Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold216G42382 Striga asiatica HOM05D003057 ORTHO05D012636 9.0e-81 303.5 153 100.0
SGA_v2.0_scaffold295G47505 Striga asiatica HOM05D003057 ORTHO05D012636 1.1e-57 226.9 156 76.3
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 5.5e-54 214.5 142 76.8
SGA_v2.0_scaffold116G32300 Striga asiatica HOM05D003057 ORTHO05D012636 1.8e-49 199.5 136 77.2
SGA_v2.0_scaffold35G14135 Striga asiatica HOM05D003057 ORTHO05D012636 3.1e-49 198.7 138 72.5
SGA_v2.0_scaffold57G20118 Striga asiatica HOM05D003057 ORTHO05D012636 8.6e-39 164.1 110 76.4
SGA_v2.0_scaffold306G48017 Striga asiatica HOM05D003057 ORTHO05D012636 6.6e-31 137.9 103 70.9
SGA_v2.0_scaffold21G09540 Striga asiatica HOM05D003057 ORTHO05D012636 4.3e-30 135.2 91 75.8
SGA_v2.0_scaffold165G38202 Striga asiatica HOM05D003057 ORTHO05D012636 9.5e-30 134.0 99 72.7
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 2.6e-27 125.9 78 79.5
SGA_v2.0_scaffold1179G53858 Striga asiatica HOM05D003057 ORTHO05D012636 4.1e-25 118.6 82 73.2
SGA_v2.0_scaffold26G11423 Striga asiatica HOM05D003057 ORTHO05D012636 2.5e-22 109.4 79 74.7
SGA_v2.0_scaffold10G05245 Striga asiatica HOM05D003057 ORTHO05D012636 5.4e-17 91.7 71 67.6
SGA_v2.0_scaffold17G08167 Striga asiatica HOM05D003057 ORTHO05D012636 3.5e-16 89.0 51 84.3
SGA_v2.0_scaffold10G05322 Striga asiatica HOM05D003057 ORTHO05D012636 1.7e-15 86.7 67 65.7
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 5.6e-14 81.6 113 43.4
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.2e-13 80.5 83 48.2
SGA_v2.0_scaffold77G25207 Striga asiatica HOM05D000001 ORTHO05D000003 4.0e-12 75.5 53 73.6
Sp3g10110 Schrenkiella parvula HOM05D036201 ORTHO05D012636 2.0e-11 73.2 85 44.7
SGA_v2.0_scaffold165G38204 Striga asiatica HOM05D003057 ORTHO05D012636 6.4e-10 68.2 52 69.2
SGA_v2.0_scaffold17G08076 Striga asiatica HOM05D003057 ORTHO05D012636 6.4e-10 68.2 52 69.2
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 1.9e-09 66.6 103 41.7
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 1.9e-09 66.6 85 44.7
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 1.9e-09 66.6 85 44.7
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 1.9e-09 66.6 85 44.7
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 2.4e-09 66.2 154 33.1
TPR.G5033 Trifolium pratense HOM05D003057 ORTHO05D003904 9.2e-09 64.3 99 43.4
Psat6g044720 Pisum sativum HOM05D003057 ORTHO05D003904 6.0e-08 61.6 75 46.7
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 6.0e-08 61.6 87 44.8
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-07 60.5 93 36.6
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.3e-07 59.7 91 37.4
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 6.6e-07 58.2 84 36.9
COL.COLO4_06538 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.6e-07 58.2 100 35.0
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.6e-07 58.2 87 40.2
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.6e-07 58.2 87 40.2
PSO675G6041 Papaver somniferum HOM05D003057 ORTHO05D003904 8.6e-07 57.8 86 38.4
Psat0s1492g0080 Pisum sativum HOM05D003057 ORTHO05D012636 8.6e-07 57.8 62 45.2
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.6e-07 57.8 87 40.2
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-06 57.4 86 44.2
SGA_v2.0_scaffold10G05324 Striga asiatica HOM05D003057 ORTHO05D012636 1.1e-06 57.4 39 71.8
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.9e-06 56.6 92 35.9
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.5e-06 56.2 87 40.2
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.3e-06 54.7 90 36.7
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 7.3e-06 54.7 105 32.4
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.6e-06 54.3 90 36.7


User provided reference genes

Program Settings