Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold218G42496 Striga asiatica HOM05D005590 ORTHO05D007084 1.3e-76 289.7 148 100.0
SGA_v2.0_scaffold9G04769 Striga asiatica HOM05D005590 ORTHO05D007084 5.7e-56 221.1 117 98.3
unitig_22.g6410 Utricularia gibba HOM05D005590 ORTHO05D007084 1.6e-50 203.0 117 87.2
MSTRG.7987 Avicennia marina HOM05D005590 ORTHO05D007084 2.7e-50 202.2 117 86.3
SalBow2G1962 Salvia bowleyana HOM05D005590 ORTHO05D007084 2.3e-49 199.1 117 86.3
Migut.K00707 Erythranthe guttata HOM05D005590 ORTHO05D007084 2.0e-48 196.1 117 83.8
Cc11_g16690 Coffea canephora HOM05D005590 ORTHO05D007084 8.3e-47 190.7 117 83.8
TWI36G0819 Tripterygium wilfordii HOM05D005590 ORTHO05D007084 1.1e-46 190.3 117 82.1
TWI36G1126 Tripterygium wilfordii HOM05D005590 ORTHO05D007084 1.1e-46 190.3 117 82.1
CiPaw.05G113900 Carya illinoinensis HOM05D005590 ORTHO05D007084 2.4e-46 189.1 117 81.2
Haze_12376 Corylus avellana HOM05D005590 ORTHO05D007084 2.4e-46 189.1 117 82.1
Lj6C823G8 Lonicera japonica HOM05D005590 ORTHO05D007084 3.1e-46 188.7 117 81.2
Peaxi162Scf00128g00942 Petunia axillaris HOM05D005590 ORTHO05D007084 3.1e-46 188.7 117 80.3
TAR629G0528 Trochodendron aralioides HOM05D005590 ORTHO05D007084 3.1e-46 188.7 117 81.2
ECA234G4696 Erigeron canadensis HOM05D005590 ORTHO05D003891 4.1e-46 188.3 117 81.2
Ciclev10030703m.g Citrus clementina HOM05D005590 ORTHO05D007084 1.2e-45 186.8 117 81.2
Oeu019045.1 Olea europaea HOM05D005590 ORTHO05D007084 1.6e-45 186.4 117 79.5
QL03p054580 Quercus lobata HOM05D005590 ORTHO05D007084 1.6e-45 186.4 117 80.3
DCAR_031184 Daucus carota HOM05D005590 ORTHO05D007084 2.0e-45 186.0 117 81.2
Cpa.g.sc43.29 Carica papaya HOM05D005590 ORTHO05D007084 2.7e-45 185.7 117 82.1
Nitab4.5_0003209g0020 Nicotiana tabacum HOM05D005590 ORTHO05D007084 2.7e-45 185.7 117 78.6
Manes.13G016500 Manihot esculenta HOM05D005590 ORTHO05D007084 3.5e-45 185.3 117 77.8
Sopen05g010060 Solanum pennellii HOM05D005590 ORTHO05D007084 3.5e-45 185.3 117 79.5
PGSC0003DMG400001246 Solanum tuberosum HOM05D005590 ORTHO05D007084 3.5e-45 185.3 117 79.5
HanXRQChr12g0385371 Helianthus annuus HOM05D005590 ORTHO05D007084 4.5e-45 184.9 117 79.5
COL.COLO4_12817 Corchorus olitorius HOM05D005590 ORTHO05D007084 5.9e-45 184.5 119 79.8
Solyc05g014970.3 Solanum lycopersicum HOM05D005590 ORTHO05D007084 7.7e-45 184.1 117 78.6
THA.LOC104807889 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 7.7e-45 184.1 117 76.1
CSS0010322 Camellia sinensis var. sinensis HOM05D005590 ORTHO05D007084 1.3e-44 183.3 117 79.5
Cfa009347 Carpinus fangiana HOM05D005590 ORTHO05D007084 1.3e-44 183.3 117 80.3
HPP92_006206 Vanilla planifolia HOM05D005590 ORTHO05D007084 1.7e-44 183.0 117 77.8
Eucgr.B03469 Eucalyptus grandis HOM05D005590 ORTHO05D007084 2.3e-44 182.6 117 77.8
Zm00001eb118150 Zea mays HOM05D005590 ORTHO05D007084 2.9e-44 182.2 117 76.9
Potri.008G177900 Populus trichocarpa HOM05D005590 ORTHO05D007084 3.8e-44 181.8 117 79.5
Duzib248G1471 Durio zibethinus HOM05D005590 ORTHO05D007084 5.0e-44 181.4 117 77.8
Nn4g22391 Nelumbo nucifera HOM05D005590 ORTHO05D007084 5.0e-44 181.4 117 78.6
GSVIVG01010360001 Vitis vinifera HOM05D005590 ORTHO05D007084 6.5e-44 181.0 117 76.9
CARHR060120 Cardamine hirsuta HOM05D005590 ORTHO05D007084 8.6e-44 180.6 117 78.6
