Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold219G42554 Striga asiatica HOM05D004984 ORTHO05D006508 2.0e-269 931.8 461 100.0
Cc02_g20610 Coffea canephora HOM05D004984 ORTHO05D006508 3.4e-208 728.4 450 78.4
Dinv16030 Davidia involucrata HOM05D004984 ORTHO05D006508 6.5e-207 724.2 458 79.3
Oeu059891.1 Olea europaea HOM05D004984 ORTHO05D006508 3.2e-206 721.8 456 78.7
SalBow6G5880 Salvia bowleyana HOM05D004984 ORTHO05D006508 7.2e-206 720.7 455 77.6
MSTRG.23114 Avicennia marina HOM05D004984 ORTHO05D006508 9.3e-206 720.3 455 80.0
Dinv08970 Davidia involucrata HOM05D004984 ORTHO05D006508 2.7e-205 718.8 458 77.7
Migut.B00524 Erythranthe guttata HOM05D004984 ORTHO05D006508 1.0e-204 716.8 455 78.7
Peaxi162Scf00152g00730 Petunia axillaris HOM05D004984 ORTHO05D006508 3.9e-204 714.9 445 77.8
PGSC0003DMG402029578 Solanum tuberosum HOM05D004984 ORTHO05D006508 3.9e-204 714.9 456 76.1
CAN.G908.9 Capsicum annuum HOM05D004984 ORTHO05D006508 5.7e-203 711.1 459 75.8
Thecc.02G125200 Theobroma cacao HOM05D004984 ORTHO05D006508 5.7e-203 711.1 431 80.7
Atru.chr6.1348 Acer truncatum HOM05D004984 ORTHO05D006508 6.3e-202 707.6 432 79.9
Sopen08g022650 Solanum pennellii HOM05D004984 ORTHO05D006508 1.8e-201 706.1 422 80.1
Hma1.2p1_0435F.1_g152620 Hydrangea macrophylla HOM05D004984 ORTHO05D006508 1.5e-200 703.0 459 75.8
Lj5A225T68 Lonicera japonica HOM05D004984 ORTHO05D006508 2.6e-200 702.2 452 77.4
RcHm_v2.0_Chr6g0269501 Rosa chinensis HOM05D004984 ORTHO05D006508 7.7e-200 700.7 449 77.5
CSS0038067 Camellia sinensis var. sinensis HOM05D004984 ORTHO05D006508 2.9e-199 698.7 453 75.9
Lsat_1_v5_gn_5_110941 Lactuca sativa HOM05D004984 ORTHO05D006508 3.8e-199 698.4 423 79.0
MD10G1056700 Malus domestica HOM05D004984 ORTHO05D006508 3.8e-199 698.4 436 78.2
HanXRQChr10g0291211 Helianthus annuus HOM05D004984 ORTHO05D006508 6.5e-199 697.6 423 78.7
Prupe.8G074900 Prunus persica HOM05D004984 ORTHO05D006508 8.5e-199 697.2 449 76.8
MELO3C018046.2 Cucumis melo HOM05D004984 ORTHO05D006508 1.1e-198 696.8 423 80.1
Gohir.A03G178800 Gossypium hirsutum HOM05D004984 ORTHO05D006508 1.9e-198 696.0 428 79.2
Gorai.005G227400 Gossypium raimondii HOM05D004984 ORTHO05D006508 2.5e-198 695.7 428 79.0
MD05G1049600 Malus domestica HOM05D004984 ORTHO05D006508 3.2e-198 695.3 447 77.4
Gohir.D02G202500 Gossypium hirsutum HOM05D004984 ORTHO05D006508 4.2e-198 694.9 428 79.0
CsaV3_4G014670 Cucumis sativus L. HOM05D004984 ORTHO05D006508 5.5e-198 694.5 423 79.9
Duzib132G1162 Durio zibethinus HOM05D004984 ORTHO05D006508 5.5e-198 694.5 426 79.3
