Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09487 Striga asiatica HOM05D000097 ORTHO05D000041 8.5e-46 186.8 105 100.0
SGA_v2.0_scaffold21G09486 Striga asiatica HOM05D000097 ORTHO05D000041 4.5e-15 84.7 95 52.6
SGA_v2.0_scaffold21G09484 Striga asiatica HOM05D000097 ORTHO05D000041 2.9e-14 82.0 95 51.6
Migut.L01560 Erythranthe guttata HOM05D000097 ORTHO05D000041 7.2e-13 77.4 93 48.4
SGA_v2.0_scaffold21G09420 Striga asiatica HOM05D000097 ORTHO05D000041 2.7e-12 75.5 91 50.5
Migut.L01557 Erythranthe guttata HOM05D000097 ORTHO05D000041 1.4e-11 73.2 45 75.6
Rhsim05G0008700 Rhododendron simsii HOM05D000097 ORTHO05D000041 5.2e-11 71.2 93 45.2
Rhsim07G0100000 Rhododendron simsii HOM05D000097 ORTHO05D000041 5.2e-11 71.2 94 42.6
CSS0030643 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 6.8e-11 70.9 96 43.8
Rhsim11G0102700 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.8e-11 70.9 93 46.2
Rhsim11G0103100 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.5e-10 69.7 94 44.7
CSS0035719 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 2.0e-10 69.3 96 43.8
CSS0036423 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 2.0e-10 69.3 96 43.8
Migut.J00929 Erythranthe guttata HOM05D000097 ORTHO05D000041 2.0e-10 69.3 87 44.8
Hma1.2p1_0560F.1_g178790 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.0e-10 69.3 87 48.3
Rhsim07G0099600 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.0e-10 69.3 49 65.3
CSS0029400 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 2.6e-10 68.9 95 43.2
Dinv32136 Davidia involucrata HOM05D000097 ORTHO05D000041 2.6e-10 68.9 93 43.0
Hma1.2p1_0311F.1_g121090 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.6e-10 68.9 93 44.1
Rhsim05G0010300 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.6e-10 68.9 95 45.3
vmacro04304 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 3.4e-10 68.6 45 68.9
Lju363A0T14 Lonicera japonica HOM05D000097 ORTHO05D000041 4.4e-10 68.2 90 42.2
RhsimUnG0192800 Rhododendron simsii HOM05D000097 ORTHO05D000041 4.4e-10 68.2 94 42.6
Dinv11240 Davidia involucrata HOM05D000097 ORTHO05D000041 5.7e-10 67.8 93 44.1
Hma1.2p1_0446F.1_g154540 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 5.7e-10 67.8 93 39.8
Rhsim05G0007900 Rhododendron simsii HOM05D000097 ORTHO05D000041 5.7e-10 67.8 87 47.1
vmacro22775 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 5.7e-10 67.8 93 41.9
Lj9C21G7 Lonicera japonica HOM05D000097 ORTHO05D000041 7.5e-10 67.4 93 41.9
Lj9C21T5 Lonicera japonica HOM05D000097 ORTHO05D000041 7.5e-10 67.4 93 41.9
Rhsim05G0147100 Rhododendron simsii HOM05D000097 ORTHO05D000041 7.5e-10 67.4 93 45.2
Rhsim05G0058400 Rhododendron simsii HOM05D000097 ORTHO05D000041 9.8e-10 67.0 94 40.4
Dinv06773 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-09 66.6 94 41.5
Dinv10726 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-09 66.6 93 43.0
Hma1.2p1_0560F.1_g178770 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.3e-09 66.6 93 41.9
Solyc05g041440.4 Solanum lycopersicum HOM05D000097 ORTHO05D000041 1.3e-09 66.6 49 55.1
CSS0003629 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.7e-09 66.2 88 44.3
Lsat_1_v5_gn_6_85720 Lactuca sativa HOM05D000097 ORTHO05D000041 1.7e-09 66.2 84 42.9
CSS0011188 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 2.2e-09 65.9 95 42.1
ECA248G1065 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.2e-09 65.9 90 38.9
Dinv02040 Davidia involucrata HOM05D000097 ORTHO05D000041 2.8e-09 65.5 94 40.4
Hma1.2p1_0446F.1_g154550 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.8e-09 65.5 94 42.6
