Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold217G42430 Striga asiatica HOM05D006182 ORTHO05D007236 0.0e+00 2704.1 1347 100.0
MSTRG.25113 Avicennia marina HOM05D006182 ORTHO05D007236 0.0e+00 1504.2 1372 59.0
SalBow7G1322 Salvia bowleyana HOM05D006182 ORTHO05D007236 0.0e+00 1289.2 1369 51.9
Migut.C00612 Erythranthe guttata HOM05D006182 ORTHO05D007236 6.1e-290 1001.5 1364 44.1
Actinidia22605 Actinidia chinensis HOM05D006182 ORTHO05D007236 2.4e-270 936.4 1390 41.0
Cc00_g16120 Coffea canephora HOM05D006182 ORTHO05D007236 3.2e-262 909.4 1392 39.4
vmacro21568 Vaccinium macrocarpon HOM05D006182 ORTHO05D007236 6.4e-255 885.2 1390 39.9
CAN.G210.12 Capsicum annuum HOM05D006182 ORTHO05D007236 1.1e-249 867.8 1386 38.4
PGSC0003DMG400031482 Solanum tuberosum HOM05D006182 ORTHO05D007236 2.4e-246 856.7 1381 38.5
Prupe.1G390200 Prunus persica HOM05D006182 ORTHO05D007236 9.6e-243 844.7 1408 39.3
Potri.002G129000 Populus trichocarpa HOM05D006182 ORTHO05D007236 6.2e-242 842.0 1386 38.5
Dinv35991 Davidia involucrata HOM05D006182 ORTHO05D007236 1.8e-241 840.5 1249 42.1
DCAR_012766 Daucus carota HOM05D006182 ORTHO05D007236 2.2e-239 833.6 1396 38.0
Manes.05G170000 Manihot esculenta HOM05D006182 ORTHO05D007236 8.4e-239 831.6 1398 37.5
CiPaw.15G064200 Carya illinoinensis HOM05D006182 ORTHO05D007236 1.1e-238 831.2 1394 37.7
Sopen07g009980 Solanum pennellii HOM05D006182 ORTHO05D007236 5.4e-238 828.9 1377 38.0
Rhsim06G0045000 Rhododendron simsii HOM05D006182 ORTHO05D007236 2.1e-237 827.0 1399 37.7
Lj4A50G37 Lonicera japonica HOM05D006182 ORTHO05D007236 1.0e-236 824.7 1399 39.0
QL02p006174 Quercus lobata HOM05D006182 ORTHO05D007236 3.9e-236 822.8 1427 37.6
Cfa018501 Carpinus fangiana HOM05D006182 ORTHO05D007236 1.9e-235 820.5 1387 37.4
MD08G1060500 Malus domestica HOM05D006182 ORTHO05D007236 1.8e-233 813.9 1402 38.0
Atru.chr13.613 Acer truncatum HOM05D006182 ORTHO05D007236 1.9e-230 803.9 1389 38.1
FvH4_5g30300 Fragaria vesca HOM05D006182 ORTHO05D007236 1.3e-226 791.2 1413 37.7
RcHm_v2.0_Chr7g0224651 Rosa chinensis HOM05D006182 ORTHO05D007236 5.3e-225 785.8 1403 37.4
FAN08G0368 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.0e-224 783.9 1419 37.7
Hma1.2p1_0951F.1_g240770 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 1.2e-221 774.6 1338 38.3
Nn6g32369 Nelumbo nucifera HOM05D006182 ORTHO05D007236 1.1e-217 761.5 1417 35.8
Thecc.08G014800 Theobroma cacao HOM05D006182 ORTHO05D007236 3.1e-217 760.0 1385 36.6
Haze_17575 Corylus avellana HOM05D006182 ORTHO05D007236 1.0e-215 755.0 1454 35.4
PGR031G1311 Punica granatum HOM05D006182 ORTHO05D007236 2.9e-215 753.4 1384 36.1
Duzib093G2194 Durio zibethinus HOM05D006182 ORTHO05D007236 8.8e-212 741.9 1392 35.6
