Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold211G42115 Striga asiatica HOM05D018612 ORTHO05D011912 1.1e-91 340.1 188 100.0
SGA_v2.0_scaffold223G42819 Striga asiatica HOM05D018612 ORTHO05D011912 1.2e-69 266.9 215 67.0
SGA_v2.0_scaffold158G37502 Striga asiatica HOM05D018612 ORTHO05D011912 2.6e-69 265.8 215 67.0
SGA_v2.0_scaffold136G35019 Striga asiatica HOM05D018612 ORTHO05D011912 2.0e-66 256.1 215 65.6
SGA_v2.0_scaffold279G46774 Striga asiatica HOM05D018612 ORTHO05D011912 1.0e-49 200.7 103 89.3
SGA_v2.0_scaffold5187G54608 Striga asiatica HOM05D018612 ORTHO05D011912 8.3e-44 181.0 91 89.0
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 1.3e-17 94.0 152 40.1
SGA_v2.0_scaffold147G36332 Striga asiatica HOM05D013095 ORTHO05D011912 4.8e-15 85.5 81 51.9
SGA_v2.0_scaffold85G26590 Striga asiatica HOM05D013095 ORTHO05D011912 4.8e-15 85.5 81 51.9
SGA_v2.0_scaffold11G05582 Striga asiatica HOM05D018166 ORTHO05D011912 2.4e-14 83.2 143 41.3
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 1.2e-13 80.9 91 40.7
SGA_v2.0_scaffold96G29033 Striga asiatica HOM05D018166 ORTHO05D011912 4.5e-13 79.0 130 36.2
SGA_v2.0_scaffold355G49765 Striga asiatica HOM05D013095 ORTHO05D011912 5.8e-13 78.6 81 49.4
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 9.9e-13 77.8 91 40.7
SGA_v2.0_scaffold85G26669 Striga asiatica HOM05D018166 ORTHO05D011912 9.9e-13 77.8 89 41.6
SGA_v2.0_scaffold21G09368 Striga asiatica HOM05D018166 ORTHO05D011912 1.7e-12 77.0 130 36.2
SGA_v2.0_scaffold3G01620 Striga asiatica HOM05D018395 ORTHO05D011912 2.9e-12 76.3 87 41.4
SGA_v2.0_scaffold99G29481 Striga asiatica HOM05D018166 ORTHO05D011912 4.9e-12 75.5 130 35.4
SGA_v2.0_scaffold117G32327 Striga asiatica HOM05D018166 ORTHO05D011912 1.2e-10 70.9 130 33.1
SalBow7G3411 Salvia bowleyana HOM05D009427 ORTHO05D009453 1.1e-08 64.3 117 39.3
SalBow7G0742 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.3e-08 62.4 146 29.5
COL.COLO4_30330 Corchorus olitorius HOM05D015200 ORTHO05D000309 9.6e-08 61.2 96 38.5
SalBow6G6190 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.3e-07 60.8 147 30.6
SGA_v2.0_scaffold6G03468 Striga asiatica HOM05D018395 ORTHO05D011912 1.3e-07 60.8 95 38.9
Nitab4.5_0001487g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.6e-07 60.5 107 34.6
SalBow1G3139 Salvia bowleyana HOM05D009427 ORTHO05D009453 1.6e-07 60.5 124 29.8
SalBow8G4103 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.6e-07 60.5 143 29.4
Nitab4.5_0007410g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.7e-07 59.3 125 34.4
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 6.2e-07 58.5 94 42.6
SalBow4G1662 Salvia bowleyana HOM05D001898 ORTHO05D002580 1.1e-06 57.8 134 32.1
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 1.4e-06 57.4 74 40.5
COL.COLO4_15560 Corchorus olitorius HOM05D015200 ORTHO05D000309 1.4e-06 57.4 74 40.5
SalBow1G4300 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.8e-06 57.0 109 29.4
SalBow3G3378 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.8e-06 57.0 132 27.3
Nitab4.5_0001931g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.4e-06 56.6 107 33.6
Nitab4.5_0009420g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.4e-06 56.6 80 33.8
Nitab4.5_0011837g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.4e-06 56.6 94 35.1
SalBow1G0840 Salvia bowleyana HOM05D009427 ORTHO05D009453 2.4e-06 56.6 107 36.4
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.1e-06 56.2 68 38.2
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 3.1e-06 56.2 56 50.0
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 3.1e-06 56.2 62 43.5
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 3.1e-06 56.2 56 50.0
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 56.2 103 32.0
Lsat_1_v5_gn_3_72860 Lactuca sativa HOM05D009585 ORTHO05D000309 4.0e-06 55.8 62 43.5
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 4.0e-06 55.8 77 39.0
SalBow4G1975 Salvia bowleyana HOM05D027806 ORTHO05D009453 4.0e-06 55.8 73 32.9
SalBow5G5058 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.0e-06 55.8 79 38.0
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 5.3e-06 55.5 62 43.5
Nitab4.5_0004146g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.3e-06 55.5 144 28.5
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-06 55.5 80 35.0
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-06 55.5 80 35.0
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-06 55.5 80 35.0
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-06 55.5 80 37.5
SalBow6G5997 Salvia bowleyana HOM05D008544 ORTHO05D010680 5.3e-06 55.5 61 44.3
Lsat_1_v5_gn_9_115701 Lactuca sativa HOM05D009585 ORTHO05D000309 6.9e-06 55.1 86 37.2
Nitab4.5_0000131g0190 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.9e-06 55.1 60 40.0
Nitab4.5_0004598g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.9e-06 55.1 100 34.0
SalBow7G0588 Salvia bowleyana HOM05D009427 ORTHO05D009453 6.9e-06 55.1 56 46.4
Nitab4.5_0000036g0280 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.0e-06 54.7 115 29.6
SalBow3G1429 Salvia bowleyana HOM05D008808 ORTHO05D009453 9.0e-06 54.7 66 39.4
SalBow6G5285 Salvia bowleyana HOM05D009427 ORTHO05D009453 9.0e-06 54.7 104 30.8
SalBow8G1086 Salvia bowleyana HOM05D008544 ORTHO05D010680 9.0e-06 54.7 82 40.2


User provided reference genes

Program Settings