Hma1.2p1_0446F.1_g154555 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.8e-09 65.5 94 42.6
Dinv02033 Davidia involucrata HOM05D000097 ORTHO05D000041 4.9e-09 64.7 49 61.2
Rhsim07G0242500 Rhododendron simsii HOM05D000097 ORTHO05D000041 4.9e-09 64.7 49 67.3
Sopen05g025670 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-09 64.7 45 55.6
PGSC0003DMG400020759 Solanum tuberosum HOM05D000097 ORTHO05D000041 4.9e-09 64.7 88 37.5
Manes.16G095700 Manihot esculenta HOM05D000097 ORTHO05D000041 6.3e-09 64.3 49 63.3
Rhsim05G0010200 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.3e-09 64.3 49 63.3
Rhsim05G0057200 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.3e-09 64.3 89 40.4
HanXRQChr11g0353581 Helianthus annuus HOM05D000097 ORTHO05D000041 1.1e-08 63.5 90 38.9
vmacro17198 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.1e-08 63.5 93 39.8
vmacro22581 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.1e-08 63.5 93 39.8
HanXRQChr17g0553721 Helianthus annuus HOM05D000097 ORTHO05D000041 1.4e-08 63.2 98 35.7
Hma1.2p1_0560F.1_g178780 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.4e-08 63.2 93 43.0
Actinidia39662 Actinidia chinensis HOM05D000097 ORTHO05D000041 1.8e-08 62.8 93 39.8
Dinv03003 Davidia involucrata HOM05D000097 ORTHO05D000041 1.8e-08 62.8 89 42.7
vmacro17195 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.4e-08 62.4 49 57.1
Dinv06613 Davidia involucrata HOM05D000097 ORTHO05D000041 3.1e-08 62.0 46 60.9
Lsat_1_v5_gn_1_85620 Lactuca sativa HOM05D000097 ORTHO05D000041 3.1e-08 62.0 95 40.0
Lj7A688T79 Lonicera japonica HOM05D000097 ORTHO05D000041 3.1e-08 62.0 96 40.6
Lju363A1T23 Lonicera japonica HOM05D000097 ORTHO05D000041 3.1e-08 62.0 93 40.9
Lju722A0G23 Lonicera japonica HOM05D000097 ORTHO05D000041 3.1e-08 62.0 93 40.9
SGA_v2.0_scaffold91G28110 Striga asiatica HOM05D000097 ORTHO05D000041 3.1e-08 62.0 45 64.4
ECA240G0142 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.1e-08 61.6 52 51.9
HanXRQChr11g0353571 Helianthus annuus HOM05D000097 ORTHO05D000041 4.1e-08 61.6 42 61.9
HanXRQChr11g0353591 Helianthus annuus HOM05D000097 ORTHO05D000041 4.1e-08 61.6 90 36.7
HanXRQChr13g0394651 Helianthus annuus HOM05D000097 ORTHO05D000041 4.1e-08 61.6 94 37.2
Hma1.2p1_2656F.1_g326350 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.1e-08 61.6 94 37.2
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 5.4e-08 61.2 89 41.6
Dinv13259 Davidia involucrata HOM05D000097 ORTHO05D000041 5.4e-08 61.2 94 41.5
ECA238G2578 Erigeron canadensis HOM05D000097 ORTHO05D000041 5.4e-08 61.2 86 37.2
ECA247G0481 Erigeron canadensis HOM05D000097 ORTHO05D000041 5.4e-08 61.2 42 61.9
ECA247G3079 Erigeron canadensis HOM05D000097 ORTHO05D000041 5.4e-08 61.2 42 57.1
ECA248G3700 Erigeron canadensis HOM05D000097 ORTHO05D000041 5.4e-08 61.2 42 61.9
Nitab4.5_0000771g0090 Nicotiana tabacum HOM05D000097 ORTHO05D000041 5.4e-08 61.2 46 63.0
vmacro17197 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 5.4e-08 61.2 45 66.7
vmacro22582 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 5.4e-08 61.2 45 66.7
Cc06_g12360 Coffea canephora HOM05D000097 ORTHO05D000041 7.0e-08 60.8 49 53.1
Lsat_1_v5_gn_1_116121 Lactuca sativa HOM05D000097 ORTHO05D000041 7.0e-08 60.8 42 64.3
Nitab4.5_0005356g0080 Nicotiana tabacum HOM05D000097 ORTHO05D000041 7.0e-08 60.8 46 63.0
vmacro10269 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 7.0e-08 60.8 94 34.0
ECA248G1599 Erigeron canadensis HOM05D000097 ORTHO05D000041 9.2e-08 60.5 42 61.9
Dinv06779 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-07 60.1 49 57.1
Dinv09594 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-07 60.1 94 38.3
