Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold211G42129 Striga asiatica HOM05D035109 ORTHO05D404020 1.9e-99 365.9 194 100.0
SGA_v2.0_scaffold58G20522 Striga asiatica HOM05D000194 ORTHO05D000069 3.0e-20 102.8 89 69.7
SGA_v2.0_scaffold238G43950 Striga asiatica HOM05D006593 ORTHO05D008512 4.3e-11 72.4 46 80.4
QL11p044710 Quercus lobata HOM05D000194 ORTHO05D000069 3.4e-08 62.8 76 52.6
Sopen01g051890 Solanum pennellii HOM05D000194 ORTHO05D000069 1.3e-07 60.8 80 48.8
QL04p027572 Quercus lobata HOM05D000056 ORTHO05D000019 1.7e-07 60.5 76 51.3
Cfa004988 Carpinus fangiana HOM05D000194 ORTHO05D000069 2.9e-07 59.7 108 45.4
RcHm_v2.0_Chr6g0264701 Rosa chinensis HOM05D000194 ORTHO05D000069 2.9e-07 59.7 87 48.3
Dinv42055 Davidia involucrata HOM05D000194 ORTHO05D000069 3.8e-07 59.3 76 51.3
Lsat_1_v5_gn_5_119080 Lactuca sativa HOM05D000194 ORTHO05D000069 3.8e-07 59.3 82 53.7
Solyc01g109700.3 Solanum lycopersicum HOM05D000194 ORTHO05D000069 3.8e-07 59.3 80 47.5
vmacro02094 Vaccinium macrocarpon HOM05D000194 ORTHO05D000069 3.8e-07 59.3 135 35.6
FAN20G0474 Fragaria x ananassa HOM05D000194 ORTHO05D000069 4.9e-07 58.9 87 48.3
MD10G1074000 Malus domestica HOM05D000194 ORTHO05D000069 4.9e-07 58.9 101 42.6
FvH4_2g09030 Fragaria vesca HOM05D000194 ORTHO05D000069 6.4e-07 58.5 87 48.3
FAN24G1806 Fragaria x ananassa HOM05D000194 ORTHO05D000069 6.4e-07 58.5 87 48.3
FAN27G2861 Fragaria x ananassa HOM05D000194 ORTHO05D000069 6.4e-07 58.5 87 48.3
MD05G1065100 Malus domestica HOM05D000194 ORTHO05D000069 6.4e-07 58.5 80 47.5
SEGI_36454 Sequoiadendron giganteum HOM05D000194 ORTHO05D000069 6.4e-07 58.5 36 80.6
SGA_v2.0_scaffold58G20596 Striga asiatica HOM05D035109 ORTHO05D045336 8.4e-07 58.2 49 65.3
CiPaw.06G134700 Carya illinoinensis HOM05D000194 ORTHO05D000069 1.1e-06 57.8 80 45.0
FAN15G2770 Fragaria x ananassa HOM05D000194 ORTHO05D000069 1.1e-06 57.8 87 47.1
Ca_20883_v3 Cicer arietinum L. HOM05D000194 ORTHO05D000069 1.9e-06 57.0 79 53.2
Lj9C373G7 Lonicera japonica HOM05D000194 ORTHO05D000069 1.9e-06 57.0 81 49.4
Prupe.8G095700 Prunus persica HOM05D000194 ORTHO05D000069 1.9e-06 57.0 80 47.5
Ah.01g019290 Amaranthus hybridus HOM05D000194 ORTHO05D000069 2.4e-06 56.6 99 41.4
Hma1.2p1_0066F.1_g036290 Hydrangea macrophylla HOM05D000194 ORTHO05D000069 2.4e-06 56.6 80 46.2
Actinidia34350 Actinidia chinensis HOM05D000194 ORTHO05D000069 3.2e-06 56.2 80 45.0
Rhsim11G0178500 Rhododendron simsii HOM05D000194 ORTHO05D000069 3.2e-06 56.2 77 50.6
Sopen02g013710 Solanum pennellii HOM05D000194 ORTHO05D000069 4.2e-06 55.8 40 72.5
PGSC0003DMG400015482 Solanum tuberosum HOM05D000194 ORTHO05D000069 4.2e-06 55.8 40 72.5
SalBow6G2117 Salvia bowleyana HOM05D000194 ORTHO05D000069 7.1e-06 55.1 84 52.4
CANSAT01G3116 Cannabis sativa HOM05D000194 ORTHO05D000069 9.3e-06 54.7 77 48.1
Cpa.g.sc62.160 Carica papaya HOM05D000194 ORTHO05D000069 9.3e-06 54.7 80 46.2
Phvul.009G023500 Phaseolus vulgaris HOM05D000194 ORTHO05D000069 9.3e-06 54.7 82 48.8
Hund06239 Selenicereus undatus HOM05D000194 ORTHO05D000069 9.3e-06 54.7 79 48.1
Solyc02g062690.3 Solanum lycopersicum HOM05D000194 ORTHO05D000069 9.3e-06 54.7 66 51.5


User provided reference genes

Program Settings