THA.LOC104808837 Tarenaya hassleriana HOM05D004984 ORTHO05D006508 7.2e-198 694.1 422 79.6
ECA234G3445 Erigeron canadensis HOM05D004984 ORTHO05D006508 9.4e-198 693.7 423 78.3
QL11p026578 Quercus lobata HOM05D004984 ORTHO05D006508 9.4e-198 693.7 448 75.7
ClCG10G009790 Citrullus lanatus HOM05D004984 ORTHO05D006508 1.2e-197 693.3 465 74.4
FvH4_2g11180 Fragaria vesca HOM05D004984 ORTHO05D006508 1.2e-197 693.3 447 77.6
GSVIVG01038516001 Vitis vinifera HOM05D004984 ORTHO05D006508 1.2e-197 693.3 444 77.9
FAN20G2814 Fragaria x ananassa HOM05D004984 ORTHO05D006508 2.7e-197 692.2 458 76.0
FAN27G1475 Fragaria x ananassa HOM05D004984 ORTHO05D006508 2.7e-197 692.2 447 77.6
BcaB06g26775 Brassica carinata HOM05D004984 ORTHO05D006508 7.9e-197 690.6 444 77.3
FAN15G1055 Fragaria x ananassa HOM05D004984 ORTHO05D006508 1.4e-196 689.9 458 75.3
Thhalv10002529m.g Eutrema salsugineum HOM05D004984 ORTHO05D006508 5.1e-196 688.0 423 79.4
Duzib052G0292 Durio zibethinus HOM05D004984 ORTHO05D006508 1.1e-195 686.8 428 78.3
Sed0007187 Sechium edule HOM05D004984 ORTHO05D006508 1.1e-195 686.8 460 74.8
TAR381G0604 Trochodendron aralioides HOM05D004984 ORTHO05D006508 1.1e-195 686.8 441 76.2
Aa31sc202G40 Aethionema arabicum HOM05D004984 ORTHO05D006508 1.5e-195 686.4 422 79.9
C07p10310 Brassica napus HOM05D004984 ORTHO05D006508 1.5e-195 686.4 444 76.8
BraA07t28467Z Brassica rapa HOM05D004984 ORTHO05D006508 1.5e-195 686.4 444 76.8
BcaC06g35862 Brassica carinata HOM05D004984 ORTHO05D006508 2.0e-195 686.0 444 76.8
BolC7t41481H Brassica oleracea HOM05D004984 ORTHO05D006508 2.0e-195 686.0 444 76.8
Sp6g01600 Schrenkiella parvula HOM05D004984 ORTHO05D006508 2.0e-195 686.0 446 76.5
Eucgr.I02584 Eucalyptus grandis HOM05D004984 ORTHO05D006508 3.3e-195 685.3 447 75.2
Gohir.A04G116400 Gossypium hirsutum HOM05D004984 ORTHO05D006508 3.3e-195 685.3 445 75.5
AL3G42000 Arabidopsis lyrata HOM05D004984 ORTHO05D006508 5.7e-195 684.5 448 76.3
A07p06740 Brassica napus HOM05D004984 ORTHO05D006508 5.7e-195 684.5 444 76.6
Actinidia02410 Actinidia chinensis HOM05D004984 ORTHO05D006508 9.7e-195 683.7 455 74.7
Gohir.D04G158100 Gossypium hirsutum HOM05D004984 ORTHO05D006508 1.7e-194 682.9 422 78.0
vmacro01898 Vaccinium macrocarpon HOM05D004984 ORTHO05D006508 1.7e-194 682.9 437 76.4
vmacro23356 Vaccinium macrocarpon HOM05D004984 ORTHO05D006508 1.7e-194 682.9 437 76.4
HanXRQChr01g0009891 Helianthus annuus HOM05D004984 ORTHO05D006508 2.8e-194 682.2 423 77.8
CARHR102180 Cardamine hirsuta HOM05D004984 ORTHO05D006508 6.3e-194 681.0 423 79.4
THA.LOC104815368 Tarenaya hassleriana HOM05D004984 ORTHO05D006508 8.2e-194 680.6 446 75.6
