Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold211G42131 Striga asiatica HOM05D009828 ORTHO05D403207 7.8e-226 786.9 441 100.0
SGA_v2.0_scaffold283G46983 Striga asiatica HOM05D009828 ORTHO05D013311 2.7e-13 80.9 73 64.4
SGA_v2.0_scaffold57G20238 Striga asiatica HOM05D009828 ORTHO05D013311 3.4e-11 73.9 77 59.7
SGA_v2.0_scaffold46G17479 Striga asiatica HOM05D009828 ORTHO05D013311 6.3e-10 69.7 82 45.1
SGA_v2.0_scaffold55G19890 Striga asiatica HOM05D009828 ORTHO05D013311 2.4e-09 67.8 72 47.2
SGA_v2.0_scaffold15G07208 Striga asiatica HOM05D009828 ORTHO05D013311 9.2e-09 65.9 72 47.2
SGA_v2.0_scaffold36G14526 Striga asiatica HOM05D009828 ORTHO05D013311 1.2e-08 65.5 72 45.8
RcHm_v2.0_Chr6g0276491 Rosa chinensis HOM05D000017 ORTHO05D000013 5.9e-08 63.2 126 32.5
SGA_v2.0_scaffold31G12735 Striga asiatica HOM05D009828 ORTHO05D013311 7.7e-08 62.8 76 38.2
SGA_v2.0_scaffold4G02358 Striga asiatica HOM05D009828 ORTHO05D013311 1.3e-07 62.0 107 32.7
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-07 61.6 98 36.7
RcHm_v2.0_Chr4g0392221 Rosa chinensis HOM05D000017 ORTHO05D000013 3.8e-07 60.5 125 30.4
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.0e-07 60.1 84 39.3
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.0e-07 60.1 84 39.3
CANSAT25G0975 Cannabis sativa HOM05D000017 ORTHO05D000013 8.6e-07 59.3 141 31.9
SGA_v2.0_scaffold211G42136 Striga asiatica HOM05D009828 ORTHO05D013311 8.6e-07 59.3 51 52.9
CANSAT21G0768 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.9 132 34.1
CANSAT78G0912 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.9 102 37.3
FvH4_5g24521 Fragaria vesca HOM05D000017 ORTHO05D009451 4.3e-06 57.0 125 32.0
Prupe.4G046500 Prunus persica HOM05D000017 ORTHO05D000013 4.3e-06 57.0 95 36.8
CANSAT54G2672 Cannabis sativa HOM05D000017 ORTHO05D000013 7.3e-06 56.2 141 28.4


User provided reference genes

Program Settings