Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 7.6e-58 226.9 108 100.0
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 4.8e-36 154.5 90 88.9
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 2.7e-31 138.7 90 76.7
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 5.1e-30 134.4 87 70.1
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 4.3e-29 131.3 90 75.6
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.7e-28 129.4 90 70.0
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 1.1e-27 126.7 72 77.8
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 4.1e-27 124.8 79 73.4
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 4.1e-27 124.8 91 67.0
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 5.3e-27 124.4 81 71.6
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 2.0e-26 122.5 79 72.2
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 2.6e-26 122.1 92 62.0
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 2.6e-26 122.1 84 67.9
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 3.4e-26 121.7 81 69.1
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 4.5e-26 121.3 79 68.4
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 4.5e-26 121.3 79 70.9
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 7.7e-26 120.6 79 72.2
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 1.7e-25 119.4 79 70.9
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 2.2e-25 119.0 79 68.4
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 2.2e-25 119.0 79 68.4
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 2.2e-25 119.0 79 70.9
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 2.9e-25 118.6 79 65.8
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 2.9e-25 118.6 79 69.6
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 2.9e-25 118.6 79 67.1
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 5.0e-25 117.9 79 69.6
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 6.5e-25 117.5 79 68.4
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 8.5e-25 117.1 79 68.4
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 8.5e-25 117.1 79 67.1
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 8.5e-25 117.1 79 68.4
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 1.1e-24 116.7 87 59.8
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 1.1e-24 116.7 91 62.6
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 2.5e-24 115.5 79 65.8
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 2.5e-24 115.5 79 69.6
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 4.2e-24 114.8 79 64.6
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 5.5e-24 114.4 79 62.0
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 5.5e-24 114.4 81 63.0
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 5.5e-24 114.4 81 63.0
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 5.5e-24 114.4 73 69.9
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 7.2e-24 114.0 89 57.3
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 9.4e-24 113.6 72 69.4
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 9.4e-24 113.6 76 65.8
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 9.4e-24 113.6 79 63.3
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 9.4e-24 113.6 79 69.6
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 1.2e-23 113.2 79 65.8
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.2e-23 113.2 99 54.5
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 1.2e-23 113.2 79 67.1
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 1.6e-23 112.8 96 54.2
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 1.6e-23 112.8 79 64.6
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 1.6e-23 112.8 79 65.8
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 1.6e-23 112.8 79 68.4
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 2.1e-23 112.5 79 63.3
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 2.1e-23 112.5 77 64.9
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 2.7e-23 112.1 79 60.8
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 2.7e-23 112.1 79 65.8
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.7e-23 112.1 73 69.9
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 2.7e-23 112.1 72 68.1
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 4.7e-23 111.3 79 63.3
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 6.1e-23 110.9 72 68.1
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 6.1e-23 110.9 73 68.5
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 7.9e-23 110.5 72 69.4
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 1.0e-22 110.2 77 67.5
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 1.0e-22 110.2 79 63.3
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 1.8e-22 109.4 79 62.0
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 1.8e-22 109.4 76 64.5
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 2.3e-22 109.0 79 62.0
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 2.3e-22 109.0 81 60.5
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 2.3e-22 109.0 79 60.8
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 2.3e-22 109.0 72 65.3
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 3.9e-22 108.2 79 60.8
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 5.1e-22 107.8 79 62.0
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 1.1e-21 106.7 79 58.2
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 1.5e-21 106.3 79 59.5
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 2.6e-21 105.5 77 62.3
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 3.3e-21 105.1 79 64.6
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 3.3e-21 105.1 79 64.6
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 3.3e-21 105.1 79 64.6
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 4.4e-21 104.8 72 65.3
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 4.4e-21 104.8 89 52.8
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 7.4e-21 104.0 79 59.5
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 9.7e-21 103.6 79 62.0
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 9.7e-21 103.6 79 60.8
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 9.7e-21 103.6 79 60.8
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.3e-20 103.2 86 53.5
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 1.7e-20 102.8 79 58.2
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 2.2e-20 102.4 79 58.2
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 2.2e-20 102.4 79 60.8
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 2.2e-20 102.4 79 60.8
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 2.8e-20 102.1 79 59.5
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 2.8e-20 102.1 79 60.8
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 2.8e-20 102.1 79 59.5
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 2.8e-20 102.1 79 57.0
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 6.3e-20 100.9 79 59.5
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 8.2e-20 100.5 79 60.8
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 1.8e-19 99.4 72 61.1
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 1.8e-19 99.4 79 59.5
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 2.4e-19 99.0 79 62.0
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 2.4e-19 99.0 79 59.5
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 4.1e-19 98.2 79 60.8
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 9.1e-19 97.1 72 63.9
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 4.5e-18 94.7 83 50.6
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 5.9e-18 94.4 59 71.2
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 7.7e-18 94.0 79 57.0
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 1.0e-17 93.6 76 55.3
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 2.2e-17 92.4 62 67.7
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 1.9e-16 89.4 78 55.1
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 9.4e-16 87.0 71 50.7
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 4.7e-15 84.7 83 44.6
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 1.0e-14 83.6 78 52.6
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 1.1e-13 80.1 77 54.5
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 9.7e-13 77.0 88 46.6
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.3e-12 76.6 83 47.0
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 2.8e-12 75.5 79 45.6
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 2.8e-12 75.5 76 43.4
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 2.0e-10 69.3 79 48.1
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 1.3e-09 66.6 82 42.7
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 8.5e-09 63.9 73 43.8
Lsat_1_v5_gn_9_32780 Lactuca sativa HOM05D000379 ORTHO05D024309 1.8e-06 56.2 45 51.1


User provided reference genes

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