TAR376G0949 Trochodendron aralioides HOM05D004984 ORTHO05D006508 1.1e-193 680.2 444 75.7
Ciclev10028425m.g Citrus clementina HOM05D004984 ORTHO05D006508 1.4e-193 679.9 458 74.2
Gorai.012G145500 Gossypium raimondii HOM05D004984 ORTHO05D006508 4.1e-193 678.3 422 77.7
CiPaw.05G027100 Carya illinoinensis HOM05D004984 ORTHO05D006508 5.3e-193 677.9 453 75.1
PGR142G0200 Punica granatum HOM05D004984 ORTHO05D006508 5.3e-193 677.9 459 73.6
Lsat_1_v5_gn_7_82880 Lactuca sativa HOM05D004984 ORTHO05D006508 1.5e-192 676.4 439 75.6
Sed0006594 Sechium edule HOM05D004984 ORTHO05D006508 2.6e-192 675.6 407 79.6
Carub.0003s2601 Capsella rubella HOM05D004984 ORTHO05D006508 7.7e-192 674.1 423 78.5
TAR625G1028 Trochodendron aralioides HOM05D004984 ORTHO05D006508 1.3e-191 673.3 459 73.2
DCAR_029278 Daucus carota HOM05D004984 ORTHO05D006508 3.8e-191 671.8 423 78.3
ATR0800G083 Amborella trichopoda HOM05D004984 ORTHO05D006508 1.1e-190 670.2 426 75.8
PSO541G0041 Papaver somniferum HOM05D004984 ORTHO05D006508 3.2e-190 668.7 425 76.7
PSO532G0022 Papaver somniferum HOM05D004984 ORTHO05D006508 9.4e-190 667.2 425 76.5
Oeu010515.3 Olea europaea HOM05D004984 ORTHO05D006508 2.7e-189 665.6 573 62.5
Hund00395 Selenicereus undatus HOM05D004984 ORTHO05D006508 4.7e-189 664.8 458 73.1
Nn1g05667 Nelumbo nucifera HOM05D004984 ORTHO05D006508 6.1e-189 664.5 424 76.9
Manes.07G046600 Manihot esculenta HOM05D004984 ORTHO05D006508 2.3e-188 662.5 448 71.9
Aqoxy6G00646 Aquilegia oxysepala HOM05D004984 ORTHO05D006508 3.0e-188 662.1 423 74.9
Potri.009G079600 Populus trichocarpa HOM05D004984 ORTHO05D006508 1.1e-187 660.2 451 71.2
Potri.001G285300 Populus trichocarpa HOM05D004984 ORTHO05D006508 2.6e-187 659.1 446 71.7
SGA_v2.0_scaffold32G12944 Striga asiatica HOM05D004984 ORTHO05D006508 3.3e-187 658.7 494 69.6
TWI14G0615 Tripterygium wilfordii HOM05D004984 ORTHO05D006508 1.8e-185 652.9 456 70.8
Ca_00179_v3 Cicer arietinum L. HOM05D004984 ORTHO05D006508 7.0e-185 651.0 454 72.5
Psat1g212920 Pisum sativum HOM05D004984 ORTHO05D006508 7.0e-185 651.0 439 74.0
VMungo0540G0195 Vigna mungo HOM05D004984 ORTHO05D006508 7.0e-185 651.0 434 74.2
CDE06G1646 Ceratophyllum demersum HOM05D004984 ORTHO05D006508 3.5e-184 648.7 458 69.4
Sabra09G0061600 Salix brachista HOM05D004984 ORTHO05D006508 3.5e-184 648.7 470 68.3
Gohir.D13G048100 Gossypium hirsutum HOM05D004984 ORTHO05D006508 1.0e-183 647.1 408 75.5
Gorai.013G053700 Gossypium raimondii HOM05D004984 ORTHO05D006508 1.0e-183 647.1 408 75.5
Nitab4.5_0006251g0010 Nicotiana tabacum HOM05D004984 ORTHO05D006508 1.0e-183 647.1 459 71.7
