Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09390 Striga asiatica HOM05D005251 ORTHO05D006680 1.8e-238 828.9 434 100.0
MSTRG.10560 Avicennia marina HOM05D005251 ORTHO05D006680 7.5e-173 610.9 429 77.2
Migut.L01497 Erythranthe guttata HOM05D005251 ORTHO05D006680 4.9e-172 608.2 423 77.5
Oeu018416.2 Olea europaea HOM05D005251 ORTHO05D006680 2.5e-160 569.3 427 72.1
Dinv36771 Davidia involucrata HOM05D005251 ORTHO05D006680 2.2e-156 556.2 408 72.5
PGSC0003DMG400000278 Solanum tuberosum HOM05D005251 ORTHO05D006680 6.0e-154 548.1 428 70.3
CAN.G1241.24 Capsicum annuum HOM05D005251 ORTHO05D006680 7.3e-152 541.2 433 68.6
Cc06_g11450 Coffea canephora HOM05D005251 ORTHO05D006680 2.1e-151 539.7 407 70.5
CSS0048193 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 5.4e-147 525.0 406 69.0
GSVIVG01015197001 Vitis vinifera HOM05D005251 ORTHO05D006680 7.1e-147 524.6 427 68.1
Thecc.09G088600 Theobroma cacao HOM05D005251 ORTHO05D006680 1.6e-146 523.5 408 68.6
CSS0047543 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 2.1e-146 523.1 406 68.7
Lj4A303G24 Lonicera japonica HOM05D005251 ORTHO05D006680 2.3e-145 519.6 429 66.0
Ciclev10010506m.g Citrus clementina HOM05D005251 ORTHO05D006680 5.1e-145 518.5 429 65.3
Gohir.A06G072900 Gossypium hirsutum HOM05D005251 ORTHO05D006680 7.3e-144 514.6 430 65.3
Prupe.7G209200 Prunus persica HOM05D005251 ORTHO05D006680 1.3e-143 513.8 423 66.7
Gorai.010G083200 Gossypium raimondii HOM05D005251 ORTHO05D006680 1.6e-143 513.5 430 65.1
TWI34G0442 Tripterygium wilfordii HOM05D005251 ORTHO05D006680 1.8e-142 510.0 429 63.9
vmacro17241 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 5.8e-141 505.0 407 67.3
Peaxi162Scf00498g00321 Petunia axillaris HOM05D005251 ORTHO05D006680 9.9e-141 504.2 400 65.5
Rhsim05G0020500 Rhododendron simsii HOM05D005251 ORTHO05D006680 9.9e-141 504.2 407 67.1
Eucgr.C00887 Eucalyptus grandis HOM05D005251 ORTHO05D006680 1.3e-140 503.8 408 66.9
Atru.BG.14.p Acer truncatum HOM05D005251 ORTHO05D006680 1.7e-140 503.4 430 65.6
COL.COLO4_18196 Corchorus olitorius HOM05D005251 ORTHO05D006680 1.7e-140 503.4 421 63.4
MD02G1080200 Malus domestica HOM05D005251 ORTHO05D006680 1.7e-140 503.4 415 66.5
CiPaw.03G215300 Carya illinoinensis HOM05D005251 ORTHO05D006680 2.2e-140 503.1 423 64.8
HanXRQChr06g0178551 Helianthus annuus HOM05D005251 ORTHO05D006680 4.6e-138 495.4 429 65.3
Lsat_1_v5_gn_8_87701 Lactuca sativa HOM05D005251 ORTHO05D006680 7.8e-138 494.6 429 62.7
FAN19G0073 Fragaria x ananassa HOM05D005251 ORTHO05D006680 3.9e-137 492.3 424 64.4
Gohir.D06G071400 Gossypium hirsutum HOM05D005251 ORTHO05D006680 3.9e-137 492.3 468 59.8
Cfa003082 Carpinus fangiana HOM05D005251 ORTHO05D006680 5.1e-137 491.9 408 67.2
CANSAT56G1459 Cannabis sativa HOM05D005251 ORTHO05D006680 8.7e-137 491.1 433 62.1
Actinidia39715 Actinidia chinensis HOM05D005251 ORTHO05D006680 1.9e-136 490.0 407 65.8
FvH4_1g07540 Fragaria vesca HOM05D005251 ORTHO05D006680 1.9e-136 490.0 424 64.2