Dinv15019 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-07 60.1 93 40.9
Dinv23999 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-07 60.1 93 40.9
Dinv00959 Davidia involucrata HOM05D000097 ORTHO05D000041 1.6e-07 59.7 94 40.4
Dinv13260 Davidia involucrata HOM05D000097 ORTHO05D000041 1.6e-07 59.7 94 40.4
Hma1.2p1_2243F.1_g317890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.6e-07 59.7 49 57.1
Hma1.2p1_2656F.1_g326310 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.6e-07 59.7 94 37.2
Hund19270 Selenicereus undatus HOM05D000097 ORTHO05D000041 1.6e-07 59.7 45 68.9
vmacro22585 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.6e-07 59.7 93 38.7
COL.COLO4_24915 Corchorus olitorius HOM05D000097 ORTHO05D000041 2.0e-07 59.3 92 41.3
ECA248G0302 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.0e-07 59.3 87 39.1
Rhsim03G0044300 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.0e-07 59.3 49 63.3
Dinv07196 Davidia involucrata HOM05D000097 ORTHO05D000041 2.7e-07 58.9 94 39.4
Dinv07199 Davidia involucrata HOM05D000097 ORTHO05D000041 2.7e-07 58.9 94 39.4
Dinv09584 Davidia involucrata HOM05D000097 ORTHO05D000041 2.7e-07 58.9 94 39.4
HanXRQChr01g0028891 Helianthus annuus HOM05D000097 ORTHO05D000041 2.7e-07 58.9 47 59.6
HanXRQChr03g0063851 Helianthus annuus HOM05D000097 ORTHO05D000041 2.7e-07 58.9 94 37.2
Nitab4.5_0000789g0110 Nicotiana tabacum HOM05D000097 ORTHO05D000041 2.7e-07 58.9 41 53.7
Lsat_1_v5_gn_1_43320 Lactuca sativa HOM05D000097 ORTHO05D000041 3.5e-07 58.5 90 36.7
Lsat_1_v5_gn_2_40481 Lactuca sativa HOM05D000097 ORTHO05D000041 3.5e-07 58.5 50 52.0
Lj6C386G3 Lonicera japonica HOM05D000097 ORTHO05D000041 3.5e-07 58.5 94 39.4
vmacro10272 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 3.5e-07 58.5 94 35.1
Lsat_1_v5_gn_7_39020 Lactuca sativa HOM05D000097 ORTHO05D000041 4.5e-07 58.2 46 58.7
Dinv13272 Davidia involucrata HOM05D000097 ORTHO05D000041 5.9e-07 57.8 94 39.4
HanXRQChr06g0165241 Helianthus annuus HOM05D000097 ORTHO05D000041 5.9e-07 57.8 42 61.9
Lsat_1_v5_gn_0_25401 Lactuca sativa HOM05D000097 ORTHO05D000041 5.9e-07 57.8 46 58.7
Lsat_1_v5_gn_7_44800 Lactuca sativa HOM05D000097 ORTHO05D000041 5.9e-07 57.8 46 58.7
Lsat_1_v5_gn_8_125660 Lactuca sativa HOM05D000097 ORTHO05D000041 5.9e-07 57.8 46 56.5
Lj6C385G14 Lonicera japonica HOM05D000097 ORTHO05D000041 5.9e-07 57.8 94 39.4
Dinv05037 Davidia involucrata HOM05D000097 ORTHO05D000041 7.7e-07 57.4 45 57.8
ECA248G0893 Erigeron canadensis HOM05D000097 ORTHO05D000041 7.7e-07 57.4 42 59.5
Lsat_1_v5_gn_7_39201 Lactuca sativa HOM05D000097 ORTHO05D000041 7.7e-07 57.4 46 58.7
Nitab4.5_0002209g0040 Nicotiana tabacum HOM05D000097 ORTHO05D000041 7.7e-07 57.4 52 53.8
Nitab4.5_0003104g0060 Nicotiana tabacum HOM05D000097 ORTHO05D000041 7.7e-07 57.4 52 53.8
Rhsim03G0103300 Rhododendron simsii HOM05D000097 ORTHO05D000041 7.7e-07 57.4 49 61.2
Dinv02036 Davidia involucrata HOM05D000097 ORTHO05D000041 1.0e-06 57.0 48 58.3
Lsat_1_v5_gn_0_25361 Lactuca sativa HOM05D000097 ORTHO05D000041 1.0e-06 57.0 46 56.5
Rhsim03G0048500 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.0e-06 57.0 94 40.4
vmacro10273 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.0e-06 57.0 94 34.0
Ah.04g154450 Amaranthus hybridus HOM05D000097 ORTHO05D000041 1.3e-06 56.6 94 37.2
Dinv09588 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-06 56.6 45 62.2
Dinv13271 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-06 56.6 94 38.3
Rhsim05G0059500 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.3e-06 56.6 56 50.0
CSS0026463 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.7e-06 56.2 89 37.1
