Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 1.3e-235 819.3 392 100.0
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 2.3e-160 569.3 376 74.5
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 4.6e-153 545.0 374 70.3
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 1.8e-149 533.1 365 71.2
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 5.2e-149 531.6 363 70.8
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.1e-146 521.9 353 71.7
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 3.5e-145 518.8 362 68.5
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.0e-144 517.3 362 68.5
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.7e-144 516.5 353 69.4
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 3.0e-144 515.8 353 71.1
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 1.1e-143 513.8 353 71.1
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.5e-143 513.5 338 71.0
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.9e-143 513.1 348 71.3
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 2.8e-142 509.2 336 70.8
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.6e-142 508.8 372 68.3
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 4.7e-142 508.4 338 71.3
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 6.2e-142 508.1 338 72.8
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 4.0e-141 505.4 338 71.3
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 5.2e-141 505.0 365 68.5
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.0e-140 503.1 380 65.0
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 3.4e-140 502.3 365 68.2
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 5.8e-140 501.5 338 70.1
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 5.8e-140 501.5 338 70.7
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 9.9e-140 500.7 338 70.4
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 1.7e-139 500.0 359 66.9
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 3.8e-139 498.8 365 67.1
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 4.9e-139 498.4 359 67.7
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 4.9e-139 498.4 361 67.3
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 1.1e-138 497.3 365 64.4
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 1.4e-138 496.9 338 71.6
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 1.9e-138 496.5 338 71.0
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.9e-138 496.5 340 69.1
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 3.2e-138 495.7 363 66.7
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 3.2e-138 495.7 359 67.1
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 3.2e-138 495.7 362 67.4
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 4.2e-138 495.4 338 69.8
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 7.1e-138 494.6 338 69.2
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 7.1e-138 494.6 425 60.2
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 2.1e-137 493.0 340 69.7
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 2.7e-137 492.7 372 65.1
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 3.5e-137 492.3 392 63.3
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 4.6e-137 491.9 372 65.1
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 6.0e-137 491.5 387 62.8
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 7.8e-137 491.1 365 66.0
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.3e-136 490.3 358 67.9
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 3.0e-136 489.2 340 69.4
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 6.6e-136 488.0 340 69.4
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 6.6e-136 488.0 340 68.5
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 6.6e-136 488.0 340 68.5
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.9e-135 486.5 340 69.4
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 1.9e-135 486.5 365 65.2
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 4.3e-135 485.3 338 68.9
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 7.3e-135 484.6 340 68.2
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 9.6e-135 484.2 340 68.2
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.6e-134 483.4 353 66.3
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.6e-134 483.4 362 66.3
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 1.6e-134 483.4 338 68.6
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 4.8e-134 481.9 431 59.6
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 3.1e-133 479.2 340 67.1
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 5.3e-133 478.4 350 67.7
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.5e-132 476.9 358 66.8
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 1.5e-132 476.9 323 71.5
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 3.4e-132 475.7 363 63.6
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.1e-130 470.7 345 66.7
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 4.6e-129 465.3 322 70.2
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 6.0e-129 464.9 313 70.6
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 7.9e-129 464.5 338 63.3
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 1.3e-128 463.8 402 59.0
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 3.0e-128 462.6 382 62.8
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.5e-127 460.3 380 61.8
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 1.4e-125 453.8 338 66.3
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 5.3e-125 451.8 387 59.9
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 7.6e-124 448.0 339 65.8
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 7.6e-124 448.0 294 71.1
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 3.8e-123 445.7 362 58.8
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 8.4e-123 444.5 339 63.7
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 3.9e-120 435.6 340 64.1
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 4.3e-119 432.2 299 69.9
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 3.7e-118 429.1 294 68.7
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.7e-113 412.9 321 63.6
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.8e-110 402.9 338 62.1
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 2.0e-108 396.7 295 66.1
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.8e-107 392.5 338 59.8
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 8.2e-102 374.8 363 55.9
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 3.1e-93 346.3 251 66.1
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 5.7e-87 325.5 343 47.8
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 7.4e-87 325.1 335 46.6
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 2.2e-86 323.6 339 46.0
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 6.3e-86 322.0 338 47.9
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 2.9e-83 313.2 226 65.9
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 4.7e-81 305.8 232 63.4
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 8.5e-75 285.0 242 59.1
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 8.0e-57 225.3 125 82.4
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 5.2e-56 222.6 173 61.8
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.5e-55 221.1 181 64.6
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 1.4e-45 188.0 112 75.9
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 4.1e-45 186.4 361 34.3
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.5e-44 183.3 144 56.2
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 5.2e-40 169.5 326 33.1
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 2.4e-37 160.6 397 28.2
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-37 159.5 198 40.9
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 2.1e-33 147.5 121 58.7
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 1.7e-30 137.9 133 55.6
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.2e-30 137.5 107 65.4
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 1.1e-29 135.2 114 57.9
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 8.1e-25 119.0 348 29.0
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 9.3e-21 105.5 90 62.2
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 3.3e-18 97.1 65 69.2
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 4.0e-16 90.1 87 48.3
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 3.4e-15 87.0 73 53.4
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 4.5e-15 86.7 103 43.7
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 6.7e-11 72.8 41 70.7
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 6.7e-11 72.8 42 81.0
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 7.6e-07 59.3 39 64.1
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 3.8e-06 57.0 34 73.5


User provided reference genes

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