Glyma.13G104400 Glycine max HOM05D005251 ORTHO05D006680 3.3e-136 489.2 421 65.1
FAN23G1060 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.3e-136 488.8 424 63.4
PGR142G3350 Punica granatum HOM05D005251 ORTHO05D006680 5.6e-136 488.4 429 63.6
FAN28G0072 Fragaria x ananassa HOM05D005251 ORTHO05D006680 9.6e-136 487.6 430 63.7
Manes.03G034200 Manihot esculenta HOM05D005251 ORTHO05D006680 1.6e-135 486.9 429 63.2
Potri.006G152100 Populus trichocarpa HOM05D005251 ORTHO05D006680 1.6e-135 486.9 427 63.2
TAR624G0724 Trochodendron aralioides HOM05D005251 ORTHO05D006680 2.1e-135 486.5 408 65.2
ClCG03G015560 Citrullus lanatus HOM05D005251 ORTHO05D006680 1.8e-134 483.4 408 63.2
MELO3C015476.2 Cucumis melo HOM05D005251 ORTHO05D006680 1.8e-134 483.4 428 61.7
CsaV3_1G040480 Cucumis sativus L. HOM05D005251 ORTHO05D006680 6.9e-134 481.5 408 63.5
RcHm_v2.0_Chr2g0093421 Rosa chinensis HOM05D005251 ORTHO05D006680 1.2e-133 480.7 428 62.9
FAN26G1479 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.5e-133 480.3 418 63.9
Lalb_Chr12g0199791 Lupinus albus HOM05D005251 ORTHO05D006680 1.5e-133 480.3 428 63.8
FAN26G3339 Fragaria x ananassa HOM05D005251 ORTHO05D006680 3.4e-133 479.2 418 63.6
AUR62033961 Chenopodium quinoa HOM05D005251 ORTHO05D006680 4.5e-133 478.8 428 62.9
AUR62029068 Chenopodium quinoa HOM05D005251 ORTHO05D006680 5.8e-133 478.4 428 62.6
Ah.09g228240 Amaranthus hybridus HOM05D005251 ORTHO05D006680 3.8e-132 475.7 422 62.6
EL10Ac8g19209 Beta vulgaris HOM05D005251 ORTHO05D006680 4.9e-132 475.3 428 63.1
Cpa.g.sc61.41 Carica papaya HOM05D005251 ORTHO05D006680 4.9e-132 475.3 429 57.6
Medtr4g126260 Medicago truncatula HOM05D005251 ORTHO05D006680 1.1e-131 474.2 428 63.1
TPR.G9472 Trifolium pratense HOM05D005251 ORTHO05D006680 1.1e-131 474.2 427 62.5
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea HOM05D005251 ORTHO05D006680 3.2e-131 472.6 406 65.5
Lj4g0006207 Lotus japonicus HOM05D005251 ORTHO05D006680 7.1e-131 471.5 429 63.4
Nn8g38856 Nelumbo nucifera HOM05D005251 ORTHO05D006680 1.2e-130 470.7 430 61.2
Duzib150G0576 Durio zibethinus HOM05D005251 ORTHO05D006680 3.5e-130 469.2 373 67.6
Phvul.003G136700 Phaseolus vulgaris HOM05D005251 ORTHO05D006680 1.8e-129 466.8 406 64.0
QL02p062545 Quercus lobata HOM05D005251 ORTHO05D006680 6.7e-129 464.9 386 65.5
Sopen12g003800 Solanum pennellii HOM05D005251 ORTHO05D006680 5.6e-128 461.8 355 72.1
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 1.6e-127 460.3 424 62.7
MD15G1207600 Malus domestica HOM05D005251 ORTHO05D006680 1.6e-127 460.3 423 57.2
Atru.chr7.1595 Acer truncatum HOM05D005251 ORTHO05D006680 8.1e-127 458.0 360 70.6
Sabra06G0120400 Salix brachista HOM05D005251 ORTHO05D006680 8.1e-127 458.0 430 60.9
Solyc12g008870.1 Solanum lycopersicum HOM05D005251 ORTHO05D006680 4.0e-126 455.7 355 72.1
THA.LOC104817759 Tarenaya hassleriana HOM05D005251 ORTHO05D006680 4.0e-126 455.7 426 59.9
MBI04_g31157_MAGBIO Magnolia biondii HOM05D005251 ORTHO05D006680 2.6e-125 453.0 431 58.5
