Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 1.2e-155 553.1 279 100.0
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 3.6e-67 259.2 246 56.9
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 2.2e-64 250.0 252 54.0
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 3.6e-59 232.6 255 51.4
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 5.9e-46 188.7 253 45.8
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 2.9e-45 186.4 244 44.7
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 5.0e-45 185.7 252 44.8
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 5.0e-45 185.7 242 46.3
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 5.0e-45 185.7 262 42.0
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 5.0e-45 185.7 249 43.4
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 6.5e-45 185.3 250 43.6
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 8.6e-45 184.9 251 42.6
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 1.1e-44 184.5 252 42.1
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 1.9e-44 183.7 247 42.9
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 2.5e-44 183.3 252 43.3
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 7.2e-44 181.8 250 42.8
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 1.2e-43 181.0 208 49.0
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 2.1e-43 180.3 247 42.9
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 8.8e-42 174.9 243 42.4
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 1.2e-41 174.5 251 43.0
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 1.5e-41 174.1 243 39.9
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 3.4e-41 172.9 259 42.5
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 5.7e-41 172.2 248 41.1
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 2.8e-40 169.9 250 42.4
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 2.8e-40 169.9 258 41.5
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 4.9e-40 169.1 271 37.6
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 4.9e-40 169.1 250 40.8
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 6.3e-40 168.7 248 39.9
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 8.3e-40 168.3 251 39.4
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 1.8e-39 167.2 265 38.1
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 2.4e-39 166.8 277 37.9
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 2.4e-39 166.8 265 38.1
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 5.4e-39 165.6 251 39.0
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 7.0e-39 165.2 251 37.8
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 1.2e-38 164.5 254 42.5
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 2.7e-38 163.3 253 39.9
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 4.5e-38 162.5 243 41.6
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 5.9e-38 162.2 251 39.8
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 2.3e-37 160.2 268 38.1
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 6.6e-37 158.7 251 40.6
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 1.9e-36 157.1 264 36.0
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 1.9e-36 157.1 258 37.6
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 7.3e-36 155.2 248 39.5
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 1.6e-35 154.1 262 37.4
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 1.6e-35 154.1 265 37.4
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 2.1e-35 153.7 264 37.5
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 1.0e-34 151.4 235 39.1
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 4.0e-34 149.4 174 48.9
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 6.8e-34 148.7 217 40.6
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 3.4e-33 146.4 263 38.4
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 1.3e-32 144.4 262 38.9
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 1.3e-32 144.4 260 37.3
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.3e-32 141.7 251 37.5
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 8.3e-32 141.7 268 35.1
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 1.1e-31 141.4 250 38.4
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 9.2e-31 138.3 250 38.0
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.6e-30 137.5 262 37.8
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 2.0e-30 137.1 249 37.3
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 3.5e-30 136.3 213 41.8
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 4.6e-30 136.0 245 38.0
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.8e-30 135.2 251 36.7
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 1.7e-29 134.0 260 33.1
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 1.5e-28 131.0 274 33.9
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 2.3e-26 123.6 259 34.0
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.1e-26 123.2 241 36.5
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 5.2e-26 122.5 249 34.5
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 6.8e-26 122.1 251 33.5
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.9e-24 115.9 207 37.2
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 6.4e-24 115.5 235 35.3
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 5.4e-23 112.5 183 36.1
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 2.7e-22 110.2 140 47.1
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 3.5e-22 109.8 268 32.5
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 2.3e-21 107.1 218 33.9
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 5.6e-20 102.4 254 31.5
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 9.5e-20 101.7 253 32.0
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 4.7e-19 99.4 188 35.1
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 1.4e-18 97.8 252 30.6
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 1.8e-18 97.4 268 33.2
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 2.3e-18 97.1 184 37.0
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 3.1e-18 96.7 252 31.3
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 5.2e-18 95.9 252 29.8
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 6.8e-18 95.5 259 31.3
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 8.9e-18 95.1 105 47.6
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 1.3e-16 91.3 269 31.2
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 2.2e-16 90.5 231 31.2
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 1.9e-15 87.4 97 47.4
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 2.7e-14 83.6 128 41.4
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 5.1e-13 79.3 127 37.8
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 2.5e-12 77.0 101 37.6
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 2.8e-11 73.6 132 41.7
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 8.1e-11 72.0 258 26.7
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 8.1e-11 72.0 138 37.0
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 5.2e-10 69.3 80 46.2
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 1.2e-09 68.2 184 32.1
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 2.0e-09 67.4 267 25.1
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 7.6e-09 65.5 165 26.7
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 2.9e-08 63.5 77 42.9
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 3.8e-08 63.2 78 46.2
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 4.9e-08 62.8 255 25.5
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.9e-08 62.8 249 25.3
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 1.9e-07 60.8 251 26.7
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 3.2e-07 60.1 251 26.3
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 4.1e-07 59.7 255 25.9
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 4.1e-07 59.7 255 25.9
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 7.1e-07 58.9 256 26.6
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 7.1e-07 58.9 273 24.2
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 1.2e-06 58.2 72 44.4
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 1.6e-06 57.8 252 27.0
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 1.6e-06 57.8 252 27.0
SEGI_22599 Sequoiadendron giganteum HOM05D007529 ORTHO05D007451 1.6e-06 57.8 248 25.4
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 3.5e-06 56.6 255 25.1
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.6e-06 56.2 252 24.6
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 7.8e-06 55.5 260 24.2


User provided reference genes

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