FAN22G2048 Fragaria x ananassa HOM05D005590 ORTHO05D007084 8.6e-44 180.6 118 78.8
PSO063G4664 Papaver somniferum HOM05D005590 ORTHO05D007084 1.1e-43 180.3 117 78.6
CANSAT01G0321 Cannabis sativa HOM05D005590 ORTHO05D007084 1.5e-43 179.9 117 76.9
Carub.0002s1389 Capsella rubella HOM05D005590 ORTHO05D007084 1.9e-43 179.5 117 77.8
FvH4_4g24160 Fragaria vesca HOM05D005590 ORTHO05D007084 1.9e-43 179.5 117 79.5
FAN07G0306 Fragaria x ananassa HOM05D005590 ORTHO05D007084 1.9e-43 179.5 117 79.5
Prupe.1G232300 Prunus persica HOM05D005590 ORTHO05D007084 1.9e-43 179.5 117 77.8
PGR102G0567 Punica granatum HOM05D005590 ORTHO05D007084 1.9e-43 179.5 117 76.9
FAN12G4158 Fragaria x ananassa HOM05D005590 ORTHO05D007084 2.5e-43 179.1 117 79.5
Sp5g22560 Schrenkiella parvula HOM05D005590 ORTHO05D007084 2.5e-43 179.1 117 78.6
Thecc.02G275300 Theobroma cacao HOM05D005590 ORTHO05D007084 2.5e-43 179.1 117 77.8
RcHm_v2.0_Chr4g0430931 Rosa chinensis HOM05D005590 ORTHO05D007084 3.3e-43 178.7 117 79.5
Aqoxy5G03486 Aquilegia oxysepala HOM05D005590 ORTHO05D007084 5.5e-43 177.9 117 76.1
CSS0021341 Camellia sinensis var. sinensis HOM05D005590 ORTHO05D007084 5.5e-43 177.9 117 76.9
AT1G67550 Arabidopsis thaliana HOM05D005590 ORTHO05D007084 9.5e-43 177.2 117 76.9
Hma1.2p1_1954F.1_g308890 Hydrangea macrophylla HOM05D005590 ORTHO05D007084 9.5e-43 177.2 117 77.8
Phvul.001G260000 Phaseolus vulgaris HOM05D005590 ORTHO05D007084 9.5e-43 177.2 117 78.6
CsaV3_5G030450 Cucumis sativus L. HOM05D005590 ORTHO05D007084 1.2e-42 176.8 117 76.1
Gohir.A04G138800 Gossypium hirsutum HOM05D005590 ORTHO05D007084 1.2e-42 176.8 117 76.1
Gohir.D04G181700 Gossypium hirsutum HOM05D005590 ORTHO05D007084 1.2e-42 176.8 117 76.1
Lalb_Chr19g0126761 Lupinus albus HOM05D005590 ORTHO05D007084 1.2e-42 176.8 117 77.8
ClCG11G013850 Citrullus lanatus HOM05D005590 ORTHO05D007084 1.6e-42 176.4 117 78.6
Thhalv10018120m.g Eutrema salsugineum HOM05D005590 ORTHO05D007084 1.6e-42 176.4 117 77.8
Lsat_1_v5_gn_4_2961 Lactuca sativa HOM05D005590 ORTHO05D007084 1.6e-42 176.4 106 82.1
AL2G26220 Arabidopsis lyrata HOM05D005590 ORTHO05D007084 2.1e-42 176.0 117 76.1
BraA02t06492Z Brassica rapa HOM05D005590 ORTHO05D007084 2.1e-42 176.0 117 77.8
Cfa009321 Carpinus fangiana HOM05D005590 ORTHO05D007084 2.1e-42 176.0 137 70.1
AUR62024147 Chenopodium quinoa HOM05D005590 ORTHO05D007084 2.1e-42 176.0 117 76.9
MELO3C011884.2 Cucumis melo HOM05D005590 ORTHO05D007084 2.1e-42 176.0 117 76.1
FAN17G0818 Fragaria x ananassa HOM05D005590 ORTHO05D007084 2.1e-42 176.0 117 77.8
Sabra08G0135700 Salix brachista HOM05D005590 ORTHO05D007084 2.1e-42 176.0 117 76.9
SHI17943 Sapria himalayana HOM05D005590 ORTHO05D007084 2.1e-42 176.0 117 76.9
EL10Ac6g13455 Beta vulgaris HOM05D005590 ORTHO05D007084 2.8e-42 175.6 117 76.9
BcaB05g24294 Brassica carinata HOM05D005590 ORTHO05D007084 2.8e-42 175.6 117 77.8
BcaC03g14846 Brassica carinata HOM05D005590 ORTHO05D007084 2.8e-42 175.6 117 77.8
A02p14320 Brassica napus HOM05D005590 ORTHO05D007084 2.8e-42 175.6 117 77.8
C02p23180 Brassica napus HOM05D005590 ORTHO05D007084 2.8e-42 175.6 117 77.8
BolC2t08460H Brassica oleracea HOM05D005590 ORTHO05D007084 2.8e-42 175.6 117 77.8
AUR62005583 Chenopodium quinoa HOM05D005590 ORTHO05D007084 2.8e-42 175.6 117 76.1
Aa31sc48G50 Aethionema arabicum HOM05D005590 ORTHO05D007084 3.6e-42 175.3 119 73.9