VMungo1215G2738 Vigna mungo HOM05D005251 ORTHO05D006680 7.6e-125 451.4 406 62.3
Nitab4.5_0000540g0310 Nicotiana tabacum HOM05D005251 ORTHO05D006680 1.3e-124 450.7 355 65.6
PSO210G7113 Papaver somniferum HOM05D005251 ORTHO05D006680 1.3e-124 450.7 424 58.7
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 2.9e-124 449.5 402 63.2
BcaB08g36046 Brassica carinata HOM05D005251 ORTHO05D006680 1.1e-123 447.6 420 61.0
PSO210G1153 Papaver somniferum HOM05D005251 ORTHO05D006680 1.4e-123 447.2 424 58.5
A10p14170 Brassica napus HOM05D005251 ORTHO05D006680 3.2e-123 446.0 420 60.5
Sp6g18620 Schrenkiella parvula HOM05D005251 ORTHO05D006680 3.2e-123 446.0 404 61.4
BcaC04g20043 Brassica carinata HOM05D005251 ORTHO05D006680 7.1e-123 444.9 404 61.9
C09p48540 Brassica napus HOM05D005251 ORTHO05D006680 7.1e-123 444.9 404 61.9
BolC9t57695H Brassica oleracea HOM05D005251 ORTHO05D006680 7.1e-123 444.9 404 61.9
BraA10t43510Z Brassica rapa HOM05D005251 ORTHO05D006680 7.1e-123 444.9 420 60.2
AL8G32750 Arabidopsis lyrata HOM05D005251 ORTHO05D006680 6.0e-122 441.8 404 61.9
Aa31LG3G12780 Aethionema arabicum HOM05D005251 ORTHO05D006680 1.0e-121 441.0 429 59.7
AT5G56900 Arabidopsis thaliana HOM05D005251 ORTHO05D006680 1.0e-121 441.0 404 61.9
Carub.0008s1736 Capsella rubella HOM05D005251 ORTHO05D006680 8.7e-121 438.0 404 61.4
CARHR270650 Cardamine hirsuta HOM05D005251 ORTHO05D006680 1.9e-120 436.8 404 60.6
Thhalv10013022m.g Eutrema salsugineum HOM05D005251 ORTHO05D006680 2.5e-120 436.4 404 60.6
Aqoxy7G04044 Aquilegia oxysepala HOM05D005251 ORTHO05D006680 1.1e-118 431.0 408 59.6
Os09g0364000 Oryza sativa ssp. japonica HOM05D005251 ORTHO05D006680 1.1e-118 431.0 422 58.1
unitig_8.g4690 Utricularia gibba HOM05D005251 ORTHO05D006680 5.8e-117 425.2 373 65.4
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 7.1e-115 418.3 366 65.0
Sc18g0002110 Simmondsia chinensis HOM05D005251 ORTHO05D006680 2.3e-105 386.7 355 62.3
Glyma.17G054700 Glycine max HOM05D005251 ORTHO05D006680 1.1e-102 377.9 331 65.6
Psat4g015200 Pisum sativum HOM05D005251 ORTHO05D006680 5.0e-100 369.0 334 64.4
Sed0019984 Sechium edule HOM05D005251 ORTHO05D006680 3.0e-97 359.8 304 66.1
Nitab4.5_0008523g0050 Nicotiana tabacum HOM05D005251 ORTHO05D006680 3.3e-96 356.3 400 50.2
Zm00001eb311020 Zea mays HOM05D005251 ORTHO05D006680 7.0e-94 348.6 353 57.8
Pp3c16_14300 Physcomitrium patens HOM05D005251 ORTHO05D006680 9.7e-88 328.2 457 43.8
SMO273G0018 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 4.7e-82 309.3 447 43.8
SMO147G0126 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 1.8e-81 307.4 447 43.8
ATR0789G159 Amborella trichopoda HOM05D005251 ORTHO05D006680 2.8e-79 300.1 365 51.0
Mapoly0009s0116 Marchantia polymorpha HOM05D005251 ORTHO05D006680 3.8e-76 289.7 461 42.3
HPP92_009144 Vanilla planifolia HOM05D005251 ORTHO05D006680 1.8e-49 201.1 215 47.4
SEGI_26696 Sequoiadendron giganteum HOM05D005251 ORTHO05D006680 1.3e-47 194.9 296 45.6
