Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 3.8e-148 528.1 258 100.0
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 1.4e-65 253.8 208 66.3
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 9.6e-59 231.1 222 57.7
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 3.2e-30 136.3 234 36.8
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 1.1e-25 121.3 241 35.3
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 2.4e-25 120.2 215 37.2
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 8.5e-23 111.7 223 32.7
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 1.9e-22 110.5 234 32.5
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 3.2e-22 109.8 235 31.9
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 9.4e-22 108.2 221 32.6
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 4.7e-21 105.9 55 90.9
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 7.5e-19 98.6 258 28.7
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.8e-17 94.0 266 28.6
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 4.1e-17 92.8 240 29.6
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 7.0e-17 92.0 265 27.5
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 3.5e-16 89.7 252 28.6
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 5.9e-16 89.0 259 29.0
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 5.9e-16 89.0 230 29.1
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.0e-15 88.2 225 28.4
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.3e-15 87.8 230 29.6
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 2.9e-15 86.7 233 25.8
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 2.9e-15 86.7 241 31.1
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 5.0e-15 85.9 229 29.7
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 5.0e-15 85.9 223 30.0
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 6.5e-15 85.5 246 26.0
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.1e-14 84.7 228 28.1
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 2.5e-14 83.6 244 25.4
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 3.2e-14 83.2 223 26.0
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 9.4e-14 81.6 221 26.2
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 2.1e-13 80.5 253 24.9
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 2.7e-13 80.1 230 28.3
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 2.7e-13 80.1 239 28.5
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 4.7e-13 79.3 288 27.1
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 6.1e-13 79.0 242 28.9
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 8.0e-13 78.6 232 27.6
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 2.3e-12 77.0 228 26.3
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.3e-12 77.0 238 28.2
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 3.0e-12 76.6 232 27.2
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 5.2e-12 75.9 249 25.7
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 6.8e-12 75.5 242 26.4
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 8.8e-12 75.1 228 27.2
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 8.8e-12 75.1 232 26.3
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 1.5e-11 74.3 226 28.8
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 1.5e-11 74.3 244 26.6
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 1.5e-11 74.3 257 27.2
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 9.8e-11 71.6 232 26.7
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.3e-10 71.2 248 26.6
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 1.3e-10 71.2 229 24.9
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 1.7e-10 70.9 240 24.2
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 1.7e-10 70.9 140 33.6
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 4.8e-10 69.3 229 26.6
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 6.3e-10 68.9 140 32.9
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 2.4e-09 67.0 247 25.9
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 4.1e-09 66.2 217 30.0
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 5.4e-09 65.9 191 27.2
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 7.0e-09 65.5 230 27.0
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 2.0e-08 63.9 239 24.7
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 3.5e-08 63.2 95 37.9
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 4.5e-08 62.8 231 26.4
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 8.5e-07 58.5 217 25.3
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 1.9e-06 57.4 243 22.6
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 4.2e-06 56.2 239 23.8
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 5.5e-06 55.8 221 26.2


User provided reference genes

Program Settings