Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.6e-242 842.4 441 100.0
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 3.3e-192 675.2 416 86.8
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 3.2e-179 632.1 412 83.0
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 7.9e-178 627.5 388 85.6
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.4e-174 616.7 396 83.6
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 6.0e-170 601.3 406 76.6
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.8e-169 599.7 406 78.8
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 7.2e-163 577.8 408 77.0
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.8e-161 573.2 408 75.2
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 2.3e-161 572.8 410 76.6
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 3.9e-161 572.0 382 79.1
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 3.9e-161 572.0 411 74.2
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.1e-160 570.5 389 78.9
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.5e-160 570.1 412 74.5
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 9.7e-160 567.4 395 77.2
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 9.7e-160 567.4 396 76.5
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 2.2e-159 566.2 398 74.6
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.2e-159 566.2 393 77.4
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 2.8e-159 565.8 408 73.3
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 1.1e-158 563.9 408 74.5
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.4e-158 562.8 412 75.0
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 3.1e-158 562.4 419 72.3
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.1e-158 562.4 419 72.3
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.5e-157 560.1 396 75.8
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.5e-157 560.1 408 71.1
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.0e-157 559.7 395 75.9
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.4e-157 558.9 395 75.7
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 5.9e-157 558.1 398 74.9
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.9e-157 558.1 396 72.0
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.9e-157 558.1 408 71.3
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.7e-156 556.6 395 75.4
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 1.7e-156 556.6 391 76.0
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 1.7e-156 556.6 391 76.0
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 2.9e-156 555.8 407 72.0
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.9e-156 555.8 408 73.8
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.8e-156 555.4 389 73.0
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 5.0e-156 555.1 383 76.2
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 5.0e-156 555.1 395 74.2
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 6.5e-156 554.7 409 68.7
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 6.5e-156 554.7 394 75.9
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 6.5e-156 554.7 390 72.8
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 8.5e-156 554.3 383 75.7
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.4e-155 553.5 390 72.3
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 1.4e-155 553.5 395 72.2
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.9e-155 553.1 403 72.2
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.9e-155 553.1 395 74.9
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.9e-155 553.1 396 73.7
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 2.5e-155 552.7 382 74.1
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 4.2e-155 552.0 373 75.1
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 5.5e-155 551.6 385 73.2
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.2e-155 551.2 400 72.8
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 7.2e-155 551.2 384 77.1
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 9.4e-155 550.8 412 73.3
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 9.4e-155 550.8 400 72.8
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 1.2e-154 550.4 409 69.4
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.6e-154 550.1 395 71.1
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.7e-154 549.3 408 71.3
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 2.7e-154 549.3 383 74.9
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 2.7e-154 549.3 374 78.3
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 4.7e-154 548.5 384 76.8
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 4.7e-154 548.5 384 76.8
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 4.7e-154 548.5 402 73.9
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 7.9e-154 547.7 377 76.9
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 7.9e-154 547.7 380 75.8
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.9e-154 547.7 400 72.2
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.0e-153 547.4 399 73.2
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.8e-153 546.6 402 74.6
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.3e-153 546.2 409 69.2
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 6.7e-153 544.7 399 73.2
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 8.8e-153 544.3 403 73.9
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 8.8e-153 544.3 399 73.4
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.1e-152 543.9 386 73.8
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.1e-152 543.9 385 72.7
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 2.6e-152 542.7 401 73.1
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 2.6e-152 542.7 377 73.5
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 3.3e-152 542.3 380 73.4
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 4.4e-152 542.0 408 68.9
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 5.7e-152 541.6 408 68.6
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 7.4e-152 541.2 384 76.0
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.3e-151 540.4 375 73.1
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.3e-151 540.4 394 71.8
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 8.2e-151 537.7 391 74.2
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 1.1e-150 537.3 408 71.6
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 3.1e-150 535.8 384 75.5
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 3.1e-150 535.8 430 65.6
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 5.3e-150 535.0 383 73.4
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 9.1e-150 534.3 410 70.0
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.0e-149 533.1 355 78.0
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.5e-149 531.9 402 71.9
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 7.7e-149 531.2 379 75.5