arahy.Tifrunner.gnm1.ann1.BFBS1X Arachis hypogaea HOM05D005251 ORTHO05D006680 3.7e-47 193.4 176 56.2
CBR_g54012 Chara braunii HOM05D005251 ORTHO05D006680 8.3e-47 192.2 524 30.7
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis HOM05D005251 ORTHO05D006680 3.0e-44 183.7 412 31.1
VMungo1383G3543 Vigna mungo HOM05D005251 ORTHO05D006680 5.2e-41 172.9 234 45.3
MCO07G467 Micromonas commoda HOM05D005251 ORTHO05D006680 2.1e-34 151.0 406 28.8
Solyc05g032650.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 3.6e-34 150.2 137 55.5
Sopen05g023240 Solanum pennellii HOM05D005251 ORTHO05D006680 3.1e-33 147.1 93 75.3
PRCOL_00000275 Prasinoderma coloniale HOM05D005251 ORTHO05D006680 2.6e-32 144.1 482 27.4
Cre07.g338900 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 6.9e-25 119.4 478 24.7
vmacro17238 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 2.1e-21 107.8 242 33.5
Duzib168G1322 Durio zibethinus HOM05D005251 ORTHO05D006680 3.5e-21 107.1 182 37.9
CANSAT11G0466 Cannabis sativa HOM05D003636 ORTHO05D005160 1.2e-16 92.0 222 25.2
HPP92_018388 Vanilla planifolia HOM05D003636 ORTHO05D005160 3.2e-14 84.0 213 25.4
Glyma.20G126100 Glycine max HOM05D003636 ORTHO05D005160 4.2e-14 83.6 222 25.2
CARHR289840 Cardamine hirsuta HOM05D003636 ORTHO05D005160 5.5e-14 83.2 227 25.1
Pp3c6_28790 Physcomitrium patens HOM05D003636 ORTHO05D005160 2.7e-13 80.9 221 26.2
Glyma.10G264200 Glycine max HOM05D003636 ORTHO05D005160 6.0e-13 79.7 326 23.3
Lalb_Chr21g0308481 Lupinus albus HOM05D003636 ORTHO05D005160 6.0e-13 79.7 222 25.2
Lj2g0003499 Lotus japonicus HOM05D003636 ORTHO05D005160 1.0e-12 79.0 222 26.6
Medtr1g107575 Medicago truncatula HOM05D003636 ORTHO05D005160 1.0e-12 79.0 222 24.8
CBR_g41119 Chara braunii HOM05D003636 ORTHO05D005160 3.0e-12 77.4 229 26.2
EL10Ac2g03737 Beta vulgaris HOM05D003636 ORTHO05D005160 5.1e-12 76.6 241 24.5
SGA_v2.0_scaffold101G29798 Striga asiatica HOM05D003636 ORTHO05D005160 2.5e-11 74.3 222 23.4
Cre17.g741550 Chlamydomonas reinhardtii HOM05D003636 ORTHO05D005160 3.3e-11 73.9 186 27.4
Mapoly0080s0020 Marchantia polymorpha HOM05D003636 ORTHO05D005160 4.3e-11 73.6 194 24.2
EL10Ac2g04633 Beta vulgaris HOM05D003636 ORTHO05D005160 7.4e-11 72.8 240 22.1
Nitab4.5_0000540g0330 Nicotiana tabacum HOM05D005251 ORTHO05D006680 2.8e-10 70.9 71 46.5
AUR62039385 Chenopodium quinoa HOM05D003636 ORTHO05D005160 3.7e-10 70.5 224 22.8
SMO356G0642 Selaginella moellendorffii HOM05D003636 ORTHO05D005160 8.1e-10 69.3 231 23.4
MCO13G162 Micromonas commoda HOM05D003636 ORTHO05D005160 6.9e-09 66.2 201 25.4
Haze_21469 Corylus avellana HOM05D003636 ORTHO05D005160 4.5e-08 63.5 253 22.5
Cre07.g338800 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 2.2e-07 61.2 158 26.6
Actinidia25250 Actinidia chinensis HOM05D005251 ORTHO05D006680 3.8e-07 60.5 41 70.7
Cre07.g338700 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 6.5e-07 59.7 157 26.1


User provided reference genes

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