Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09432 Striga asiatica HOM05D049040 ORTHO05D009175 6.7e-173 610.5 295 100.0
SGA_v2.0_scaffold10G05347 Striga asiatica HOM05D007205 ORTHO05D009175 2.4e-29 133.7 81 82.7
SGA_v2.0_scaffold70G23481 Striga asiatica HOM05D007205 ORTHO05D009175 4.1e-21 106.3 67 80.6
Migut.F01128 Erythranthe guttata HOM05D007205 ORTHO05D009175 6.8e-16 89.0 81 50.6
SGA_v2.0_scaffold206G41836 Striga asiatica HOM05D049040 ORTHO05D405134 6.8e-16 89.0 42 95.2
SalBow2G2732 Salvia bowleyana HOM05D007205 ORTHO05D009175 2.8e-14 83.6 81 49.4
Hma1.2p1_0712F.1_g207580 Hydrangea macrophylla HOM05D007205 ORTHO05D009175 1.2e-09 68.2 85 42.4
Oeu040642.1 Olea europaea HOM05D007205 ORTHO05D009175 1.6e-09 67.8 84 46.4
Potri.013G152200 Populus trichocarpa HOM05D007205 ORTHO05D009175 2.1e-09 67.4 84 44.0
Gohir.A03G162500 Gossypium hirsutum HOM05D007205 ORTHO05D009175 1.0e-08 65.1 86 40.7
Nitab4.5_0009996g0030 Nicotiana tabacum HOM05D007205 ORTHO05D009175 1.0e-08 65.1 84 41.7
Solyc07g053000.1 Solanum lycopersicum HOM05D007205 ORTHO05D009175 1.4e-08 64.7 84 39.3
Sopen07g026550 Solanum pennellii HOM05D007205 ORTHO05D009175 1.4e-08 64.7 84 39.3
TAR626G1876 Trochodendron aralioides HOM05D007205 ORTHO05D009175 1.4e-08 64.7 85 40.0
Dinv18560 Davidia involucrata HOM05D007205 ORTHO05D009175 3.0e-08 63.5 84 45.2
Gorai.005G208100 Gossypium raimondii HOM05D007205 ORTHO05D009175 3.0e-08 63.5 86 39.5
Gohir.D02G185500 Gossypium hirsutum HOM05D007205 ORTHO05D009175 4.0e-08 63.2 85 40.0
Sabra13G0122300 Salix brachista HOM05D007205 ORTHO05D009175 4.0e-08 63.2 84 40.5
Duzib132G1034 Durio zibethinus HOM05D007205 ORTHO05D009175 5.2e-08 62.8 85 40.0
PGSC0003DMG400040434 Solanum tuberosum HOM05D007205 ORTHO05D009175 8.8e-08 62.0 81 38.3
Thecc.02G165600 Theobroma cacao HOM05D007205 ORTHO05D009175 8.8e-08 62.0 85 40.0
Manes.12G078600 Manihot esculenta HOM05D007205 ORTHO05D009175 1.2e-07 61.6 84 40.5
Nitab4.5_0001134g0050 Nicotiana tabacum HOM05D007205 ORTHO05D009175 4.4e-07 59.7 66 43.9
Cpa.g.sc34.48 Carica papaya HOM05D007205 ORTHO05D009175 5.7e-07 59.3 81 39.5
Nn5g28818 Nelumbo nucifera HOM05D007205 ORTHO05D009175 9.8e-07 58.5 86 34.9
Ciclev10018085m.g Citrus clementina HOM05D007205 ORTHO05D009175 1.3e-06 58.2 84 38.1
CAN.G86.36 Capsicum annuum HOM05D007205 ORTHO05D009175 1.7e-06 57.8 84 34.5
Ca_01558_v3 Cicer arietinum L. HOM05D007205 ORTHO05D009175 2.8e-06 57.0 85 35.3
Peaxi162Scf00007g00153 Petunia axillaris HOM05D007205 ORTHO05D009175 2.8e-06 57.0 84 35.7
COL.COLO4_13041 Corchorus olitorius HOM05D007205 ORTHO05D009175 3.7e-06 56.6 85 35.3
Cfa014480 Carpinus fangiana HOM05D007205 ORTHO05D009175 4.8e-06 56.2 82 36.6
DCAR_019203 Daucus carota HOM05D007205 ORTHO05D009175 8.3e-06 55.5 85 34.1


User provided reference genes

Program Settings