHO05D002784 2.3e-06 57.4 90 37.8
ECA246G3249 Erigeron canadensis HOM05D000093 ORTHO05D002784 2.3e-06 57.4 89 38.2
FAN09G0427 Fragaria x ananassa HOM05D000093 ORTHO05D002784 2.3e-06 57.4 114 36.0
HanXRQChr17g0546501 Helianthus annuus HOM05D000093 ORTHO05D002784 2.3e-06 57.4 89 38.2
Sp2g18100 Schrenkiella parvula HOM05D000093 ORTHO05D002784 2.3e-06 57.4 88 39.8
Dinv34915 Davidia involucrata HOM05D000093 ORTHO05D002784 3.0e-06 57.0 89 38.2
Migut.E00042 Erythranthe guttata HOM05D000093 ORTHO05D002784 3.0e-06 57.0 90 38.9
Eucgr.J01402 Eucalyptus grandis HOM05D000093 ORTHO05D002784 3.0e-06 57.0 114 35.1
Eucgr.J01404 Eucalyptus grandis HOM05D000093 ORTHO05D002784 3.0e-06 57.0 114 35.1
Eucgr.J01407 Eucalyptus grandis HOM05D000093 ORTHO05D002784 3.0e-06 57.0 114 35.1
Eucgr.L03131 Eucalyptus grandis HOM05D000093 ORTHO05D002784 3.0e-06 57.0 114 35.1
Peaxi162Scf01197g00112 Petunia axillaris HOM05D000093 ORTHO05D002784 3.0e-06 57.0 89 39.3
ATR0827G030 Amborella trichopoda HOM05D000093 ORTHO05D002784 3.9e-06 56.6 89 37.1
BcaB04g19521 Brassica carinata HOM05D000093 ORTHO05D002784 3.9e-06 56.6 88 39.8
BraA09t36051Z Brassica rapa HOM05D000093 ORTHO05D002784 3.9e-06 56.6 88 38.6
Oeu007076.2 Olea europaea HOM05D000093 ORTHO05D002784 3.9e-06 56.6 89 38.2
Ah.16g101100 Amaranthus hybridus HOM05D000093 ORTHO05D002784 5.0e-06 56.2 90 37.8
A09p04150 Brassica napus HOM05D000093 ORTHO05D002784 5.0e-06 56.2 88 38.6
CARHR263510 Cardamine hirsuta HOM05D000093 ORTHO05D002784 5.0e-06 56.2 63 42.9
CiPaw.04G052600 Carya illinoinensis HOM05D000093 ORTHO05D002784 5.0e-06 56.2 116 31.9
Eucgr.L01750 Eucalyptus grandis HOM05D000093 ORTHO05D002784 5.0e-06 56.2 114 35.1
HanXRQChr15g0472771 Helianthus annuus HOM05D000093 ORTHO05D002784 5.0e-06 56.2 88 39.8
Actinidia36264 Actinidia chinensis HOM05D000093 ORTHO05D002784 6.6e-06 55.8 88 38.6
ATR0827G080 Amborella trichopoda HOM05D000093 ORTHO05D002784 6.6e-06 55.8 89 36.0
BcaC06g33711 Brassica carinata HOM05D000093 ORTHO05D002784 6.6e-06 55.8 81 42.0
CAN.G93.52 Capsicum annuum HOM05D000093 ORTHO05D002784 6.6e-06 55.8 114 34.2
Lju361A4T50 Lonicera japonica HOM05D000093 ORTHO05D002784 6.6e-06 55.8 115 33.0
HPP92_006043 Vanilla planifolia HOM05D000093 ORTHO05D002784 6.6e-06 55.8 88 40.9
CARHR153250 Cardamine hirsuta HOM05D000093 ORTHO05D002784 8.6e-06 55.5 88 37.5
CDE04G0332 Ceratophyllum demersum HOM05D000093 ORTHO05D002784 8.6e-06 55.5 89 36.0
Lj2g0000392 Lotus japonicus HOM05D000093 ORTHO05D002784 8.6e-06 55.5 87 35.6
Oeu033406.1 Olea europaea HOM05D000093 ORTHO05D002784 8.6e-06 55.5 115 33.0
Phvul.008G028800 Phaseolus vulgaris HOM05D000093 ORTHO05D002784 8.6e-06 55.5 114 34.2


User provided reference genes

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