Lj6g0001628 Lotus japonicus HOM05D004984 ORTHO05D006508 5.0e-183 644.8 432 74.1
Gohir.A13G049600 Gossypium hirsutum HOM05D004984 ORTHO05D006508 1.9e-182 642.9 445 70.6
TPR.G32658 Trifolium pratense HOM05D004984 ORTHO05D006508 4.2e-182 641.7 434 74.2
AT2G04305 Arabidopsis thaliana HOM05D004984 ORTHO05D006508 7.2e-182 641.0 448 71.9
EL10Ac9g22123 Beta vulgaris HOM05D004984 ORTHO05D006508 9.4e-182 640.6 463 69.8
Glyma.13G254800 Glycine max HOM05D004984 ORTHO05D006508 2.7e-181 639.0 432 74.5
Medtr2g010000 Medicago truncatula HOM05D004984 ORTHO05D006508 2.7e-181 639.0 434 73.7
unitig_744.g24196 Utricularia gibba HOM05D004984 ORTHO05D006508 4.7e-181 638.3 459 67.8
Glyma.15G060000 Glycine max HOM05D004984 ORTHO05D006508 8.0e-181 637.5 434 74.2
Sopen10g018750 Solanum pennellii HOM05D004984 ORTHO05D006508 5.2e-180 634.8 457 68.3
Phvul.006G199900 Phaseolus vulgaris HOM05D004984 ORTHO05D006508 3.3e-179 632.1 434 71.9
AUR62027083 Chenopodium quinoa HOM05D004984 ORTHO05D006508 9.7e-179 630.6 440 71.6
Solyc10g047820.1 Solanum lycopersicum HOM05D004984 ORTHO05D006508 9.7e-179 630.6 458 67.9
Peaxi162Scf00003g03028 Petunia axillaris HOM05D004984 ORTHO05D006508 1.7e-178 629.8 421 71.0
TWI59G1371 Tripterygium wilfordii HOM05D004984 ORTHO05D006508 3.7e-178 628.6 457 67.8
Lalb_Chr15g0090281 Lupinus albus HOM05D004984 ORTHO05D006508 8.2e-178 627.5 436 72.2
PGSC0003DMG400004399 Solanum tuberosum HOM05D004984 ORTHO05D006508 2.4e-177 625.9 457 68.1
ECA236G3860 Erigeron canadensis HOM05D004984 ORTHO05D006508 5.3e-177 624.8 396 77.0
DCAR_021894 Daucus carota HOM05D004984 ORTHO05D006508 2.0e-176 622.9 423 72.1
Nn5g29788 Nelumbo nucifera HOM05D004984 ORTHO05D006508 3.5e-176 622.1 439 71.1
AUR62030922 Chenopodium quinoa HOM05D004984 ORTHO05D006508 7.7e-176 620.9 432 71.3
CiPaw.06G160700 Carya illinoinensis HOM05D004984 ORTHO05D006508 2.9e-175 619.0 448 69.4
HPP92_019493 Vanilla planifolia HOM05D004984 ORTHO05D006508 1.2e-171 607.1 424 69.1
SalBow6G7210 Salvia bowleyana HOM05D004984 ORTHO05D006508 2.8e-170 602.4 423 72.1
SEGI_07926 Sequoiadendron giganteum HOM05D004984 ORTHO05D006508 9.1e-169 597.4 453 66.4
MBI16_g10445_MAGBIO Magnolia biondii HOM05D004984 ORTHO05D006508 1.2e-165 587.0 407 69.3
Sabra16G0177800 Salix brachista HOM05D004984 ORTHO05D006508 1.2e-165 587.0 453 64.5
Nitab4.5_0004008g0090 Nicotiana tabacum HOM05D004984 ORTHO05D006508 4.7e-165 585.1 443 65.0
Solyc08g069000.4 Solanum lycopersicum HOM05D004984 ORTHO05D006508 1.2e-157 560.5 373 75.3
HPP92_016673 Vanilla planifolia HOM05D004984 ORTHO05D006508 7.5e-155 551.2 403 66.5
