Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09397 Striga asiatica HOM05D017425 ORTHO05D019383 2.6e-186 655.2 326 100.0
SGA_v2.0_scaffold240G44139 Striga asiatica HOM05D017425 ORTHO05D019383 6.9e-163 577.4 329 86.3
SGA_v2.0_scaffold326G48722 Striga asiatica HOM05D017425 ORTHO05D019383 6.9e-163 577.4 329 86.3
SGA_v2.0_scaffold32G13121 Striga asiatica HOM05D017425 ORTHO05D019383 6.9e-163 577.4 329 86.3
SGA_v2.0_scaffold41G15799 Striga asiatica HOM05D017425 ORTHO05D019383 1.7e-148 529.6 301 86.4
SGA_v2.0_scaffold341G49383 Striga asiatica HOM05D017425 ORTHO05D019383 4.7e-143 511.5 316 83.5
SGA_v2.0_scaffold116G32293 Striga asiatica HOM05D017425 ORTHO05D019383 9.4e-128 460.7 334 72.2
SGA_v2.0_scaffold416G51226 Striga asiatica HOM05D017425 ORTHO05D019383 6.8e-118 427.9 282 77.7
DCAR_017370 Daucus carota HOM05D002069 ORTHO05D001421 2.4e-14 84.0 297 23.2
DCAR_011112 Daucus carota HOM05D008184 ORTHO05D001421 1.7e-12 77.8 309 22.3
HanXRQChr10g0309881 Helianthus annuus HOM05D002069 ORTHO05D001421 2.1e-10 70.9 261 24.9
SGA_v2.0_scaffold309G48185 Striga asiatica HOM05D002069 ORTHO05D002997 2.7e-10 70.5 320 23.8
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 5.2e-09 66.2 290 25.5
DCAR_001468 Daucus carota HOM05D002069 ORTHO05D001421 6.8e-09 65.9 290 25.5
DCAR_001028 Daucus carota HOM05D008184 ORTHO05D002997 5.7e-08 62.8 180 26.1
DCAR_030272 Daucus carota HOM05D008184 ORTHO05D001421 1.7e-07 61.2 180 26.1
Lsat_1_v5_gn_6_93140 Lactuca sativa HOM05D005502 ORTHO05D001421 2.8e-07 60.5 244 23.0
Lsat_1_v5_gn_4_60840 Lactuca sativa HOM05D005502 ORTHO05D001421 3.1e-06 57.0 244 23.0
HanXRQChr14g0439041 Helianthus annuus HOM05D002069 ORTHO05D001421 4.1e-06 56.6 152 27.6
DCAR_030060 Daucus carota HOM05D014044 ORTHO05D015632 7.0e-06 55.8 164 29.3


User provided reference genes

Program Settings