Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 3.0e-91 338.6 179 100.0
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 3.7e-33 145.6 205 48.3
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 1.1e-32 144.1 138 56.5
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 4.1e-32 142.1 189 50.8
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 3.8e-22 109.0 122 46.7
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 3.8e-22 109.0 176 40.3
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 1.5e-21 107.1 115 44.3
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 1.9e-21 106.7 125 44.8
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 2.5e-21 106.3 115 45.2
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 2.5e-21 106.3 108 48.1
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 4.2e-21 105.5 115 45.2
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 4.2e-21 105.5 100 51.0
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 5.5e-21 105.1 136 40.4
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 7.2e-21 104.8 124 44.4
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 9.4e-21 104.4 102 50.0
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 2.1e-20 103.2 115 44.3
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 2.1e-20 103.2 122 44.3
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 2.1e-20 103.2 121 44.6
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 2.1e-20 103.2 110 47.3
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 2.7e-20 102.8 124 41.9
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 3.6e-20 102.4 103 48.5
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 4.7e-20 102.1 121 43.8
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 4.7e-20 102.1 120 44.2
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 4.7e-20 102.1 101 49.5
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 8.0e-20 101.3 128 44.5
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 1.0e-19 100.9 119 44.5
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.0e-19 100.9 175 38.3
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.0e-19 100.9 126 46.0
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 1.0e-19 100.9 115 43.5
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 1.4e-19 100.5 184 38.0
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 1.8e-19 100.1 117 45.3
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 1.8e-19 100.1 101 47.5
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 1.8e-19 100.1 107 44.9
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 1.8e-19 100.1 107 44.9
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 1.8e-19 100.1 107 44.9
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 2.3e-19 99.8 95 50.5
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 2.3e-19 99.8 116 43.1
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 3.0e-19 99.4 137 40.1
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 4.0e-19 99.0 121 45.5
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 4.0e-19 99.0 115 43.5
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 4.0e-19 99.0 98 49.0
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 5.2e-19 98.6 120 41.7
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 5.2e-19 98.6 155 36.1
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 5.2e-19 98.6 113 44.2
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 5.2e-19 98.6 118 44.1
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 5.2e-19 98.6 124 42.7
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 6.8e-19 98.2 94 48.9
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 8.8e-19 97.8 119 42.9
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 8.8e-19 97.8 123 41.5
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 8.8e-19 97.8 71 59.2
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 8.8e-19 97.8 182 35.2
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.2e-18 97.4 114 43.0
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 1.2e-18 97.4 100 47.0
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 1.5e-18 97.1 73 56.2
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 2.0e-18 96.7 165 37.0
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 2.0e-18 96.7 88 52.3
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 2.0e-18 96.7 99 44.4
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 2.6e-18 96.3 113 43.4
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 2.6e-18 96.3 71 57.7
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 2.6e-18 96.3 113 44.2
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 3.4e-18 95.9 131 40.5
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 3.4e-18 95.9 96 46.9
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 3.4e-18 95.9 122 43.4
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 4.4e-18 95.5 123 39.8
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 5.7e-18 95.1 106 46.2
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 7.5e-18 94.7 73 56.2
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 7.5e-18 94.7 73 56.2
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 7.5e-18 94.7 73 58.9
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 9.8e-18 94.4 171 34.5
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 9.8e-18 94.4 60 66.7
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 9.8e-18 94.4 130 37.7
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 1.3e-17 94.0 68 58.8
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 1.3e-17 94.0 68 58.8
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 1.3e-17 94.0 68 58.8
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 1.7e-17 93.6 77 57.1
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 2.2e-17 93.2 94 48.9
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 2.2e-17 93.2 94 47.9
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 2.8e-17 92.8 107 44.9
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 2.8e-17 92.8 97 44.3
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 3.7e-17 92.4 166 33.7
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 3.7e-17 92.4 108 42.6
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 3.7e-17 92.4 95 45.3
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 8.3e-17 91.3 95 43.2
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.3e-17 91.3 95 43.2
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.3e-17 91.3 95 43.2
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 8.3e-17 91.3 95 43.2
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 8.3e-17 91.3 177 32.8
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 1.1e-16 90.9 116 40.5
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.1e-16 90.9 95 43.2
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 1.1e-16 90.9 149 34.9
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 1.4e-16 90.5 97 46.4
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 2.4e-16 89.7 121 39.7
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.4e-16 89.7 95 43.2
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 7.0e-16 88.2 123 39.8
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 7.0e-16 88.2 89 46.1
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 1.2e-15 87.4 94 44.7
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 1.2e-15 87.4 80 50.0
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.6e-15 87.0 131 37.4
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 1.6e-15 87.0 67 50.7
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 5.9e-15 85.1 78 50.0
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 5.9e-15 85.1 78 50.0
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 5.9e-15 85.1 78 50.0
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 1.0e-14 84.3 60 58.3
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 1.0e-14 84.3 79 49.4
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 1.0e-14 84.3 79 49.4
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 1.3e-14 84.0 77 51.9
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 1.7e-14 83.6 115 43.5
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 2.9e-14 82.8 88 44.3
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 2.9e-14 82.8 60 56.7
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 3.8e-14 82.4 68 55.9
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 5.0e-14 82.0 79 46.8
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 6.5e-14 81.6 88 44.3
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 6.5e-14 81.6 89 42.7
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 6.5e-14 81.6 88 44.3
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 6.5e-14 81.6 137 35.0
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 8.5e-14 81.3 137 35.0
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 4.2e-13 79.0 136 33.8
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 4.2e-13 79.0 57 59.6
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 9.4e-13 77.8 59 52.5
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.4e-11 73.9 88 40.9
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.4e-11 73.9 76 44.7
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 8.8e-11 71.2 72 45.8
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 3.4e-10 69.3 97 35.1
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 4.4e-10 68.9 83 41.0
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 1.7e-09 67.0 51 51.0
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 7.0e-08 61.6 112 31.2
SGA_v2.0_scaffold134G34742 Striga asiatica HOM05D005893 ORTHO05D007295 7.0e-08 61.6 72 51.4
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 9.1e-08 61.2 49 49.0
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 3.5e-07 59.3 57 42.1
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 2.3e-06 56.6 88 35.2


User provided reference genes

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