Actinidia00320 Actinidia chinensis HOM05D004984 ORTHO05D006508 2.3e-151 539.7 453 64.2
unitig_0.g892 Utricularia gibba HOM05D000062 ORTHO05D000043 5.2e-148 528.5 336 76.5
Hma1.2p1_0383F.1_g140540 Hydrangea macrophylla HOM05D004984 ORTHO05D006508 1.2e-147 527.3 401 67.1
Mapoly0036s0130 Marchantia polymorpha HOM05D004984 ORTHO05D006508 2.6e-147 526.2 438 60.0
Ah.01g007220 Amaranthus hybridus HOM05D004984 ORTHO05D006508 3.4e-147 525.8 358 74.0
Nitab4.5_0000088g0020 Nicotiana tabacum HOM05D004984 ORTHO05D006508 2.3e-143 513.1 457 60.4
Pp3c15_5630 Physcomitrium patens HOM05D004984 ORTHO05D006508 1.5e-139 500.4 414 62.3
Os08g0130000 Oryza sativa ssp. japonica HOM05D004984 ORTHO05D006508 1.7e-138 496.9 437 58.1
Pp3c9_6010 Physcomitrium patens HOM05D004984 ORTHO05D006508 2.2e-138 496.5 411 62.5
AagrBONN_evm.TU.Sc2ySwM_368.1921 Anthoceros agrestis HOM05D004984 ORTHO05D006508 7.1e-137 491.5 422 59.5
MBI16_g43037_MAGBIO Magnolia biondii HOM05D004984 ORTHO05D006508 1.7e-135 486.9 336 68.8
Cpa.g.sc20.35 Carica papaya HOM05D004984 ORTHO05D006508 1.2e-125 454.1 303 70.3
CDE04G0284 Ceratophyllum demersum HOM05D004984 ORTHO05D006508 5.2e-124 448.7 396 58.8
Nitab4.5_0002290g0050 Nicotiana tabacum HOM05D004984 ORTHO05D006508 4.8e-109 399.1 332 61.4
MBI16_g42150_MAGBIO Magnolia biondii HOM05D004984 ORTHO05D006508 5.8e-99 365.5 292 61.3
Zm00001eb173240 Zea mays HOM05D004984 ORTHO05D006508 3.4e-91 339.7 258 66.7
Cpa.g.sc20.38 Carica papaya HOM05D004984 ORTHO05D006508 5.1e-87 325.9 212 75.9
Haze_10397 Corylus avellana HOM05D004984 ORTHO05D006508 1.9e-86 323.9 208 75.5
Lalb_Chr18g0060331 Lupinus albus HOM05D004984 ORTHO05D006508 9.1e-84 315.1 232 68.5
MBI16_g10446_MAGBIO Magnolia biondii HOM05D004984 ORTHO05D243960 1.4e-81 307.8 452 42.0
Lalb_Chr18g0060321 Lupinus albus HOM05D004984 ORTHO05D006508 2.5e-73 280.4 198 69.7
DCAR_029279 Daucus carota HOM05D004984 ORTHO05D006508 1.3e-66 258.1 181 70.7
HanXRQChr09g0257011 Helianthus annuus HOM05D004984 ORTHO05D029932 3.0e-55 220.3 154 71.4
Lsat_1_v5_gn_7_73760 Lactuca sativa HOM05D004984 ORTHO05D006508 1.5e-49 201.4 139 70.5
BolC3t20704H Brassica oleracea HOM05D004984 ORTHO05D040812 7.5e-38 162.5 149 55.7
MBI16_g47408_MAGBIO Magnolia biondii HOM05D004984 ORTHO05D029932 6.4e-37 159.5 212 43.4
C03p84240 Brassica napus HOM05D004984 ORTHO05D040812 1.2e-35 155.2 148 56.8
HanXRQChr14g0429701 Helianthus annuus HOM05D004984 ORTHO05D029932 4.4e-22 110.2 61 86.9
Nn4g23949 Nelumbo nucifera HOM05D004984 ORTHO05D006508 1.3e-10 72.0 56 60.7


User provided reference genes

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