ECA232G1194 Erigeron canadensis HOM05D006182 ORTHO05D007236 8.8e-212 741.9 1357 34.4
FAN18G2601 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.1e-211 741.5 1433 36.3
Peaxi162Scf00929g00711 Petunia axillaris HOM05D006182 ORTHO05D007236 3.3e-211 740.0 1168 39.1
CANSAT64G1322 Cannabis sativa HOM05D006182 ORTHO05D007236 5.7e-211 739.2 1423 36.5
HanXRQChr09g0268131 Helianthus annuus HOM05D006182 ORTHO05D007236 7.4e-211 738.8 1373 34.3
Aqoxy2G01750 Aquilegia oxysepala HOM05D006182 ORTHO05D007236 1.7e-210 737.6 1422 35.3
unitig_8.g5014 Utricularia gibba HOM05D006182 ORTHO05D007236 7.2e-206 722.2 1350 36.9
Sabra02G0101100 Salix brachista HOM05D006182 ORTHO05D007236 2.7e-205 720.3 1428 35.5
Sopen12g025610 Solanum pennellii HOM05D006182 ORTHO05D007236 4.8e-202 709.5 1375 34.7
MBI16_g27588_MAGBIO Magnolia biondii HOM05D006182 ORTHO05D007236 5.3e-201 706.1 1409 34.1
Nitab4.5_0003237g0020 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.2e-200 704.9 1194 37.9
Lj3g0019378 Lotus japonicus HOM05D006182 ORTHO05D007236 3.6e-197 693.3 1416 35.1
CsaV3_4G034020 Cucumis sativus L. HOM05D006182 ORTHO05D007236 8.0e-197 692.2 1404 34.8
Lsat_1_v5_gn_4_124380 Lactuca sativa HOM05D006182 ORTHO05D007236 1.8e-196 691.0 1352 32.8
Solyc12g062480.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 3.0e-196 690.3 1145 37.9
TWI56G0571 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 1.2e-192 678.3 1380 34.3
arahy.Tifrunner.gnm1.ann1.I266YZ Arachis hypogaea HOM05D006182 ORTHO05D007236 4.5e-192 676.4 1324 34.9
Psat4g135680 Pisum sativum HOM05D006182 ORTHO05D007236 7.7e-192 675.6 1403 34.2
arahy.Tifrunner.gnm1.ann1.903WAW Arachis hypogaea HOM05D006182 ORTHO05D007236 1.3e-191 674.9 1326 34.9
Gorai.009G018100 Gossypium raimondii HOM05D006182 ORTHO05D007236 2.2e-191 674.1 1387 34.3
Sed0017871 Sechium edule HOM05D006182 ORTHO05D007236 1.1e-190 671.8 1410 33.9
Gohir.A05G016750 Gossypium hirsutum HOM05D006182 ORTHO05D007236 9.4e-190 668.7 1384 34.1
Nitab4.5_0001611g0150 Nicotiana tabacum HOM05D006182 ORTHO05D007236 1.4e-188 664.8 1296 35.3
Phvul.011G175100 Phaseolus vulgaris HOM05D006182 ORTHO05D007236 6.8e-188 662.5 1394 34.3
EL10Ac1g01812 Beta vulgaris HOM05D006182 ORTHO05D007236 2.7e-184 650.6 1368 34.4
Gohir.D05G017700 Gossypium hirsutum HOM05D006182 ORTHO05D007236 1.0e-183 648.7 1384 34.4
PSO541G3468 Papaver somniferum HOM05D006182 ORTHO05D007236 1.9e-182 644.4 1409 33.4
MELO3C032401.2 Cucumis melo HOM05D006182 ORTHO05D007236 2.3e-175 620.9 1423 32.9
Solyc07g021120.3 Solanum lycopersicum HOM05D006182 ORTHO05D007236 5.6e-174 616.3 1082 37.7
ClCG05G019560 Citrullus lanatus HOM05D006182 ORTHO05D007236 2.1e-173 614.4 1357 33.1
PSO675G0403 Papaver somniferum HOM05D006182 ORTHO05D007236 2.1e-173 614.4 1377 32.1
