Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09337 Striga asiatica HOM05D000761 ORTHO05D402058 4.9e-163 578.2 395 100.0
TPR.G27341 Trifolium pratense HOM05D000761 ORTHO05D001062 6.9e-08 62.8 99 41.4
TWI38G1474 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 9.1e-08 62.4 99 38.4
TWI38G1255 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 2.6e-07 60.8 80 42.5
Gohir.A09G074400 Gossypium hirsutum HOM05D000761 ORTHO05D001062 5.9e-07 59.7 83 43.4
Gohir.D09G074200 Gossypium hirsutum HOM05D000761 ORTHO05D001062 5.9e-07 59.7 83 43.4
Gorai.006G089100 Gossypium raimondii HOM05D000761 ORTHO05D001062 5.9e-07 59.7 83 43.4
TWI63G0610 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 7.7e-07 59.3 80 43.8
Glyma.15G083800 Glycine max HOM05D000761 ORTHO05D001062 1.3e-06 58.5 103 39.8
VMungo0540G2382 Vigna mungo HOM05D000761 ORTHO05D001062 1.3e-06 58.5 80 43.8
GSVIVG01032772001 Vitis vinifera HOM05D000761 ORTHO05D001062 1.7e-06 58.2 101 35.6
Rhsim13G0189500 Rhododendron simsii HOM05D000761 ORTHO05D001062 2.9e-06 57.4 83 39.8
Lalb_Chr12g0205071 Lupinus albus HOM05D000761 ORTHO05D001062 3.8e-06 57.0 79 40.5
Lalb_Chr13g0295161 Lupinus albus HOM05D000761 ORTHO05D001062 3.8e-06 57.0 79 43.0
Gorai.010G241800 Gossypium raimondii HOM05D000761 ORTHO05D001062 5.0e-06 56.6 98 39.8
Lalb_Chr18g0054591 Lupinus albus HOM05D000761 ORTHO05D001062 5.0e-06 56.6 100 41.0
Glyma.13G228700 Glycine max HOM05D000761 ORTHO05D001062 6.5e-06 56.2 101 38.6
Medtr2g016320 Medicago truncatula HOM05D000761 ORTHO05D001062 6.5e-06 56.2 110 38.2
Medtr2g016360 Medicago truncatula HOM05D000761 ORTHO05D001062 6.5e-06 56.2 110 38.2
Potri.004G058100 Populus trichocarpa HOM05D000761 ORTHO05D001062 6.5e-06 56.2 80 38.8
Potri.011G067400 Populus trichocarpa HOM05D000761 ORTHO05D001062 6.5e-06 56.2 105 36.2
QL05p047732 Quercus lobata HOM05D000761 ORTHO05D001062 6.5e-06 56.2 99 39.4
arahy.Tifrunner.gnm1.ann1.KZTX3E Arachis hypogaea HOM05D000761 ORTHO05D001062 8.5e-06 55.8 99 39.4
A10p28920 Brassica napus HOM05D000761 ORTHO05D006380 8.5e-06 55.8 109 35.8
C09p69270 Brassica napus HOM05D000761 ORTHO05D006380 8.5e-06 55.8 109 35.8
BolC9t59671H Brassica oleracea HOM05D000761 ORTHO05D006380 8.5e-06 55.8 109 35.8
BraA10t44939Z Brassica rapa HOM05D000761 ORTHO05D006380 8.5e-06 55.8 109 35.8
CiPaw.09G070700 Carya illinoinensis HOM05D000761 ORTHO05D001062 8.5e-06 55.8 98 36.7


User provided reference genes

Program Settings