Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 4.0e-78 294.7 145 100.0
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 8.4e-52 207.2 126 84.9
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.1e-46 190.3 119 79.0
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 4.4e-45 184.9 119 73.9
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 2.2e-44 182.6 122 70.5
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 1.1e-43 180.3 122 71.3
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 1.9e-43 179.5 119 73.9
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 2.4e-43 179.1 119 73.1
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.2e-42 176.8 119 74.8
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 1.2e-42 176.8 122 68.9
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 1.6e-42 176.4 120 74.2
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 2.7e-42 175.6 119 73.1
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 2.7e-42 175.6 119 71.4
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 3.5e-42 175.3 122 69.7
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 4.6e-42 174.9 120 74.2
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.0e-41 173.7 119 71.4
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 1.0e-41 173.7 123 70.7
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 1.0e-41 173.7 119 69.7
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.7e-41 172.9 119 70.6
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 1.7e-41 172.9 122 68.9
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 2.3e-41 172.6 119 72.3
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 3.0e-41 172.2 123 69.1
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 3.0e-41 172.2 123 67.5
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 6.6e-41 171.0 119 69.7
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 1.1e-40 170.2 119 73.1
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 1.1e-40 170.2 120 72.5
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 1.5e-40 169.9 122 67.2
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 1.9e-40 169.5 120 70.8
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 2.5e-40 169.1 120 73.3
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 2.5e-40 169.1 119 68.9
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 2.5e-40 169.1 119 68.1
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 2.5e-40 169.1 119 71.4
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 4.3e-40 168.3 122 68.0
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 4.3e-40 168.3 122 68.0
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 9.6e-40 167.2 119 68.1
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 1.3e-39 166.8 122 67.2
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 1.3e-39 166.8 119 66.4
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 1.6e-39 166.4 120 69.2
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 1.6e-39 166.4 119 66.4
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 2.1e-39 166.0 123 67.5
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 2.1e-39 166.0 122 69.7
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 2.1e-39 166.0 120 68.3
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.1e-39 166.0 122 67.2
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 3.6e-39 165.2 122 68.9
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 4.8e-39 164.9 120 67.5
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 6.2e-39 164.5 119 65.5
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 6.2e-39 164.5 119 65.5
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 6.2e-39 164.5 122 69.7
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 1.1e-38 163.7 119 66.4
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.8e-38 162.9 161 55.9
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 3.1e-38 162.2 124 68.5
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 4.0e-38 161.8 120 69.2
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 4.0e-38 161.8 115 68.7
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 4.0e-38 161.8 119 67.2
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 9.0e-38 160.6 119 68.9
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 1.2e-37 160.2 119 68.9
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.2e-37 160.2 124 63.7
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 2.0e-37 159.5 119 65.5
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 2.6e-37 159.1 123 63.4
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 7.6e-37 157.5 119 67.2
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 7.6e-37 157.5 122 63.9
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 7.6e-37 157.5 122 61.5
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 9.9e-37 157.1 119 66.4
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 9.9e-37 157.1 119 62.2
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 9.9e-37 157.1 119 64.7
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.3e-36 156.8 119 68.1
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 1.3e-36 156.8 123 64.2
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 2.2e-36 156.0 119 67.2
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 3.8e-36 155.2 120 66.7
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 4.9e-36 154.8 119 63.9
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 4.9e-36 154.8 155 55.5
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 6.4e-36 154.5 119 63.0
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 6.4e-36 154.5 122 60.7
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 6.4e-36 154.5 119 66.4
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 6.4e-36 154.5 122 61.5
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 8.4e-36 154.1 126 61.9
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 8.4e-36 154.1 119 62.2
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 1.4e-35 153.3 122 61.5
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 1.9e-35 152.9 119 63.0
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 3.2e-35 152.1 122 62.3
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 3.2e-35 152.1 122 62.3
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 4.2e-35 151.8 122 59.0
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 5.4e-35 151.4 122 63.1
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 9.3e-35 150.6 133 60.2
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 2.1e-34 149.4 119 59.7
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 2.7e-34 149.1 119 64.7
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 2.7e-34 149.1 119 63.0
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 6.0e-34 147.9 122 62.3
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 6.0e-34 147.9 119 63.0
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 7.9e-34 147.5 122 62.3
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 7.9e-34 147.5 122 62.3
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 1.0e-33 147.1 119 63.0
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 1.0e-33 147.1 119 63.9
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.8e-33 146.4 122 62.3
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 2.3e-33 146.0 122 61.5
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 2.3e-33 146.0 122 61.5
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 2.3e-33 146.0 119 63.0
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 1.5e-32 143.3 116 61.2
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 4.3e-32 141.7 97 71.1
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 2.1e-31 139.4 95 70.5
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 6.2e-31 137.9 122 56.6
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 6.2e-31 137.9 119 58.0
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 6.2e-31 137.9 127 55.9
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 1.1e-30 137.1 123 57.7
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 1.2e-29 133.7 119 60.5
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 1.1e-27 127.1 119 57.1
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 2.4e-27 125.9 119 53.8
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 6.7e-25 117.9 119 51.3
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 5.6e-24 114.8 212 37.3
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 4.8e-23 111.7 125 48.0
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 1.2e-21 107.1 121 48.8
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 7.6e-21 104.4 88 56.8
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 1.4e-19 100.1 124 46.8
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 6.7e-17 91.3 125 46.4
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 1.6e-15 86.7 150 38.7
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 4.8e-15 85.1 120 42.5
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 2.0e-13 79.7 119 35.3
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 1.3e-12 77.0 68 61.8


User provided reference genes

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