Hund17608 Selenicereus undatus HOM05D006182 ORTHO05D007236 2.4e-169 600.9 1389 31.9
Oeu033637.2 Olea europaea HOM05D006182 ORTHO05D007236 2.0e-163 581.3 786 44.3
THA.LOC104816122 Tarenaya hassleriana HOM05D006182 ORTHO05D007236 3.4e-163 580.5 1381 32.1
TPR.G9412 Trifolium pratense HOM05D006182 ORTHO05D007236 1.2e-160 572.0 1235 33.7
Carub.0006s2813 Capsella rubella HOM05D006182 ORTHO05D007236 6.0e-160 569.7 1382 31.5
AL6G43320 Arabidopsis lyrata HOM05D006182 ORTHO05D007236 5.6e-158 563.1 1392 31.4
Aa31LG9G14980 Aethionema arabicum HOM05D006182 ORTHO05D007236 4.7e-157 560.1 1381 30.3
Sp6g07920 Schrenkiella parvula HOM05D006182 ORTHO05D007236 1.2e-155 555.4 1377 30.6
Ah.05g168900 Amaranthus hybridus HOM05D006182 ORTHO05D007236 1.5e-155 555.1 1394 31.4
BcaB01g01419 Brassica carinata HOM05D006182 ORTHO05D007236 2.9e-154 550.8 1379 31.4
C09p37620 Brassica napus HOM05D006182 ORTHO05D007236 1.1e-153 548.9 1372 30.5
BcaC04g20947 Brassica carinata HOM05D006182 ORTHO05D007236 5.4e-153 546.6 1371 30.4
BraA09t38510Z Brassica rapa HOM05D006182 ORTHO05D007236 2.7e-152 544.3 1380 30.0
BolC9t56593H Brassica oleracea HOM05D006182 ORTHO05D007236 6.0e-152 543.1 1376 30.4
A09p29430 Brassica napus HOM05D006182 ORTHO05D007236 2.3e-151 541.2 1370 29.9
AUR62031379 Chenopodium quinoa HOM05D006182 ORTHO05D007236 3.3e-150 537.3 1533 29.9
Thhalv10029299m.g Eutrema salsugineum HOM05D006182 ORTHO05D007236 1.4e-148 531.9 1374 30.8
ATR0225G007 Amborella trichopoda HOM05D006182 ORTHO05D007236 9.9e-147 525.8 1488 29.9
AT4G09680 Arabidopsis thaliana HOM05D006182 ORTHO05D007236 2.2e-138 498.0 1213 31.6
Oeu032242.1 Olea europaea HOM05D006182 ORTHO05D007236 4.4e-131 473.8 411 57.7
COL.COLO4_26443 Corchorus olitorius HOM05D006182 ORTHO05D007236 5.6e-126 456.8 1023 33.5
Zm00001eb311480 Zea mays HOM05D006182 ORTHO05D007236 1.1e-113 416.0 1393 26.6
Glyma.08G236800 Glycine max HOM05D006182 ORTHO05D007236 1.8e-108 398.7 972 32.5
Sc15g0006450 Simmondsia chinensis HOM05D006182 ORTHO05D007236 1.5e-102 379.0 940 31.4
Lalb_Chr04g0264231 Lupinus albus HOM05D006182 ORTHO05D007236 3.4e-99 367.9 474 43.7
FAN10G2690 Fragaria x ananassa HOM05D006182 ORTHO05D007236 1.4e-89 335.9 353 49.6
Cpa.g.c37201 Carica papaya HOM05D006182 ORTHO05D007236 1.6e-88 332.4 414 44.4
Sc15g0006460 Simmondsia chinensis HOM05D006182 ORTHO05D007236 3.9e-87 327.8 440 41.1
Ciclev10003312m.g Citrus clementina HOM05D006182 ORTHO05D007236 4.2e-81 307.8 851 31.3
FAN16G1533 Fragaria x ananassa HOM05D006182 ORTHO05D007236 5.7e-70 270.8 353 43.9
FAN19G3122 Fragaria x ananassa HOM05D006182 ORTHO05D007236 7.0e-68 263.8 281 47.7
HPP92_010557 Vanilla planifolia HOM05D006182 ORTHO05D007236 2.0e-67 262.3 736 28.1
Ciclev10003565m.g Citrus clementina HOM05D006182 ORTHO05D007236 2.1e-64 252.3 370 41.1