Lj6g0026097 Lotus japonicus HOM05D005590 ORTHO05D007084 3.6e-42 175.3 117 74.4
Pp3c24_5050 Physcomitrium patens HOM05D005590 ORTHO05D007084 4.7e-42 174.9 117 75.2
MD13G1115100 Malus domestica HOM05D005590 ORTHO05D007084 6.1e-42 174.5 117 77.8
VMungo1383G1779 Vigna mungo HOM05D005590 ORTHO05D007084 6.1e-42 174.5 117 75.2
arahy.Tifrunner.gnm1.ann1.F3MU0V Arachis hypogaea HOM05D005590 ORTHO05D007084 8.0e-42 174.1 117 75.2
Sed0016931 Sechium edule HOM05D005590 ORTHO05D007084 1.4e-41 173.3 117 74.4
Sc11g0000610 Simmondsia chinensis HOM05D005590 ORTHO05D007084 1.8e-41 172.9 117 73.5
Hund25444 Selenicereus undatus HOM05D005590 ORTHO05D007084 4.0e-41 171.8 117 75.2
Ah.03g133910 Amaranthus hybridus HOM05D005590 ORTHO05D007084 6.8e-41 171.0 117 75.2
Actinidia33250 Actinidia chinensis HOM05D005590 ORTHO05D007084 8.9e-41 170.6 106 81.1
Dinv10985 Davidia involucrata HOM05D005590 ORTHO05D007084 8.9e-41 170.6 106 78.3
Gorai.012G175100 Gossypium raimondii HOM05D005590 ORTHO05D007084 8.9e-41 170.6 117 74.4
TPR.G21797 Trifolium pratense HOM05D005590 ORTHO05D007084 8.9e-41 170.6 117 72.6
Ca_16478_v3 Cicer arietinum L. HOM05D005590 ORTHO05D007084 2.6e-40 169.1 117 73.5
Ca_29988_v3 Cicer arietinum L. HOM05D005590 ORTHO05D007084 2.6e-40 169.1 117 73.5
CDE08G0401 Ceratophyllum demersum HOM05D005590 ORTHO05D007084 3.4e-40 168.7 117 70.1
ATR0686G208 Amborella trichopoda HOM05D005590 ORTHO05D007084 4.4e-40 168.3 117 72.6
Psat5g098160 Pisum sativum HOM05D005590 ORTHO05D007084 5.7e-40 167.9 117 72.6
Mapoly0026s0042 Marchantia polymorpha HOM05D005590 ORTHO05D007084 9.8e-40 167.2 117 70.1
Rhsim12G0104500 Rhododendron simsii HOM05D005590 ORTHO05D007084 2.2e-39 166.0 158 58.2
Glyma.11G248700 Glycine max HOM05D005590 ORTHO05D007084 2.8e-39 165.6 117 72.6
SMO117G0108 Selaginella moellendorffii HOM05D005590 ORTHO05D007084 8.3e-39 164.1 117 72.6
vmacro16128 Vaccinium macrocarpon HOM05D005590 ORTHO05D007084 1.8e-38 162.9 153 59.5
Medtr3g085640 Medicago truncatula HOM05D005590 ORTHO05D007084 5.4e-38 161.4 117 70.1
Glyma.05G146000 Glycine max HOM05D005590 ORTHO05D007084 9.2e-38 160.6 117 69.2
MCO04G019 Micromonas commoda HOM05D005590 ORTHO05D007084 4.3e-35 151.8 121 64.5
arahy.Tifrunner.gnm1.ann1.T6FRZY Arachis hypogaea HOM05D005590 ORTHO05D007084 2.0e-32 142.9 117 67.5
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 2.9e-31 139.0 116 63.8
CBR_g46753 Chara braunii HOM05D005590 ORTHO05D007084 6.4e-31 137.9 117 63.2
MBI11_g15881_MAGBIO Magnolia biondii HOM05D005590 ORTHO05D007084 1.2e-26 123.6 82 76.8
AagrBONN_evm.TU.Sc2ySwM_344.1264 Anthoceros agrestis HOM05D005590 ORTHO05D007084 1.8e-25 119.8 110 61.8
SEGI_08905 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 1.5e-24 116.7 76 72.4
Nitab4.5_0000240g0180 Nicotiana tabacum HOM05D005590 ORTHO05D007084 3.0e-20 102.4 117 53.0
PSO782G2635 Papaver somniferum HOM05D005590 ORTHO05D007084 3.9e-20 102.1 60 80.0
Glyma.08G103032 Glycine max HOM05D005590 ORTHO05D007084 1.4e-14 83.6 67 64.2
Atru.chr11.2280 Acer truncatum HOM05D005590 ORTHO05D007084 7.3e-11 71.2 105 44.8
SEGI_03265 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 4.4e-08 62.0 42 76.2
MD16G1113700 Malus domestica HOM05D005590 ORTHO05D007084 3.8e-07 58.9 41 70.7


User provided reference genes

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