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 7.7e-149 531.2 384 75.0
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 7.7e-149 531.2 384 75.0
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 7.7e-149 531.2 379 71.0
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 3.8e-148 528.9 396 68.2
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 3.8e-148 528.9 360 76.1
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 5.0e-148 528.5 383 74.2
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.5e-148 528.1 360 76.1
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.1e-147 527.3 401 71.1
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.2e-147 525.4 360 75.8
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 4.2e-147 525.4 333 78.4
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 9.4e-147 524.2 427 68.4
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.2e-146 523.9 332 76.8
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 8.0e-146 521.2 394 67.3
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 3.9e-145 518.8 382 69.1
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 8.8e-145 517.7 362 72.1
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.6e-144 516.2 473 62.8
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 3.3e-144 515.8 390 69.0
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 4.4e-144 515.4 405 69.9
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 5.7e-144 515.0 351 72.9
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 7.4e-144 514.6 369 72.6
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.8e-143 512.7 367 71.1
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 2.8e-143 512.7 406 70.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 8.2e-143 511.1 389 68.6
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 8.2e-143 511.1 326 76.7
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.4e-142 510.4 399 69.4
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 2.4e-142 509.6 338 74.0
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 4.1e-142 508.8 408 69.4
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 5.3e-142 508.4 379 70.2
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.9e-139 500.0 408 69.4
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 2.5e-139 499.6 327 74.0
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 2.1e-138 496.5 367 69.5
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-136 490.7 334 71.6
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.2e-136 490.7 391 63.7
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 2.0e-136 490.0 367 68.1
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 1.8e-134 483.4 408 65.0
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 7.0e-134 481.5 321 74.1
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.8e-129 466.8 322 76.7
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.2e-128 464.2 318 78.6
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 1.5e-128 463.8 372 69.6
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 2.6e-128 463.0 290 77.6
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 4.4e-128 462.2 395 65.3
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 9.8e-128 461.1 404 65.1
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.7e-127 460.3 319 68.7
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 5.9e-125 451.8 384 66.7
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 2.9e-124 449.5 380 59.7
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.8e-122 443.0 412 60.4
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 4.0e-121 439.1 300 71.7
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.0e-117 426.8 287 75.3
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 6.6e-116 421.8 319 63.0
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.5e-115 420.6 379 61.2
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.5e-115 419.9 391 57.8
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 3.3e-115 419.5 360 56.9
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 8.0e-114 414.8 382 55.2
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.0e-112 410.2 320 62.8
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 6.6e-108 395.2 344 57.8
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 3.3e-107 392.9 392 60.7
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 6.2e-106 388.7 427 51.8
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 6.2e-106 388.7 222 84.2
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.0e-104 383.6 241 78.8
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 9.6e-91 338.2 376 51.9
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 6.6e-84 315.5 247 67.6
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 3.3e-83 313.2 260 59.2
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 1.6e-66 257.7 151 81.5
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.7e-66 256.5 338 47.9
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.6e-58 231.1 190 69.5
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 2.0e-56 224.2 197 58.4
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 3.1e-41 173.7 164 54.9
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.5e-32 144.8 96 71.9
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.0e-27 127.9 100 62.0
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 6.3e-26 122.9 326 29.1
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.9e-23 114.0 251 35.1
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 8.5e-23 112.5 65 78.5
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.5e-22 111.7 383 27.2
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 4.0e-20 103.6 318 26.7
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.3e-18 98.6 90 78.9
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.3e-18 98.6 91 75.8
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 3.1e-17 94.0 68 66.2
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 3.1e-17 94.0 68 66.2
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 7.0e-17 92.8 68 66.2
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 5.9e-16 89.7 79 59.5
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.7e-15 88.2 59 72.9
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 9.4e-14 82.4 398 24.4
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.6e-08 65.1 33 84.8
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.0e-07 62.4 41 70.7
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 1.3e-07 62.0 72 75.0
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.7e-07 61.6 129 28.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.7e-07 61.6 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 2.3e-07 61.2 38 73.7
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 6.6e-07 59.7 92 39.1
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 1.9e-06 58.2 36 75.0


User provided reference genes

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