Os09g0376000 Oryza sativa ssp. japonica HOM05D006182 ORTHO05D007236 6.1e-64 250.8 466 35.2
Hma1.2p1_2764F.1_g328150 Hydrangea macrophylla HOM05D006182 ORTHO05D007236 2.7e-59 235.3 438 37.0
FAN17G1630 Fragaria x ananassa HOM05D006182 ORTHO05D007236 2.5e-57 228.8 265 45.3
Cpa.g.sc376.1 Carica papaya HOM05D006182 ORTHO05D007236 6.1e-56 224.2 630 29.5
TWI36G0305 Tripterygium wilfordii HOM05D006182 ORTHO05D007236 3.5e-51 208.4 400 35.2
Eucgr.F02378 Eucalyptus grandis HOM05D006182 ORTHO05D007236 5.9e-51 207.6 375 36.3
SEGI_31096 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 3.1e-47 195.3 673 26.6
GSVIVG01009571001 Vitis vinifera HOM05D006182 ORTHO05D007236 7.8e-43 180.6 269 40.9
Pp3c12_3560 Physcomitrium patens HOM05D006182 ORTHO05D007236 1.3e-42 179.9 562 26.5
FAN19G0764 Fragaria x ananassa HOM05D006182 ORTHO05D007236 3.0e-42 178.7 217 43.8
VMungo1127G0903 Vigna mungo HOM05D006182 ORTHO05D007236 3.1e-39 168.7 319 35.1
CDE02G1449 Ceratophyllum demersum HOM05D006182 ORTHO05D007236 4.0e-39 168.3 1317 21.3
Mapoly0037s0065 Marchantia polymorpha HOM05D006182 ORTHO05D007236 2.2e-37 162.5 512 27.1
GSVIVG01009572001 Vitis vinifera HOM05D006182 ORTHO05D007236 1.7e-34 152.9 114 65.8
unitig_19.g30005 Utricularia gibba HOM05D006182 ORTHO05D007236 1.2e-30 140.2 208 41.3
Nitab4.5_0003237g0010 Nicotiana tabacum HOM05D006182 ORTHO05D007236 5.8e-30 137.9 174 43.7
Nitab4.5_0001611g0140 Nicotiana tabacum HOM05D006182 ORTHO05D007236 3.8e-29 135.2 205 40.5
Lalb_Chr04g0264181 Lupinus albus HOM05D006182 ORTHO05D007236 8.6e-26 124.0 280 33.9
CARHR260630 Cardamine hirsuta HOM05D006182 ORTHO05D007236 1.9e-25 122.9 599 23.2
SMO356G0287 Selaginella moellendorffii HOM05D006182 ORTHO05D007236 2.8e-24 119.0 565 23.9
Lalb_Chr04g0264191 Lupinus albus HOM05D006182 ORTHO05D007236 6.4e-21 107.8 402 28.1
HPP92_010556 Vanilla planifolia HOM05D006182 ORTHO05D007236 2.1e-19 102.8 203 33.5
SEGI_35767 Sequoiadendron giganteum HOM05D006182 ORTHO05D007236 2.3e-18 99.4 273 30.4
Lalb_Chr04g0264211 Lupinus albus HOM05D006182 ORTHO05D007236 1.1e-17 97.1 195 31.3
SHI08237 Sapria himalayana HOM05D006182 ORTHO05D007236 2.1e-16 92.8 260 31.5
unitig_19.g30006 Utricularia gibba HOM05D006182 ORTHO05D007236 6.9e-15 87.8 150 39.3
Dinv00354 Davidia involucrata HOM05D006182 ORTHO05D007236 1.1e-12 80.5 57 61.4
Ca_05108_v3 Cicer arietinum L. HOM05D006182 ORTHO05D007236 2.4e-12 79.3 164 31.1
Dinv35387 Davidia involucrata HOM05D013161 ORTHO05D007236 2.5e-09 69.3 51 60.8
AagrBONN_evm.TU.Sc2ySwM_368.213 Anthoceros agrestis HOM05D014773 ORTHO05D007236 4.3e-09 68.6 419 21.7
Solyc07g021115.1 Solanum lycopersicum HOM05D006182 ORTHO05D007236 1.4e-07 63.5 79 40.5


User provided reference genes

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