Dinv03804 Davidia involucrata HOM05D000097 ORTHO05D000041 1.7e-06 56.2 94 39.4
Dinv04610 Davidia involucrata HOM05D000097 ORTHO05D000041 1.7e-06 56.2 94 38.3
Dinv13269 Davidia involucrata HOM05D000097 ORTHO05D000041 1.7e-06 56.2 94 38.3
Lsat_1_v5_gn_7_37940 Lactuca sativa HOM05D000097 ORTHO05D000041 1.7e-06 56.2 46 54.3
Lj7A686G70 Lonicera japonica HOM05D000097 ORTHO05D000041 1.7e-06 56.2 84 42.9
Rhsim03G0047300 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.7e-06 56.2 94 37.2
Dinv14517 Davidia involucrata HOM05D000097 ORTHO05D000041 2.3e-06 55.8 49 59.2
HanXRQChr09g0244201 Helianthus annuus HOM05D000097 ORTHO05D000041 2.3e-06 55.8 94 34.0
Lj6A388G44 Lonicera japonica HOM05D000097 ORTHO05D000041 2.3e-06 55.8 94 38.3
Nitab4.5_0000045g0510 Nicotiana tabacum HOM05D000097 ORTHO05D000041 2.3e-06 55.8 49 49.0
Peaxi162Scf00079g01612 Petunia axillaris HOM05D000097 ORTHO05D000041 2.3e-06 55.8 46 58.7
Rhsim03G0046900 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.3e-06 55.8 49 61.2
Rhsim03G0047200 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.3e-06 55.8 94 39.4
Rhsim03G0047800 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.3e-06 55.8 94 40.4
Rhsim05G0008000 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.3e-06 55.8 45 57.8
Rhsim05G0008900 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.3e-06 55.8 45 57.8
Lsat_1_v5_gn_0_25501 Lactuca sativa HOM05D000097 ORTHO05D000041 2.9e-06 55.5 46 56.5
Lsat_1_v5_gn_7_37621 Lactuca sativa HOM05D000097 ORTHO05D000041 2.9e-06 55.5 42 59.5
Lsat_1_v5_gn_9_86381 Lactuca sativa HOM05D000097 ORTHO05D000041 2.9e-06 55.5 42 57.1
Lj3C929T0 Lonicera japonica HOM05D000097 ORTHO05D000041 2.9e-06 55.5 49 55.1
Rhsim05G0009000 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.9e-06 55.5 93 36.6
CSS0031127 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 3.8e-06 55.1 45 62.2
HanXRQChr10g0303341 Helianthus annuus HOM05D000097 ORTHO05D000041 3.8e-06 55.1 54 46.3
Lsat_1_v5_gn_4_140740 Lactuca sativa HOM05D000097 ORTHO05D000041 3.8e-06 55.1 46 56.5
GSVIVG01014901001 Vitis vinifera HOM05D000097 ORTHO05D000041 3.8e-06 55.1 45 51.1
Dinv23993 Davidia involucrata HOM05D000097 ORTHO05D000041 5.0e-06 54.7 45 53.3
ECA238G4427 Erigeron canadensis HOM05D000097 ORTHO05D000041 5.0e-06 54.7 42 54.8
Lsat_1_v5_gn_7_39281 Lactuca sativa HOM05D000097 ORTHO05D000041 5.0e-06 54.7 48 47.9
Peaxi162Scf00473g00015 Petunia axillaris HOM05D000097 ORTHO05D000041 5.0e-06 54.7 46 56.5
Rhsim02G0235900 Rhododendron simsii HOM05D000097 ORTHO05D000041 5.0e-06 54.7 49 57.1
Rhsim03G0047100 Rhododendron simsii HOM05D000097 ORTHO05D000041 5.0e-06 54.7 49 57.1
Rhsim03G0048200 Rhododendron simsii HOM05D000097 ORTHO05D000041 5.0e-06 54.7 94 37.2
Dinv01772 Davidia involucrata HOM05D000097 ORTHO05D000041 6.6e-06 54.3 49 57.1
ECA240G3353 Erigeron canadensis HOM05D000097 ORTHO05D000041 6.6e-06 54.3 42 59.5
HanXRQChr16g0512561 Helianthus annuus HOM05D000097 ORTHO05D000041 6.6e-06 54.3 89 33.7
TWI15G0584 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 6.6e-06 54.3 67 46.3
Actinidia30213 Actinidia chinensis HOM05D000097 ORTHO05D000041 8.6e-06 53.9 94 35.1
ECA247G4059 Erigeron canadensis HOM05D000097 ORTHO05D000041 8.6e-06 53.9 42 57.1
Hma1.2p1_1761F.1_g301280 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 8.6e-06 53.9 49 55.1
Lsat_1_v5_gn_7_37641 Lactuca sativa HOM05D000097 ORTHO05D000041 8.6e-06 53.9 46 52.2
Lj6C388G7 Lonicera japonica HOM05D000097 ORTHO05D000041 8.6e-06 53.9 45 55.6
Rhsim03G0102400 Rhododendron simsii HOM05D000097 ORTHO05D000041 8.6e-06 53.9 49 59.2


User provided reference genes

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